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The map label for this gene is glcD [H]

Identifier: 218531713

GI number: 218531713

Start: 3995225

End: 3996676

Strand: Reverse

Name: glcD [H]

Synonym: Mchl_3782

Alternate gene names: 218531713

Gene position: 3996676-3995225 (Counterclockwise)

Preceding gene: 218531717

Following gene: 218531712

Centisome position: 69.17

GC content: 71.69

Gene sequence:

>1452_bases
ATGACCGCTCCCCTCTCCCACGATCGCCTGCTGGCCACGCTCTCCGAGCGGCTCGGCAGTCGACACGTGCGCACCGATCC
GGCCGATCTCGCGCCGCATCTCGTCGAGTCGCGCGGGCTCTACCGCGGCCATGCGCTGGCCGTCGTGGCGCCGGGCACGA
CCGAGGAGGTCGCCTTCACCGTGCGAACCTGCGCCGAGGCACGGGTGCCGGTGGTGGCGCAGGGTGGCAATACCGGCCTC
GTCGGCGGCGGCGTGCCCTTCGGCGGGATCGTGCTGTCGCTCAACCGCCTCGACCGGCTGCGCGCGATCGATCCCCTCGG
CGCCAGCATGATGGTGGAAGCCGGCATGATCCTCGCCGACGTGCAGGCCGCGGCCGACGCGGCGGGGATGCTGTTCCCGC
TCTCCTGGGCGGCGGAGGGCACGGCACGGATCGGCGGCGGGCTCGCCACCAATGCCGGGGGCCTGGCGGTGCTGGCCTAC
GGCAATGCCCGCGACCTCGTGCTCGGCCTCGAAGTCGTGCTCGCCGACGGACGGATCTGGAACGGGCTCAAGGCGCTGCG
CAAGAACAATGCGGGCTACGACCTCAAACACCTGTTCGTCGGCTCGGAAGGCACGCTCGGCATCATCACCGCCGCGACCC
TCAAGCTGTACCCCAAGCCCCTCTCCACCTGCGTCGGCTTCGTCGGCCTCGCCTCGGCGCAGGCGGCGCTCGCCCTGTTC
GCCCGGCTCCGGGCCGGTGCCGACCGCGGGCTGACGGCCTTCGAGTACATGCCCCGCTTCGGCCTGGAGATGGTGCTGAG
ACACGGCATCGACGTGCGTCCGCCGCTCTCCGGCTCCCATGCCGCCTACGCCCTGGTGGAGCTGTCCTCGCCCCGGCCCG
GCTCCGACACCCGCGCCGAGATGGAAGCCTTGCTCGCCGAGGCGATGGAGGCGGGAGAGGTGGAGGATGCGGTGATCGGC
GGCAGCGCGGCGCAGGACGCCGCCCTGTGGCGCCTGCGCGAGTTGCTGCCCGAGGTGCAGAAGGCGGAGGGCGGCTCGAT
CAAGCACGACGTCTCGCTGCCGCTCTCGCGCCTCGCCGACTTCCTGGAAGAGGCGAGTGCGGCCTGCGAGGCGGCCATGC
CGGGCCTGCGCCCCTGCCCGTTCGGGCATTTTGGCGACGGCAACATCCACTTCAATCTGACCCAGCCGGTCGGCATGGAG
AAGGCGGCGTTCCTGAGCCAGTGGGGCCGCTTCAACGCCATCGTTCACGGCATCGTCGAGCGCATGGACGGCTCGATCGC
CGCCGAGCACGGCATCGGCTTGATCAAGCGCGACGAACTCGCCCGCACCGCCGACCCCGTCGGCCTCGACCTGATGCGGC
GGTTGAAGGCCGCCCTCGACCCGCACGATGGGCTCAATCCGGGCAAGGTGGTGGCCCTCTCGGACGACCCGCCGCCGGCT
CTCCCGGTCTGA

Upstream 100 bases:

>100_bases
ATACCCGTTCCGCCATCCTCGGCCCTCGGTGCAAATGCCGTTCCCCCGGCCTATCTGAGGAAGGCGACGCTTCGTTCGTC
CCCGCCTCCGCCCTCCATCG

Downstream 100 bases:

