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The map label for this gene is glxA [H]

Identifier: 218531942

GI number: 218531942

Start: 4241468

End: 4242499

Strand: Reverse

Name: glxA [H]

Synonym: Mchl_4030

Alternate gene names: 218531942

Gene position: 4242499-4241468 (Counterclockwise)

Preceding gene: 218531949

Following gene: 218531937

Centisome position: 73.43

GC content: 69.09

Gene sequence:

>1032_bases
ATGACGATCGCGGCCGGGGCCACATGCCCGGCAGGTGTTGCTGCGGCGAGCGAGGCCGTGACCGGGAGAGCCATCTCCGT
CGGCTTCATGCTGGTCGATCGCTTCTCGATGATCGCCTTCTCCTCGGCGATCGAGCCCCTGCGGCTCGCCAACCGCGCGG
TCGGCCGCGACCTCTACCGCTTCTCGCTGTGGTCGGAGGACGGCACCAAGTGCACCGCCTCGAACGGGATCGAGGTCAAG
GTCGCGGGCCGCTTCTGCGATGCGCAGGACTTCGACATGCTGGTCGTGTGCGGCGGCATCGACATCCAGCATCCGGATCA
CCGCGCCCTCCATTCGGCCCTGCGCCGATGCAGCGCCCGCGGGGCGGCGATCGGCGCGGTCTGCACGGGCACCTACGTCC
TGGCCAAGGCCGGCCTCCTCGACGGCTACCGGGCGACGATCCACTGGGAGAACCTGCCGGGCCTCGTCTCGGAGCATGAC
GGGCTGGAGATCGGCTCGGACCTGTTCGAGATCGACCGCAACCGCTTTACCTGCGCGGGCGGCACCGCGGCGGCCGACAT
GATGCTGTCGCTGATCGTGCGCGACCACGGGCCGAGCGTGGCCTCGGAGGTCGCCGACCAGCTCATCCACCACCGCATCC
GCGAATCCGGCGAGCGCCAGCGGATGGACCTGCGGATGCGCCTCGGGGTCTCGCACCCGAAACTGCTGCGGGTGGTGGGG
CTGATGGAAACCTCGCTCGCCGAGCCGCTCGGCAGCCAAGAACTCGCCGACGCGGTACAGCTCTCGACCCGCCAGCTCGA
ACGGCTGTTCCTGAAGTATCTCGGCCGCTCACCGGCCAAGCACTATCTGCGCATCCGCCTGGAACACGCCCGCAACCTGA
TCCGCCAGACCGCGATGCCGCTGCTCTCGGTGGCGTTCGAATGCGGCTTCACCTCGGCCTCGCACTTCTCGAAGGCCTAT
CTCGACTGCTTCGGCCAGCCGCCGAGCGCGGAGCGGAAGCTGGTGCAGACGCAAGGCAGCGTGCGCGCCTGA

Upstream 100 bases:

>100_bases
GCGACCCCGAATCGCTCCCCCGCCGGCACAAGGATCGCCGCGGCACGCGATTTGCCCACCAAGCCGCGGCATAGGCCGAC
AAACGGTGGTCGGGATGGAA

Downstream 100 bases:

>100_bases
GCCGTCGCGGCCAATCCCCCTCACCTGATCAAAGCACAGCGGGGCGCCGGGTCATCCGGCGCCCCGCTGTGCCTTCCTTG
CTGCGTGCCGATGCAGGCTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTIAAGATCPAGVAAASEAVTGRAISVGFMLVDRFSMIAFSSAIEPLRLANRAVGRDLYRFSLWSEDGTKCTASNGIEVK
VAGRFCDAQDFDMLVVCGGIDIQHPDHRALHSALRRCSARGAAIGAVCTGTYVLAKAGLLDGYRATIHWENLPGLVSEHD
GLEIGSDLFEIDRNRFTCAGGTAAADMMLSLIVRDHGPSVASEVADQLIHHRIRESGERQRMDLRMRLGVSHPKLLRVVG
LMETSLAEPLGSQELADAVQLSTRQLERLFLKYLGRSPAKHYLRIRLEHARNLIRQTAMPLLSVAFECGFTSASHFSKAY
LDCFGQPPSAERKLVQTQGSVRA

