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The map label for this gene is 218531781

Identifier: 218531781

GI number: 218531781

Start: 4063665

End: 4063955

Strand: Reverse

Name: 218531781

Synonym: Mchl_3857

Alternate gene names: NA

Gene position: 4063955-4063665 (Counterclockwise)

Preceding gene: 218531782

Following gene: 218531779

Centisome position: 70.34

GC content: 72.51

Gene sequence:

>291_bases
ATGCTCCTGCAACGCCTCGCGGTGCGGGCCGCTCTCGCTTGCCTCGTGCTCAGCGTGACTCCGGCCCGCGCCGAAATCGT
ATCGTGGTACGGGCCCGGTTTCCATGGGCAGCTCACGGCCAACGGCGAGCGGCTCGACCAAAATGCGCTCACCGCCGCCC
ACCGGAGCCTGCGCTGCAGCACCCGCGTGCGGGTCACCAACGCGGCGACCGGCCGCTCCACCGACCTCGCCCGCGGCGCC
GCCCTGGCCATCGGCTGCGGCACCTGTCGCGTCGCCCTTCAGCCCCTTTGA

Upstream 100 bases:

>100_bases
TGGCTCGAAGCTTCTAATTTCTCCGGTTCGCTGCCGCCAATCTGCCCCCGCTCGCCGCGCCATCCGGCCCGAGCTTCTTC
TCTCGACAATCGGACCCACC

Downstream 100 bases:

>100_bases
ACCGCAGCGCAGGCGCGCCGATGTCTCGCCCCGCCCACAACGCGGCTCATCACGCCGTCTATCAGCGGCGAGCCATGAGC
CTTGATCGCAGTCGGGCCCA

Product: Rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLLQRLAVRAALACLVLSVTPARAEIVSWYGPGFHGQLTANGERLDQNALTAAHRSLRCSTRVRVTNAATGRSTDLARGA
ALAIGCGTCRVALQPL

Sequences:

>Translated_96_residues
MLLQRLAVRAALACLVLSVTPARAEIVSWYGPGFHGQLTANGERLDQNALTAAHRSLRCSTRVRVTNAATGRSTDLARGA
ALAIGCGTCRVALQPL
>Mature_96_residues
MLLQRLAVRAALACLVLSVTPARAEIVSWYGPGFHGQLTANGERLDQNALTAAHRSLRCSTRVRVTNAATGRSTDLARGA
ALAIGCGTCRVALQPL

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 10099; Mature: 10099

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQRLAVRAALACLVLSVTPARAEIVSWYGPGFHGQLTANGERLDQNALTAAHRSLRCS
CHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHCCCC
TRVRVTNAATGRSTDLARGAALAIGCGTCRVALQPL
CEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECC
>Mature Secondary Structure
MLLQRLAVRAALACLVLSVTPARAEIVSWYGPGFHGQLTANGERLDQNALTAAHRSLRCS
CHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHCCCC
TRVRVTNAATGRSTDLARGAALAIGCGTCRVALQPL
CEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]