>100_bases
AAGCGCGGGTGACGGGGCGCACGCGGGAACGCGCGCCGGCCTCTGCGGGTTGTTGTGCGGCGCACAAGATGGCTGCATGA
TCCGGGTCACAGGGCCGGGA

Product: FAD linked oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTAPLSHDRLLATLSERLGSRHVRTDPADLAPHLVESRGLYRGHALAVVAPGTTEEVAFTVRTCAEARVPVVAQGGNTGL
VGGGVPFGGIVLSLNRLDRLRAIDPLGASMMVEAGMILADVQAAADAAGMLFPLSWAAEGTARIGGGLATNAGGLAVLAY
GNARDLVLGLEVVLADGRIWNGLKALRKNNAGYDLKHLFVGSEGTLGIITAATLKLYPKPLSTCVGFVGLASAQAALALF
ARLRAGADRGLTAFEYMPRFGLEMVLRHGIDVRPPLSGSHAAYALVELSSPRPGSDTRAEMEALLAEAMEAGEVEDAVIG
GSAAQDAALWRLRELLPEVQKAEGGSIKHDVSLPLSRLADFLEEASAACEAAMPGLRPCPFGHFGDGNIHFNLTQPVGME
KAAFLSQWGRFNAIVHGIVERMDGSIAAEHGIGLIKRDELARTADPVGLDLMRRLKAALDPHDGLNPGKVVALSDDPPPA
LPV

Sequences:

>Translated_483_residues
MTAPLSHDRLLATLSERLGSRHVRTDPADLAPHLVESRGLYRGHALAVVAPGTTEEVAFTVRTCAEARVPVVAQGGNTGL
VGGGVPFGGIVLSLNRLDRLRAIDPLGASMMVEAGMILADVQAAADAAGMLFPLSWAAEGTARIGGGLATNAGGLAVLAY
GNARDLVLGLEVVLADGRIWNGLKALRKNNAGYDLKHLFVGSEGTLGIITAATLKLYPKPLSTCVGFVGLASAQAALALF
ARLRAGADRGLTAFEYMPRFGLEMVLRHGIDVRPPLSGSHAAYALVELSSPRPGSDTRAEMEALLAEAMEAGEVEDAVIG
GSAAQDAALWRLRELLPEVQKAEGGSIKHDVSLPLSRLADFLEEASAACEAAMPGLRPCPFGHFGDGNIHFNLTQPVGME
KAAFLSQWGRFNAIVHGIVERMDGSIAAEHGIGLIKRDELARTADPVGLDLMRRLKAALDPHDGLNPGKVVALSDDPPPA
LPV
>Mature_482_residues
TAPLSHDRLLATLSERLGSRHVRTDPADLAPHLVESRGLYRGHALAVVAPGTTEEVAFTVRTCAEARVPVVAQGGNTGLV
GGGVPFGGIVLSLNRLDRLRAIDPLGASMMVEAGMILADVQAAADAAGMLFPLSWAAEGTARIGGGLATNAGGLAVLAYG
NARDLVLGLEVVLADGRIWNGLKALRKNNAGYDLKHLFVGSEGTLGIITAATLKLYPKPLSTCVGFVGLASAQAALALFA
RLRAGADRGLTAFEYMPRFGLEMVLRHGIDVRPPLSGSHAAYALVELSSPRPGSDTRAEMEALLAEAMEAGEVEDAVIGG
SAAQDAALWRLRELLPEVQKAEGGSIKHDVSLPLSRLADFLEEASAACEAAMPGLRPCPFGHFGDGNIHFNLTQPVGMEK
AAFLSQWGRFNAIVHGIVERMDGSIAAEHGIGLIKRDELARTADPVGLDLMRRLKAALDPHDGLNPGKVVALSDDPPPAL
PV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=458, Percent_Identity=37.9912663755458, Blast_Score=270, Evalue=3e-72,
Organism=Homo sapiens, GI37595756, Length=440, Percent_Identity=32.7272727272727, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI37595754, Length=463, Percent_Identity=31.317494600432, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI4501993, Length=201, Percent_Identity=25.8706467661692, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1789351, Length=477, Percent_Identity=29.1404612159329, Blast_Score=135, Evalue=8e-33,
Organism=Escherichia coli, GI48994907, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787977, Length=229, Percent_Identity=28.3842794759825, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994914, Length=154, Percent_Identity=31.8181818181818, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17534361, Length=469, Percent_Identity=32.6226012793177, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI71992373, Length=446, Percent_Identity=30.9417040358744, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI71992381, Length=445, Percent_Identity=30.1123595505618, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71992392, Length=406, Percent_Identity=31.0344827586207, Blast_Score=128, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6320023, Length=458, Percent_Identity=36.0262008733624, Blast_Score=298, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6320764, Length=456, Percent_Identity=33.3333333333333, Blast_Score=266, Evalue=5e-72,
Organism=Saccharomyces cerevisiae, GI6320027, Length=496, Percent_Identity=27.0161290322581, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI18921117, Length=466, Percent_Identity=34.7639484978541, Blast_Score=276, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24639277, Length=466, Percent_Identity=34.7639484978541, Blast_Score=276, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24639275, Length=466, Percent_Identity=34.7639484978541, Blast_Score=276, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24653753, Length=178, Percent_Identity=29.7752808988764, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50532; Mature: 50401

