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The map label for this gene is ydbC [H]

Identifier: 218533030

GI number: 218533030

Start: 5520470

End: 5521348

Strand: Reverse

Name: ydbC [H]

Synonym: Mchl_5154

Alternate gene names: 218533030

Gene position: 5521348-5520470 (Counterclockwise)

Preceding gene: 218533031

Following gene: 218533029

Centisome position: 95.56

GC content: 69.51

Gene sequence:

>879_bases
ATGGCGAGCGTCGAAGCATCGGGCACCTTCGCGATCGGCGGGGATCTCACCGTCCACCGGCTCGGGTTCGGCGCCATGCG
CATTACCGGGCCCGGCATCTGGGGCGATCCGCCCGACCGGGAGAAGGCGAAGGCGACCCTGCGGGCGGTGCCCGGCCTCG
GGATCGACTTGATCGACACCGCCGACAGCTACGGCCCCTTCGTCAGCGAGGATCTGATCCGCGAGACGCTTTACCCCTAC
GAGGGGCTCGTCATCGCCACCAAGGGCGGTCTGACGCGGCACGGGCCCGATATCTGGCAGCCCGTCGGCAATCCCGATTA
CCTGCGCCAATGCGTGCTGATGAGCCTACGACGGCTCGGTCTCGAGCGGATCGACCTGTGGCAGCTCCATCGGATCGGCC
CGGACTGTCCGCGCGAGGTGCAGTTCGAGGCGATCGCCCGGATGCGGGAGGAGGGGTTGATCCGCCATGTCGGCCTGTCC
GAGGTCTCGGTCGAGGACATCGAGGCCGCCCAGAAATTCTTCCCCGTGGCGAGCGTGCAGAACCGCTACAACCTCGTCGA
TCGCACCAGCGAGGCGGTGCTGGCGCATTGCGAGCGGCACGGCATCGGCTTCATCCCCTGGGCGCCCCTCGACAAGGGAT
CGCTGGCCGGCCCCGGTTCGGCCCTGGAGTCGATCGCCGGGCGTCTCGGCGCGAGCGGCAGCGCGGTCGCCCTCGCATGG
CTGTTGAAGCGCTCGCCGGTGATGCTGCCGATCCCCGGCACCGGCGATCCCGGCCACCTCGCCGAGAATGCCGCGGGCGC
AACCCTCACCTTGAGCGAAGAGGATTTCGCCGTCCTCGACCGGGCGGGACACGAAGCATGGCAGGGCGCCGGCGCGTGA

Upstream 100 bases:

>100_bases
GCTGATCCGCGAGTTCTGAAGCGCCCCGCGCCGGCAACGGACCCGGCAGCGGCCTTTCGGGTTCTCCCGTCAGCGGGAAG
GCTGCGAGAGGAACACAGGC

Downstream 100 bases:

>100_bases
CATCCGACAGGTGCTGGCGCGCACCTTGCACCGAGGTGGCCACGGAACCGAGCAGGGGCTGAGCCTTTCCGTTCCGGGCG
CCGACACGGTGCCGGACAGG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MASVEASGTFAIGGDLTVHRLGFGAMRITGPGIWGDPPDREKAKATLRAVPGLGIDLIDTADSYGPFVSEDLIRETLYPY
EGLVIATKGGLTRHGPDIWQPVGNPDYLRQCVLMSLRRLGLERIDLWQLHRIGPDCPREVQFEAIARMREEGLIRHVGLS
EVSVEDIEAAQKFFPVASVQNRYNLVDRTSEAVLAHCERHGIGFIPWAPLDKGSLAGPGSALESIAGRLGASGSAVALAW
LLKRSPVMLPIPGTGDPGHLAENAAGATLTLSEEDFAVLDRAGHEAWQGAGA

Sequences:

>Translated_292_residues
MASVEASGTFAIGGDLTVHRLGFGAMRITGPGIWGDPPDREKAKATLRAVPGLGIDLIDTADSYGPFVSEDLIRETLYPY
EGLVIATKGGLTRHGPDIWQPVGNPDYLRQCVLMSLRRLGLERIDLWQLHRIGPDCPREVQFEAIARMREEGLIRHVGLS
EVSVEDIEAAQKFFPVASVQNRYNLVDRTSEAVLAHCERHGIGFIPWAPLDKGSLAGPGSALESIAGRLGASGSAVALAW
LLKRSPVMLPIPGTGDPGHLAENAAGATLTLSEEDFAVLDRAGHEAWQGAGA
>Mature_291_residues
ASVEASGTFAIGGDLTVHRLGFGAMRITGPGIWGDPPDREKAKATLRAVPGLGIDLIDTADSYGPFVSEDLIRETLYPYE
GLVIATKGGLTRHGPDIWQPVGNPDYLRQCVLMSLRRLGLERIDLWQLHRIGPDCPREVQFEAIARMREEGLIRHVGLSE
VSVEDIEAAQKFFPVASVQNRYNLVDRTSEAVLAHCERHGIGFIPWAPLDKGSLAGPGSALESIAGRLGASGSAVALAWL
LKRSPVMLPIPGTGDPGHLAENAAGATLTLSEEDFAVLDRAGHEAWQGAGA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=282, Percent_Identity=41.8439716312057, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI87081735, Length=314, Percent_Identity=28.6624203821656, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1788070, Length=316, Percent_Identity=28.4810126582279, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1789375, Length=305, Percent_Identity=28.5245901639344, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788081, Length=265, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31256; Mature: 31125

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVEASGTFAIGGDLTVHRLGFGAMRITGPGIWGDPPDREKAKATLRAVPGLGIDLIDT
CCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
ADSYGPFVSEDLIRETLYPYEGLVIATKGGLTRHGPDIWQPVGNPDYLRQCVLMSLRRLG
CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
LERIDLWQLHRIGPDCPREVQFEAIARMREEGLIRHVGLSEVSVEDIEAAQKFFPVASVQ
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHCCHHHHH
NRYNLVDRTSEAVLAHCERHGIGFIPWAPLDKGSLAGPGSALESIAGRLGASGSAVALAW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
LLKRSPVMLPIPGTGDPGHLAENAAGATLTLSEEDFAVLDRAGHEAWQGAGA
HHHCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCHHHHCCCCC
>Mature Secondary Structure 
ASVEASGTFAIGGDLTVHRLGFGAMRITGPGIWGDPPDREKAKATLRAVPGLGIDLIDT
CCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
ADSYGPFVSEDLIRETLYPYEGLVIATKGGLTRHGPDIWQPVGNPDYLRQCVLMSLRRLG
CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
LERIDLWQLHRIGPDCPREVQFEAIARMREEGLIRHVGLSEVSVEDIEAAQKFFPVASVQ
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHCCHHHHH
NRYNLVDRTSEAVLAHCERHGIGFIPWAPLDKGSLAGPGSALESIAGRLGASGSAVALAW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
LLKRSPVMLPIPGTGDPGHLAENAAGATLTLSEEDFAVLDRAGHEAWQGAGA
HHHCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]