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The map label for this gene is ypfJ [H]

Identifier: 218532501

GI number: 218532501

Start: 4890737

End: 4891642

Strand: Reverse

Name: ypfJ [H]

Synonym: Mchl_4615

Alternate gene names: 218532501

Gene position: 4891642-4890737 (Counterclockwise)

Preceding gene: 218532502

Following gene: 218532500

Centisome position: 84.66

GC content: 67.22

Gene sequence:

>906_bases
ATGCGCTGGGACGATTTTCGCGCCTCTGAGAACGTCGAAGACCGGCGCGGCGAGGGCGGCGGCGGGGGCGGCTTCCCCGG
CGGCGGCATGGGCGGCCTCGGCATCGGCACGATCGTCGTCGTGCTGCTGATCTCCTGGGTCACCGGCATCAACCCGGCGA
TCCTGCTCGGCGGTGCGCAGCAGATGACCGGCGGCGGGCAGCAGCGCGAGCAGCGGGTCGATCCCGAGACGCAGGCCCGG
CGCGGCGAGGCGCCGACCGATCGCGCCGGCCAGTTCGCCTCGAAGATCCTCGGCAACACCGAGGACGTGTGGAACGAGAT
TCTGCCGAACCAGACCGGGCGGCCATACAAGCCGACGACGATGGTGCTCTACCAGGGCGGCACCCGTTCGGGATGCGGCA
TGGCCCAGGCCGCGATGGGGCCGTTCTACTGCCCACTCGACAAGAAGGTCTATATCGACCTTGGGTTCTTCAAGGAGATG
CAGACCAAGTTCGGCGTGAAGGGCGATTTCGCCTACGCCTACGTCATCGCCCACGAGGTCGGTCACCACGTGCAGGACGT
GCTCGGCATCCTCGGCAAGGTACAGAGCCGCCAGCAGAACGCGAGCAGCAAGACGGAAGCGAACCAGCTCTCCGTGCGCG
TCGAGCTGATGGCCGACTGCCTCGCCGGCGTCTGGGCCAAGAACTCGAACGACCGCTGGAACGCCCTCGACCAGAACGAC
ATCAAGGAGGCGCTCAACGCCGCCAGCGCCATCGGCGACGACAAGCTGCAGGAAAAGTCGCAAGGCTACGCCGTGCCGGA
TTCCTTCACCCACGGCTCCTCCGAGCAGCGGATGCGCTGGTTCATGACCGGCTACAAGAGCGGCCAGACCAAGTCCTGCG
ACACCTTCCGCGCCAGCCGCGGCTGA

Upstream 100 bases:

>100_bases
GGGCGGCTCAAGCGGAACCGTATCCTCCGCCTCGCCATTCTAGAAATCAGGTCCGGAATCCCGATGAGGCCGGGCGAGAC
GCGGGGCGGCGGGAGACTTT

Downstream 100 bases:

>100_bases
TTTTCTTGGAATTTGGGAAGGCGGATATGGCCGAGACCGCGCGCGAGCTGATGCTCGCCGGAAAGCCCTATCGCGGCGAC
GATCCGGAACTGATCGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRWDDFRASENVEDRRGEGGGGGGFPGGGMGGLGIGTIVVVLLISWVTGINPAILLGGAQQMTGGGQQREQRVDPETQAR
RGEAPTDRAGQFASKILGNTEDVWNEILPNQTGRPYKPTTMVLYQGGTRSGCGMAQAAMGPFYCPLDKKVYIDLGFFKEM
QTKFGVKGDFAYAYVIAHEVGHHVQDVLGILGKVQSRQQNASSKTEANQLSVRVELMADCLAGVWAKNSNDRWNALDQND
IKEALNAASAIGDDKLQEKSQGYAVPDSFTHGSSEQRMRWFMTGYKSGQTKSCDTFRASRG

Sequences:

>Translated_301_residues
MRWDDFRASENVEDRRGEGGGGGGFPGGGMGGLGIGTIVVVLLISWVTGINPAILLGGAQQMTGGGQQREQRVDPETQAR
RGEAPTDRAGQFASKILGNTEDVWNEILPNQTGRPYKPTTMVLYQGGTRSGCGMAQAAMGPFYCPLDKKVYIDLGFFKEM
QTKFGVKGDFAYAYVIAHEVGHHVQDVLGILGKVQSRQQNASSKTEANQLSVRVELMADCLAGVWAKNSNDRWNALDQND
IKEALNAASAIGDDKLQEKSQGYAVPDSFTHGSSEQRMRWFMTGYKSGQTKSCDTFRASRG
>Mature_301_residues
MRWDDFRASENVEDRRGEGGGGGGFPGGGMGGLGIGTIVVVLLISWVTGINPAILLGGAQQMTGGGQQREQRVDPETQAR
RGEAPTDRAGQFASKILGNTEDVWNEILPNQTGRPYKPTTMVLYQGGTRSGCGMAQAAMGPFYCPLDKKVYIDLGFFKEM
QTKFGVKGDFAYAYVIAHEVGHHVQDVLGILGKVQSRQQNASSKTEANQLSVRVELMADCLAGVWAKNSNDRWNALDQND
IKEALNAASAIGDDKLQEKSQGYAVPDSFTHGSSEQRMRWFMTGYKSGQTKSCDTFRASRG

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=302, Percent_Identity=47.0198675496689, Blast_Score=255, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 32656; Mature: 32656

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDDFRASENVEDRRGEGGGGGGFPGGGMGGLGIGTIVVVLLISWVTGINPAILLGGAQ
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHH
QMTGGGQQREQRVDPETQARRGEAPTDRAGQFASKILGNTEDVWNEILPNQTGRPYKPTT
HHCCCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEE
MVLYQGGTRSGCGMAQAAMGPFYCPLDKKVYIDLGFFKEMQTKFGVKGDFAYAYVIAHEV
EEEECCCCCCCCCHHHHHCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHH
GHHVQDVLGILGKVQSRQQNASSKTEANQLSVRVELMADCLAGVWAKNSNDRWNALDQND
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
IKEALNAASAIGDDKLQEKSQGYAVPDSFTHGSSEQRMRWFMTGYKSGQTKSCDTFRASR
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCC
G
C
>Mature Secondary Structure
MRWDDFRASENVEDRRGEGGGGGGFPGGGMGGLGIGTIVVVLLISWVTGINPAILLGGAQ
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHH
QMTGGGQQREQRVDPETQARRGEAPTDRAGQFASKILGNTEDVWNEILPNQTGRPYKPTT
HHCCCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEE
MVLYQGGTRSGCGMAQAAMGPFYCPLDKKVYIDLGFFKEMQTKFGVKGDFAYAYVIAHEV
EEEECCCCCCCCCHHHHHCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHH
GHHVQDVLGILGKVQSRQQNASSKTEANQLSVRVELMADCLAGVWAKNSNDRWNALDQND
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
IKEALNAASAIGDDKLQEKSQGYAVPDSFTHGSSEQRMRWFMTGYKSGQTKSCDTFRASR
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]