Sequences:

>Translated_343_residues
MTIAAGATCPAGVAAASEAVTGRAISVGFMLVDRFSMIAFSSAIEPLRLANRAVGRDLYRFSLWSEDGTKCTASNGIEVK
VAGRFCDAQDFDMLVVCGGIDIQHPDHRALHSALRRCSARGAAIGAVCTGTYVLAKAGLLDGYRATIHWENLPGLVSEHD
GLEIGSDLFEIDRNRFTCAGGTAAADMMLSLIVRDHGPSVASEVADQLIHHRIRESGERQRMDLRMRLGVSHPKLLRVVG
LMETSLAEPLGSQELADAVQLSTRQLERLFLKYLGRSPAKHYLRIRLEHARNLIRQTAMPLLSVAFECGFTSASHFSKAY
LDCFGQPPSAERKLVQTQGSVRA
>Mature_342_residues
TIAAGATCPAGVAAASEAVTGRAISVGFMLVDRFSMIAFSSAIEPLRLANRAVGRDLYRFSLWSEDGTKCTASNGIEVKV
AGRFCDAQDFDMLVVCGGIDIQHPDHRALHSALRRCSARGAAIGAVCTGTYVLAKAGLLDGYRATIHWENLPGLVSEHDG
LEIGSDLFEIDRNRFTCAGGTAAADMMLSLIVRDHGPSVASEVADQLIHHRIRESGERQRMDLRMRLGVSHPKLLRVVGL
METSLAEPLGSQELADAVQLSTRQLERLFLKYLGRSPAKHYLRIRLEHARNLIRQTAMPLLSVAFECGFTSASHFSKAYL
DCFGQPPSAERKLVQTQGSVRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37279; Mature: 37148

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAAGATCPAGVAAASEAVTGRAISVGFMLVDRFSMIAFSSAIEPLRLANRAVGRDLYR
CEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLWSEDGTKCTASNGIEVKVAGRFCDAQDFDMLVVCGGIDIQHPDHRALHSALRRCSAR
EEEECCCCCEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
GAAIGAVCTGTYVLAKAGLLDGYRATIHWENLPGLVSEHDGLEIGSDLFEIDRNRFTCAG
CCEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCHHHHHCCCEEEECC
GTAAADMMLSLIVRDHGPSVASEVADQLIHHRIRESGERQRMDLRMRLGVSHPKLLRVVG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
LMETSLAEPLGSQELADAVQLSTRQLERLFLKYLGRSPAKHYLRIRLEHARNLIRQTAMP
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LLSVAFECGFTSASHFSKAYLDCFGQPPSAERKLVQTQGSVRA
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TIAAGATCPAGVAAASEAVTGRAISVGFMLVDRFSMIAFSSAIEPLRLANRAVGRDLYR
EECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLWSEDGTKCTASNGIEVKVAGRFCDAQDFDMLVVCGGIDIQHPDHRALHSALRRCSAR
EEEECCCCCEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
GAAIGAVCTGTYVLAKAGLLDGYRATIHWENLPGLVSEHDGLEIGSDLFEIDRNRFTCAG
CCEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCHHHHHCCCEEEECC
GTAAADMMLSLIVRDHGPSVASEVADQLIHHRIRESGERQRMDLRMRLGVSHPKLLRVVG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
LMETSLAEPLGSQELADAVQLSTRQLERLFLKYLGRSPAKHYLRIRLEHARNLIRQTAMP
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LLSVAFECGFTSASHFSKAYLDCFGQPPSAERKLVQTQGSVRA
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]