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The map label for this gene is ycgF [C]

Identifier: 218532289

GI number: 218532289

Start: 4652420

End: 4652866

Strand: Reverse

Name: ycgF [C]

Synonym: Mchl_4401

Alternate gene names: 218532289

Gene position: 4652866-4652420 (Counterclockwise)

Preceding gene: 218532290

Following gene: 218532288

Centisome position: 80.53

GC content: 70.47

Gene sequence:

>447_bases
ATGAACCCGAAAGACCTGCGCCGCCTCGTCTACTACAGCCGCAACCGGGTCGCCGGTGCCCCCGCGGCAATGGACGAGAC
GATCCGCGGCATCCTGGCCGCGAGCCGAACCAACAACGCCCGCATCGACGTCACCGGCGCGCTGATGTTCAACGCCGGCT
GCTTCGCGCAGGTGCTGGAGGGGCCGGAAGACGCGGTCGAGGCCACCTTCGAGCGCATCCAGCAGGACGAGCGCCACGGC
GAGGTCTCGCTGCTCGCCTTCGAGGCGGTGGAGACGCGCCTCTTCACCGATTGGTCGATGGCCTATGTCGGCGCCTCGCC
GGACGACGCGGCCCGCTACGGCGACGTGGCCGGCGAGAGCGGCTTCGACCTCTCGCGGATGACCGGAGACCGGCTCTGCG
CCATGCTACACGGGCTCGCCCTGGAGGAGGAGGCGGCCGAGGCGTAG

Upstream 100 bases:

>100_bases
ACCGGACGCCCGATGCCGGCCGCCCAGGCCGCCGCCCTGTTGTCCGCCTCGCCCGCTCCCTCGCCCTCGACCTTGCCCGC
CTGATCCAGGAGCCCGCCGA

Downstream 100 bases:

>100_bases
TTTCCGAGCCGCACGGGTTGAGCTAGAGGCGCCAGCCTGATCACATCAGGTCGGCGCCTCCAGTTCCTGTTTCAACGCGC
ATTCTTTCGACGAACCGGTT

Product: BLUF domain protein

Products: NA

Alternate protein names: BLUF Domain Protein; Photopigment And Puc Activator; Sensors Of Blue-Light Using FAD Family; Blue-Light Sensor BluF Domain; Blue-Light Receptor BLUF Domain-Containing Protein; Photopigment And Puc Expression Activator; Bluf Domain Protein

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNPKDLRRLVYYSRNRVAGAPAAMDETIRGILAASRTNNARIDVTGALMFNAGCFAQVLEGPEDAVEATFERIQQDERHG
EVSLLAFEAVETRLFTDWSMAYVGASPDDAARYGDVAGESGFDLSRMTGDRLCAMLHGLALEEEAAEA

Sequences:

>Translated_148_residues
MNPKDLRRLVYYSRNRVAGAPAAMDETIRGILAASRTNNARIDVTGALMFNAGCFAQVLEGPEDAVEATFERIQQDERHG
EVSLLAFEAVETRLFTDWSMAYVGASPDDAARYGDVAGESGFDLSRMTGDRLCAMLHGLALEEEAAEA
>Mature_148_residues
MNPKDLRRLVYYSRNRVAGAPAAMDETIRGILAASRTNNARIDVTGALMFNAGCFAQVLEGPEDAVEATFERIQQDERHG
EVSLLAFEAVETRLFTDWSMAYVGASPDDAARYGDVAGESGFDLSRMTGDRLCAMLHGLALEEEAAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16107; Mature: 16107

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKDLRRLVYYSRNRVAGAPAAMDETIRGILAASRTNNARIDVTGALMFNAGCFAQVLE
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHC
GPEDAVEATFERIQQDERHGEVSLLAFEAVETRLFTDWSMAYVGASPDDAARYGDVAGES
CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCC
GFDLSRMTGDRLCAMLHGLALEEEAAEA
CCCHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MNPKDLRRLVYYSRNRVAGAPAAMDETIRGILAASRTNNARIDVTGALMFNAGCFAQVLE
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHC
GPEDAVEATFERIQQDERHGEVSLLAFEAVETRLFTDWSMAYVGASPDDAARYGDVAGES
CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCC
GFDLSRMTGDRLCAMLHGLALEEEAAEA
CCCHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA