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The map label for this gene is bepC [H]

Identifier: 218533037

GI number: 218533037

Start: 5530866

End: 5532332

Strand: Reverse

Name: bepC [H]

Synonym: Mchl_5161

Alternate gene names: 218533037

Gene position: 5532332-5530866 (Counterclockwise)

Preceding gene: 218533038

Following gene: 218533036

Centisome position: 95.75

GC content: 68.98

Gene sequence:

>1467_bases
ATGCACCGGAGCGGACACGGCAGTGCGGCGGGACGGCATATCGAGAAACCGCAAGGGCTGATCGACGTGAAAGAACGGAA
CCCTGCGGCGCGGTCCGCGCTTCGGCTGGCTGGCGCCGTCGTCTCGGCACTGGCTGTCGCAAGTCCGGCGGCTGCCGAGA
CCCTCGAGAGCGCGTTGTCCCGCGCCTATCAGGCCAACCCGGCGCTGAACGCGGCGCGGGCGAACCTGCGCGCGACCGAC
GAGGATGTGAATCGCTTCCAGGCCGGCTACCGACCGAACGCCGCGCTTTCGGCCGACATCGGCATCCAGCAATTCCAGGG
TAAGATCGGCGGCGTCGGCGCCAGCGGGCCGATCAATCTCACGACTCGCCCGGGCGGCGCCGGCCTGACCATCAACCAGA
ACGTCTTCGACGGCTTTCAGACCGACAACCGGGTGCGCGCGGCCGAATCGACCGTGCTCAGCACGCGGGAAGGCCTGCGC
CAGACCGAGATGAACACGCTGTTCAACGCCGCTCAGGCCTACATGAACGTCCTGAGCGACACGGCGACGTTGGAGCTTCA
GCGCAACAACGTCGAGGTGCTCGAAGAGCAGCTTCGTCAGACTCGCGACCGCTTCAATGTCGGCGAGGTGACCCGCACCG
ACGTCGCCCAGGCCGAAGCACGCCTCGCCGGCGCCCGCTCCCAGGTGAGCGCGGCGGAGGCGGCCCTGCGTGCCTCGATC
GGCATCTTCCGCCAGATCGTCGGCGTCGAACCGCGCCAGCTCGCCCCCGGGCGCCCGCTCGACCGCTACGTGCCGGCCTC
GCTCGATCAGGCGATTCTCATCGGCCTGAAGGAGCATCCGCAGATCCTCGCCTCGCTGCACGCCGTGGACGTGGCGGAGC
TGCAGGTGAAGGTGAACGAAGGCGCGCTCTATCCGCAGGCGCAGATCACCGGAGCGGTGCAGCAGCGGTACGATCAGCAG
TTCCCCGGCGACAACGGCGTCACCGCCTCCATCGTCGGGCGGGTCAACATTCCGCTCTATCAGGGTGGCGCCGAATACGC
CGCGATCCGGCAGGCCAAGGAGAATGTCGGGCGCGCCCGCCTCGTCGCCGACCAGGACCGCGACACCATCCGCGCCTCGA
TCGTGCGGACCTGGGGCAATCTCGAAGCCTCGAAGGCGCAGGTGATCGCCTCGCAGGCGCAGGTTCAGGCCAACGAGGTG
GCGCTGAACGGCGTGCGTGAGGAGGCTCGCGTCGGCCAGCGCACCACCCTCGACGTACTGAACGCGCAGCAGGAACTGCT
CTCCGCGCGCGTCGCCCTGATCCGCGCCCAGCGCGACCGCGTGGTGAACTCCTACGATGTCGTCCAGGCCGTCGGCCGGC
TCACCGTCCGCTTCACCAGCCTGCCGGTCACCCCGTACAGCGCCCGCGAACATCTCGATCAGGTGCGCGATCTCTGGTTC
GGCCTGCGCACCCCCGACGGGCGCTGA

Upstream 100 bases:

>100_bases
GCTAGCCATTCCATCGCATGGGTGTGCATGCGGCATCCCTGTCGCGACCCTCACGGTGCGGGTCGTCCTGCAGATGTCCT
CCGGGGCATTTGCTGGGGCG

Downstream 100 bases:

>100_bases
CAGCCTCGCTGCGGACGACGTTTTCCTGTTGGCCGGCGGCGGACCATGGTTGATGCCGGGCAAGGCGATGCAATAGTTCG
TTAACCAAGTCATCGTCTTG

Product: type I secretion outer membrane protein, TolC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MHRSGHGSAAGRHIEKPQGLIDVKERNPAARSALRLAGAVVSALAVASPAAAETLESALSRAYQANPALNAARANLRATD
EDVNRFQAGYRPNAALSADIGIQQFQGKIGGVGASGPINLTTRPGGAGLTINQNVFDGFQTDNRVRAAESTVLSTREGLR
QTEMNTLFNAAQAYMNVLSDTATLELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASI
GIFRQIVGVEPRQLAPGRPLDRYVPASLDQAILIGLKEHPQILASLHAVDVAELQVKVNEGALYPQAQITGAVQQRYDQQ
FPGDNGVTASIVGRVNIPLYQGGAEYAAIRQAKENVGRARLVADQDRDTIRASIVRTWGNLEASKAQVIASQAQVQANEV
ALNGVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVGRLTVRFTSLPVTPYSAREHLDQVRDLWF
GLRTPDGR