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLSHDRLLATLSERLGSRHVRTDPADLAPHLVESRGLYRGHALAVVAPGTTEEVAFT
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH
VRTCAEARVPVVAQGGNTGLVGGGVPFGGIVLSLNRLDRLRAIDPLGASMMVEAGMILAD
HHHHHHCCCCEEEECCCCCEECCCCCCCHHEEEHHHHHHHHHCCCCCHHHHHHCCHHHHH
VQAAADAAGMLFPLSWAAEGTARIGGGLATNAGGLAVLAYGNARDLVLGLEVVLADGRIW
HHHHHHHCCEEEEECCCCCCCHHHCCCEEECCCCEEEEEECCCCCCEEEEEEEEECCCHH
NGLKALRKNNAGYDLKHLFVGSEGTLGIITAATLKLYPKPLSTCVGFVGLASAQAALALF
HHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEHEECCCHHHHHHHHHHHHHHHHHHHHH
ARLRAGADRGLTAFEYMPRFGLEMVLRHGIDVRPPLSGSHAAYALVELSSPRPGSDTRAE
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH
MEALLAEAMEAGEVEDAVIGGSAAQDAALWRLRELLPEVQKAEGGSIKHDVSLPLSRLAD
HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHH
FLEEASAACEAAMPGLRPCPFGHFGDGNIHFNLTQPVGMEKAAFLSQWGRFNAIVHGIVE
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RMDGSIAAEHGIGLIKRDELARTADPVGLDLMRRLKAALDPHDGLNPGKVVALSDDPPPA
HHCCCEEHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
LPV
CCC
>Mature Secondary Structure 
TAPLSHDRLLATLSERLGSRHVRTDPADLAPHLVESRGLYRGHALAVVAPGTTEEVAFT
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH
VRTCAEARVPVVAQGGNTGLVGGGVPFGGIVLSLNRLDRLRAIDPLGASMMVEAGMILAD
HHHHHHCCCCEEEECCCCCEECCCCCCCHHEEEHHHHHHHHHCCCCCHHHHHHCCHHHHH
VQAAADAAGMLFPLSWAAEGTARIGGGLATNAGGLAVLAYGNARDLVLGLEVVLADGRIW
HHHHHHHCCEEEEECCCCCCCHHHCCCEEECCCCEEEEEECCCCCCEEEEEEEEECCCHH
NGLKALRKNNAGYDLKHLFVGSEGTLGIITAATLKLYPKPLSTCVGFVGLASAQAALALF
HHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEHEECCCHHHHHHHHHHHHHHHHHHHHH
ARLRAGADRGLTAFEYMPRFGLEMVLRHGIDVRPPLSGSHAAYALVELSSPRPGSDTRAE
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH
MEALLAEAMEAGEVEDAVIGGSAAQDAALWRLRELLPEVQKAEGGSIKHDVSLPLSRLAD
HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHH
FLEEASAACEAAMPGLRPCPFGHFGDGNIHFNLTQPVGMEKAAFLSQWGRFNAIVHGIVE
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RMDGSIAAEHGIGLIKRDELARTADPVGLDLMRRLKAALDPHDGLNPGKVVALSDDPPPA
HHCCCEEHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
LPV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]