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The map label for this gene is phyR [H]

Identifier: 218532294

GI number: 218532294

Start: 4661742

End: 4662206

Strand: Reverse

Name: phyR [H]

Synonym: Mchl_4406

Alternate gene names: 218532294

Gene position: 4662206-4661742 (Counterclockwise)

Preceding gene: 218532295

Following gene: 218532292

Centisome position: 80.69

GC content: 72.26

Gene sequence:

>465_bases
ATGCCCGAGGTGAGGGAGGGGCCCCTGCGCATTCTCGTTGTCGAGGACGAGGTGCTGATCGCCCTCGAACTGGAATGCCT
GCTGGAAGACCTCGGTCATGTCAGCGTCGGCGTCGCGGGCTCCTCGGCGGACGCCATCGCGCTCGGCCGCACCGCCCTGC
CGGACGTGGCGCTGGTGGACATCCACCTCATCGACGGGCCGACCGGAGTGGAGGTGGCGCGCCAGTTGAGCCGCGACCCG
CGGGTCACCGTGGTGTTCATGACCGCCAACGCCAAGCGCATCCCGCCGGATTTCGCGGGCGCGCTCGGAGTGATCGCCAA
GCCCTATTCCGAGCGCGCCGTGGCGGGCGCCCTCGACTACGTCGCCCAGCGCCGTGCCGGCCACCCGCCCTCCGCCGAGA
CCCTCGACGGCTTCCACCTCGCTCCGGCCGCGGGCGGCGGGGATTGGACCGGCGGAGCGCCGTAA

Upstream 100 bases:

>100_bases
ACCGGAAACCGGTCCCGCGGCGGGCCGGGCCCGCTCCCTTCGCCGCCAATCCGGCGGATCGATTCGGGGCGGGGGGACAA
ACGACGCCGGGAGAACCGCG

Downstream 100 bases:

>100_bases
GAGACGGGCGCCGCCCTCACCCCTTCGGCACGTTCCGCTCCAGCTCGTCGAGCCACGCCCGGGCGCTGGCATCCGACGGC
GCGCGCCAGTCGCCGCGGGG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPEVREGPLRILVVEDEVLIALELECLLEDLGHVSVGVAGSSADAIALGRTALPDVALVDIHLIDGPTGVEVARQLSRDP
RVTVVFMTANAKRIPPDFAGALGVIAKPYSERAVAGALDYVAQRRAGHPPSAETLDGFHLAPAAGGGDWTGGAP

Sequences:

>Translated_154_residues
MPEVREGPLRILVVEDEVLIALELECLLEDLGHVSVGVAGSSADAIALGRTALPDVALVDIHLIDGPTGVEVARQLSRDP
RVTVVFMTANAKRIPPDFAGALGVIAKPYSERAVAGALDYVAQRRAGHPPSAETLDGFHLAPAAGGGDWTGGAP
>Mature_153_residues
PEVREGPLRILVVEDEVLIALELECLLEDLGHVSVGVAGSSADAIALGRTALPDVALVDIHLIDGPTGVEVARQLSRDPR
VTVVFMTANAKRIPPDFAGALGVIAKPYSERAVAGALDYVAQRRAGHPPSAETLDGFHLAPAAGGGDWTGGAP

Specific function: Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However it is not known whether this regulation is direct or indirect. Also induces several de

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR014605
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 15932; Mature: 15801

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVREGPLRILVVEDEVLIALELECLLEDLGHVSVGVAGSSADAIALGRTALPDVALVD
CCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCEEEEE
IHLIDGPTGVEVARQLSRDPRVTVVFMTANAKRIPPDFAGALGVIAKPYSERAVAGALDY
EEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
VAQRRAGHPPSAETLDGFHLAPAAGGGDWTGGAP
HHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PEVREGPLRILVVEDEVLIALELECLLEDLGHVSVGVAGSSADAIALGRTALPDVALVD
CCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCEEEEE
IHLIDGPTGVEVARQLSRDPRVTVVFMTANAKRIPPDFAGALGVIAKPYSERAVAGALDY
EEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
VAQRRAGHPPSAETLDGFHLAPAAGGGDWTGGAP
HHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA