| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yhhT [H]
Identifier: 218532471
GI number: 218532471
Start: 4857808
End: 4859766
Strand: Reverse
Name: yhhT [H]
Synonym: Mchl_4584
Alternate gene names: 218532471
Gene position: 4859766-4857808 (Counterclockwise)
Preceding gene: 218532472
Following gene: 218532469
Centisome position: 84.11
GC content: 72.79
Gene sequence:
>1959_bases ATGACCACCGATCCGGTCACCACGCGGCTCCTGCGGCAGGCGCTGCCGGTGGTGACGACGCTCGCCTCGATGCTGCTGGT CGTGACGCTCGCGGGCGCGCTGTATTTCGGCCGCGACATCCTCGTGCCGGTGGCGCTCGCCATCCTGCTGAGCTTCGTCC TCGTGCCCGCCGTGCGGGCCCTGCGGCGCGTCCGGGTGCCGCGGGTGGCGGCGGTGCTGCTGGTGGTGGTGCTCGCGTTC GGCCTGCTCGGCGCGATCGGCAGCCTGATCGCCCGCGAGGCGGCGCAGCTCGCGACCGATCTGCCGCGCTACTCGCTGAC CCTGCGCGACAAGATCACGGCCCTGCGCGCCGCCACCGCCGAGCGCGGAAGCCTGTCGGACACCTTCTCCGGCTTCTTCG ACATGGCCGAGGAGATCGGCAAGGAGTTGCAGCCGCCCGCCGCCAAGACCGAGTCCGAGACGAACGCGCCGCTCGGCACG GCGGAGCGGCCGATGCAGGTCGAGATCCACGCTCCCCGCACCGGGCTGCTGACGACGCTCGGCAGCGTGGCGGGCGGGGT GCTGCACCCGCTGGCGACGCTCGGCTTGATCCTGCTGTTCACGATCTTCATCCTGCTCCAGCGCGAGGATCTGCGAAACC GCGCGATCCGGCTCGCGGGATCGAGCGATCTGCGCCGCACCACCGCGGCGATCGACGACGCCACGAGCCGGCTCAGCCGG TTCTTCGTGGCGCAGCTCATCCTCAACGTCGCCTTCGGCCTCGTGATCGGCGTGGGCCTGTGGTTCATCGGCGTGCCGAG CCCGATCCTGTTCGGCGTTATCGCCGGCATCTCGCGCTTCGTGCCCTATGTCGGCGCGGTGCTCTCGGCGGCGCTGCCGC TCGCCATCGCCGTGGCCGTCGATCCCGGCTGGTCGATGGCGATCCAAGTCGCGATCCTGTTCGTCGTGATCGAGCCGATC GCCGGCCACGTGGTCGAACCGCTGCTCTACGGGCACTCGACCGGCATCTCGCCGATTGCGGTGATCCTCGCGGCGACGAT CTGGACCTTCCTGTGGGGGCCGATCGGCCTCCTGCTCGCCACCCCGCTGACCGTCTGCCTCGTAGTGCTCGGCCGCCATG TCGAGCGGCTGTGGTTCCTCGACGTGATCCTCGGCGACCGCCCGGCGCTCGGCCCCCAGGAGATCTTCTACCAGCGCATG CTGGCGGGCGATCCGGCCGAGGCCGTCGATCAGGGGCGGCTGTTCCTGAAGGAGCGGGCGCTCGTGACCTACTACGACGA GGTCGTGCTTCCGGGCCTGCGCATGGCCCAGGAAGATGCGGCGCGCGGCATGCTCGACCGGGAGCGGCAGGGCGAGGTCG GCGCCGGCTTCCGCACGGTGGTCGAGGCGCTGGGGCTGGCGCGCAAGCGCGGCATGCCGCGGCGCTCGCGCAAGCCCATC GGGGCCGAGGCCGAGGCCGCCTTCGCCGCGGTGGGGCCGGACCGGCACACCGCCGGCATCGTGCTCGGCCCGGACGACTT GGCTTCGGCCTGGCGCGGCGAGGCGCCGGTCCTGTGCGTGCCGAGCGGGGGCGCCTTCGACGAGGCCGCGACGCTGATGC TCGCTCAGACGCTCTCCCGCCACGGGCTCGGAGCGCGGGTGGCGCCGGGCGACGCGTTGCGGAACGGTCTGCCCGAGGGC GAGCGCCCGGCGATGATCTGCTTCTCCTATCTCGACCCGATCAGCCTGTCGCAGATCCGCCTGACCATCCGTCGCGCCCG CAAGGCCGCGCCGGGAGTGACGATCCTCGTCGGCTTCTGGCGCGAGCGCGACCCGGCCTCCCTCGGCCGCCTGCGCCGGG CGATCTCCGCCGACCTGCTCGTGACCTCGCTGAGCGACGCCCTCGACGCCGCACTGGCGCGGGCGCGGGCCGGGACAGCC GCTCCGGCCTCGCCCCGGCTTCGGCAGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CCTCAGGATGAGGGGGGATGAAGGGGAACACCTGTTGGCTGCCGGGGACAGGCCGCTTTCTTCTCTCGACGCCTGTCGAG TCCGCCATCATGAGGCTTCT
Downstream 100 bases:
>100_bases GGCTAAGCCGGGCGAACCCCGTCAGGACAGGGCCACCAGGGCGACGCCCGCGATCATCAGCGCCCCACCGAGAAGGCGCG TGACGCTCGCGGGATGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MTTDPVTTRLLRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVAAVLLVVVLAF GLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSLSDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGT AERPMQVEIHAPRTGLLTTLGSVAGGVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSR FFVAQLILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWSMAIQVAILFVVIEPI AGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTVCLVVLGRHVERLWFLDVILGDRPALGPQEIFYQRM LAGDPAEAVDQGRLFLKERALVTYYDEVVLPGLRMAQEDAARGMLDRERQGEVGAGFRTVVEALGLARKRGMPRRSRKPI GAEAEAAFAAVGPDRHTAGIVLGPDDLASAWRGEAPVLCVPSGGAFDEAATLMLAQTLSRHGLGARVAPGDALRNGLPEG ERPAMICFSYLDPISLSQIRLTIRRARKAAPGVTILVGFWRERDPASLGRLRRAISADLLVTSLSDALDAALARARAGTA APASPRLRQAAE
Sequences:
>Translated_652_residues MTTDPVTTRLLRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVAAVLLVVVLAF GLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSLSDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGT AERPMQVEIHAPRTGLLTTLGSVAGGVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSR FFVAQLILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWSMAIQVAILFVVIEPI AGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTVCLVVLGRHVERLWFLDVILGDRPALGPQEIFYQRM LAGDPAEAVDQGRLFLKERALVTYYDEVVLPGLRMAQEDAARGMLDRERQGEVGAGFRTVVEALGLARKRGMPRRSRKPI GAEAEAAFAAVGPDRHTAGIVLGPDDLASAWRGEAPVLCVPSGGAFDEAATLMLAQTLSRHGLGARVAPGDALRNGLPEG ERPAMICFSYLDPISLSQIRLTIRRARKAAPGVTILVGFWRERDPASLGRLRRAISADLLVTSLSDALDAALARARAGTA APASPRLRQAAE >Mature_651_residues TTDPVTTRLLRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVAAVLLVVVLAFG LLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSLSDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTA ERPMQVEIHAPRTGLLTTLGSVAGGVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRF FVAQLILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWSMAIQVAILFVVIEPIA GHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTVCLVVLGRHVERLWFLDVILGDRPALGPQEIFYQRML AGDPAEAVDQGRLFLKERALVTYYDEVVLPGLRMAQEDAARGMLDRERQGEVGAGFRTVVEALGLARKRGMPRRSRKPIG AEAEAAFAAVGPDRHTAGIVLGPDDLASAWRGEAPVLCVPSGGAFDEAATLMLAQTLSRHGLGARVAPGDALRNGLPEGE RPAMICFSYLDPISLSQIRLTIRRARKAAPGVTILVGFWRERDPASLGRLRRAISADLLVTSLSDALDAALARARAGTAA PASPRLRQAAE
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI87082271, Length=364, Percent_Identity=28.021978021978, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1787885, Length=138, Percent_Identity=31.8840579710145, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 69416; Mature: 69285
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDPVTTRLLRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRVRVPRVAAVLLVVVLAFGLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH ERGSLSDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRTGLLTTL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH GSVAGGVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH FFVAQLILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE DPGWSMAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TPLTVCLVVLGRHVERLWFLDVILGDRPALGPQEIFYQRMLAGDPAEAVDQGRLFLKERA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVTYYDEVVLPGLRMAQEDAARGMLDRERQGEVGAGFRTVVEALGLARKRGMPRRSRKPI HHHHHHHHHHCCHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC GAEAEAAFAAVGPDRHTAGIVLGPDDLASAWRGEAPVLCVPSGGAFDEAATLMLAQTLSR CCCHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHH HGLGARVAPGDALRNGLPEGERPAMICFSYLDPISLSQIRLTIRRARKAAPGVTILVGFW CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECC RERDPASLGRLRRAISADLLVTSLSDALDAALARARAGTAAPASPRLRQAAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC >Mature Secondary Structure TTDPVTTRLLRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRVRVPRVAAVLLVVVLAFGLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH ERGSLSDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRTGLLTTL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH GSVAGGVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH FFVAQLILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE DPGWSMAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TPLTVCLVVLGRHVERLWFLDVILGDRPALGPQEIFYQRMLAGDPAEAVDQGRLFLKERA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVTYYDEVVLPGLRMAQEDAARGMLDRERQGEVGAGFRTVVEALGLARKRGMPRRSRKPI HHHHHHHHHHCCHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC GAEAEAAFAAVGPDRHTAGIVLGPDDLASAWRGEAPVLCVPSGGAFDEAATLMLAQTLSR CCCHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHH HGLGARVAPGDALRNGLPEGERPAMICFSYLDPISLSQIRLTIRRARKAAPGVTILVGFW CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECC RERDPASLGRLRRAISADLLVTSLSDALDAALARARAGTAAPASPRLRQAAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]