Sequences:

>Translated_488_residues
MHRSGHGSAAGRHIEKPQGLIDVKERNPAARSALRLAGAVVSALAVASPAAAETLESALSRAYQANPALNAARANLRATD
EDVNRFQAGYRPNAALSADIGIQQFQGKIGGVGASGPINLTTRPGGAGLTINQNVFDGFQTDNRVRAAESTVLSTREGLR
QTEMNTLFNAAQAYMNVLSDTATLELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASI
GIFRQIVGVEPRQLAPGRPLDRYVPASLDQAILIGLKEHPQILASLHAVDVAELQVKVNEGALYPQAQITGAVQQRYDQQ
FPGDNGVTASIVGRVNIPLYQGGAEYAAIRQAKENVGRARLVADQDRDTIRASIVRTWGNLEASKAQVIASQAQVQANEV
ALNGVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVGRLTVRFTSLPVTPYSAREHLDQVRDLWF
GLRTPDGR
>Mature_488_residues
MHRSGHGSAAGRHIEKPQGLIDVKERNPAARSALRLAGAVVSALAVASPAAAETLESALSRAYQANPALNAARANLRATD
EDVNRFQAGYRPNAALSADIGIQQFQGKIGGVGASGPINLTTRPGGAGLTINQNVFDGFQTDNRVRAAESTVLSTREGLR
QTEMNTLFNAAQAYMNVLSDTATLELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASI
GIFRQIVGVEPRQLAPGRPLDRYVPASLDQAILIGLKEHPQILASLHAVDVAELQVKVNEGALYPQAQITGAVQQRYDQQ
FPGDNGVTASIVGRVNIPLYQGGAEYAAIRQAKENVGRARLVADQDRDTIRASIVRTWGNLEASKAQVIASQAQVQANEV
ALNGVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVGRLTVRFTSLPVTPYSAREHLDQVRDLWF
GLRTPDGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=425, Percent_Identity=25.8823529411765, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52657; Mature: 52657

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSGHGSAAGRHIEKPQGLIDVKERNPAARSALRLAGAVVSALAVASPAAAETLESALS
CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RAYQANPALNAARANLRATDEDVNRFQAGYRPNAALSADIGIQQFQGKIGGVGASGPINL
HHHHCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCEECCCCHHHHCCCCCCCCCCCCEEE
TTRPGGAGLTINQNVFDGFQTDNRVRAAESTVLSTREGLRQTEMNTLFNAAQAYMNVLSD
EECCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TATLELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASI
CEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GIFRQIVGVEPRQLAPGRPLDRYVPASLDQAILIGLKEHPQILASLHAVDVAELQVKVNE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHHCEEEEEEEEECC
GALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIRQAKENVGRAR
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECEEEECCHHHHHHHHHHHHCCCEE
LVADQDRDTIRASIVRTWGNLEASKAQVIASQAQVQANEVALNGVREEARVGQRTTLDVL
EEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NAQQELLSARVALIRAQRDRVVNSYDVVQAVGRLTVRFTSLPVTPYSAREHLDQVRDLWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHH
GLRTPDGR
CCCCCCCC
>Mature Secondary Structure
MHRSGHGSAAGRHIEKPQGLIDVKERNPAARSALRLAGAVVSALAVASPAAAETLESALS
CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RAYQANPALNAARANLRATDEDVNRFQAGYRPNAALSADIGIQQFQGKIGGVGASGPINL
HHHHCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCEECCCCHHHHCCCCCCCCCCCCEEE
TTRPGGAGLTINQNVFDGFQTDNRVRAAESTVLSTREGLRQTEMNTLFNAAQAYMNVLSD
EECCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TATLELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASI
CEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GIFRQIVGVEPRQLAPGRPLDRYVPASLDQAILIGLKEHPQILASLHAVDVAELQVKVNE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHHCEEEEEEEEECC
GALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIRQAKENVGRAR
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECEEEECCHHHHHHHHHHHHCCCEE
LVADQDRDTIRASIVRTWGNLEASKAQVIASQAQVQANEVALNGVREEARVGQRTTLDVL
EEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NAQQELLSARVALIRAQRDRVVNSYDVVQAVGRLTVRFTSLPVTPYSAREHLDQVRDLWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHH
GLRTPDGR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]