| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218532325
Identifier: 218532325
GI number: 218532325
Start: 4695320
End: 4695793
Strand: Reverse
Name: 218532325
Synonym: Mchl_4437
Alternate gene names: NA
Gene position: 4695793-4695320 (Counterclockwise)
Preceding gene: 218532326
Following gene: 218532324
Centisome position: 81.27
GC content: 70.25
Gene sequence:
>474_bases ATGAACTCGGTCAAGGAACGTCTGGAAGCGCTCGGCCTGAAGCTGCCGAAGGCGGCGGCCCCGGTCGCGAACTACGTGCC CTATATCCGCACCGGCAACCTCGTCGTCATCTCCGGCCAGATCTGCTTCGGGCCGGACGGCACCCTCGACCCGGCGCACA AGGGCAAGCTCGGCGCCGAGGTCTCGGCCGAGCAGGGCATCGCGGCGGCCCGGCTCTGCGCGCTCAACGTGCTGGCCCAG GTCCAGGCGGCGGTGGGCGACCTCGACCACGGCGTCGTGCAATGCGTGCGGCTCGGCGGCTTCATCAACGCGGTGCCGAG CTTTGCCGGTCTCGCCCCGATCATGAATGGCGCCTCCGACCTGATGGTCGCGATCCTCGGCGACCGTGGTCGCCATGCCC GCTCGACGGTGGGGGTCGCCGAACTGCCCCTCGACGCGGCGGTCGAGGTCGAGGCGATGTTCGAGGTCGCGTGA
Upstream 100 bases:
>100_bases GCGACGGAGACCGCCGGTTGAGAGGGCGCTTCGCCCTTCCCCCTTGCGAGTCGCCCCTCCCCCATGCTCAGACCCCGGCA GCATCATGCGGGAGACGGCG
Downstream 100 bases:
>100_bases GCGCGACCCTGGACCGGGCGCCGGACTGGCTCATTGCCCGTCCGATCGCCCATCGCGGCCTGCACGACCGCGCCGCCGGC ATCCCGGAGAACACCCTGGC
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Endoribonuclease L-Psp; Transcriptional Regulator; YjgF Family Translation Initiation Inhibitor; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Translation Initiation Inhibitor Protein; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNSVKERLEALGLKLPKAAAPVANYVPYIRTGNLVVISGQICFGPDGTLDPAHKGKLGAEVSAEQGIAAARLCALNVLAQ VQAAVGDLDHGVVQCVRLGGFINAVPSFAGLAPIMNGASDLMVAILGDRGRHARSTVGVAELPLDAAVEVEAMFEVA
Sequences:
>Translated_157_residues MNSVKERLEALGLKLPKAAAPVANYVPYIRTGNLVVISGQICFGPDGTLDPAHKGKLGAEVSAEQGIAAARLCALNVLAQ VQAAVGDLDHGVVQCVRLGGFINAVPSFAGLAPIMNGASDLMVAILGDRGRHARSTVGVAELPLDAAVEVEAMFEVA >Mature_157_residues MNSVKERLEALGLKLPKAAAPVANYVPYIRTGNLVVISGQICFGPDGTLDPAHKGKLGAEVSAEQGIAAARLCALNVLAQ VQAAVGDLDHGVVQCVRLGGFINAVPSFAGLAPIMNGASDLMVAILGDRGRHARSTVGVAELPLDAAVEVEAMFEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16097; Mature: 16097
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVKERLEALGLKLPKAAAPVANYVPYIRTGNLVVISGQICFGPDGTLDPAHKGKLGAE CCHHHHHHHHHCCCCCCHHCCHHHCCCEEECCCEEEEECEEEECCCCCCCCCCCCCCCCC VSAEQGIAAARLCALNVLAQVQAAVGDLDHGVVQCVRLGGFINAVPSFAGLAPIMNGASD CCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LMVAILGDRGRHARSTVGVAELPLDAAVEVEAMFEVA HEEEEECCCCCCHHHHCCHHHCCCCCHHHHHEEEECC >Mature Secondary Structure MNSVKERLEALGLKLPKAAAPVANYVPYIRTGNLVVISGQICFGPDGTLDPAHKGKLGAE CCHHHHHHHHHCCCCCCHHCCHHHCCCEEECCCEEEEECEEEECCCCCCCCCCCCCCCCC VSAEQGIAAARLCALNVLAQVQAAVGDLDHGVVQCVRLGGFINAVPSFAGLAPIMNGASD CCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LMVAILGDRGRHARSTVGVAELPLDAAVEVEAMFEVA HEEEEECCCCCCHHHHCCHHHCCCCCHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA