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The map label for this gene is ydcN [C]

Identifier: 218532605

GI number: 218532605

Start: 5005422

End: 5005682

Strand: Reverse

Name: ydcN [C]

Synonym: Mchl_4719

Alternate gene names: 218532605

Gene position: 5005682-5005422 (Counterclockwise)

Preceding gene: 218532611

Following gene: 218532599

Centisome position: 86.63

GC content: 72.8

Gene sequence:

>261_bases
ATGAAGGGTCGGGCATTGGTCGCGTGGAACCTGCGCCGGGTGCGCGTGGCGCAGGGCTTGAGCCAGGAGCGGCTGGCGGC
GGACGCGGGCGTGGACCGGGCGTATCTCGGTGGCCTGGAACGGCAGGCCGAGAACCCGACGGTCGATTTGCTCGACAAGG
TCGCCGAGGCGCTGGCCGTCCCGCTGGGGGAGCTGTTCGTGGCGCCGGAGGCGGGAGCGCAAGCGCCGGAGCCGCTACGT
GGCGGTCGGCGCAAGCTCTGA

Upstream 100 bases:

>100_bases
CTGTGCCCCGTACGGTCATCCTGCCGCGGGCTGAGCTTAGCCTTACGGTGTGGCTATAGCCAGTGGTTAGATAGCCCGTG
CTGGTCGCTGATCCTCGTCC

Downstream 100 bases:

>100_bases
GGCGACTTCGGTGGCCTGGAACGGCAGGCCGAGAACCCGACGGTCGATTATGCTCGACAAGGTCGCCGAGGCGCTGGCCG
TCCCGCTGGGGAGCTGTTCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcription Regulator Protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKGRALVAWNLRRVRVAQGLSQERLAADAGVDRAYLGGLERQAENPTVDLLDKVAEALAVPLGELFVAPEAGAQAPEPLR
GGRRKL

Sequences:

>Translated_86_residues
MKGRALVAWNLRRVRVAQGLSQERLAADAGVDRAYLGGLERQAENPTVDLLDKVAEALAVPLGELFVAPEAGAQAPEPLR
GGRRKL
>Mature_86_residues
MKGRALVAWNLRRVRVAQGLSQERLAADAGVDRAYLGGLERQAENPTVDLLDKVAEALAVPLGELFVAPEAGAQAPEPLR
GGRRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9215; Mature: 9215

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRALVAWNLRRVRVAQGLSQERLAADAGVDRAYLGGLERQAENPTVDLLDKVAEALAV
CCCCEEEECCHHHHHHHCCCCHHHHHHHCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHC
PLGELFVAPEAGAQAPEPLRGGRRKL
CHHHEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKGRALVAWNLRRVRVAQGLSQERLAADAGVDRAYLGGLERQAENPTVDLLDKVAEALAV
CCCCEEEECCHHHHHHHCCCCHHHHHHHCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHC
PLGELFVAPEAGAQAPEPLRGGRRKL
CHHHEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA