| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218531711
Identifier: 218531711
GI number: 218531711
Start: 3993217
End: 3994476
Strand: Reverse
Name: 218531711
Synonym: Mchl_3780
Alternate gene names: NA
Gene position: 3994476-3993217 (Counterclockwise)
Preceding gene: 218531712
Following gene: 218531707
Centisome position: 69.13
GC content: 71.51
Gene sequence:
>1260_bases ATGAGCCAGACGCCGGGCACGGCCGCCCTCCCCTTCACCGAGCGCCTCGACCGGCTGGCGGAAGTCGCCGTGCGGGTCGG CCTCGGGCTGAAAGCGGGCCAGGAACTGGTGATGACGGCGCCGCTCGAAGCGGTGCCGCTGGCCCGCGCCATCACCGAGC AGGCCTACAAGGCCGGCGCTTCGCTGGTCACCACCTTCTACGCGGACGACGCCGCAACGCTCGCCCGCTTCACCCACGCG CCCGACGAGGCGTTCGACCGGGCCGCCGGCTGGCTCTATGCCGGCATGGCGGACGCCTACCGGAGCGGAGCGGCCCGGCT TGCCATCTCGGGCGACGACCCGTCCCTGCTGGCGGGTCAGGATCCGTCCAAGGTCGCCCGCGCCAACCGTTCGCGCTCAC AGGCCTACGTGCCGGCGCTGGAACTGATCGCCGGCTTCTCCACCAACTGGACCATCGTCTCGGCCGCGACCAAGCCCTGG GCGCGCACGGTCTTCCCCGACCTGCCCGAGGACGAGGCGGTCGCGCGCCTGTGGGACGCGGTCTTTGCCGCCTCGCGCAT CGACGGACCCGACCCCGTCGCGGCCTGGGGCGCGCATAACCGCGATCTCGCCCGCCGCACCGAGCGGCTCAACGGCGCCC GTTTCTCCGCCTTGCGCTTCCGCGGCCCCGGCACGGACCTGACCGTGGGGCTCGCCGACGATCACGAATGGTGCGGCGGC GCCACGACGGCCAAGAACGGCATCGTCTGCAACGCCAACATCCCGACCGAGGAGGTGTTCACCACGCCCCACCGGGCGCG GGTGGAGGGTTATGTCGCCAGCACCAAGCCGCTCTCCTACCAGGGCACCCTGATCGACGACATCCGCGTGCGCTTCTCCG AGGGCCGCATCGTCGAGGCGAACGCGCGCACCGGCAGCGACGTGCTCGCCAAGGTGCTCGACACCGACGAGGGCGCCGCC CGCCTGGGCGAGGTGGCCCTGGTGCCCGCCTCCTCGGCGATCTCGGCCTCGGGCCTGTTGTTCTACAACACGCTCTACGA CGAGAACGCCGCGAGCCACATCGCCCTGGGGCAGGCCTACTCGAAATGCTTCCGCAACGGCGGCGACGGTCTGAGCGAGT CGGATCTCGCCGAGCGCGGTGCCAACCGCAGCCTGATCCATATCGACTGGATGATCGGCTCGGCCGAGATCGACGTGGAC GGGATCACCGCCTCGGGCGAGGCTTTGCCGGTGATGCGCCGCGGCGAGTGGGCCGACTGA
Upstream 100 bases:
>100_bases TCACGTGGTCGCGCGCGGCCTGAGCCGCGGATCGGTCTGACGGGATCGATTCCCGGCCGGGAAGACGGCGCGCGGCGTGA CAGCCTGGAGAACCCCTTCC
Downstream 100 bases:
>100_bases TTTCTTGTGTATCCGCCGTCCGCCGGGATCAGGTGCTCTGCGCTTCCCCGGCGGGCTGCACCGGAAGCGTTCCCTTCGGC AGCATCTTGGGCCGCCAGCG
Product: peptidase M29 aminopeptidase II
Products: NA
Alternate protein names: AP-T; Heat-stable aminopeptidase [H]
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSQTPGTAALPFTERLDRLAEVAVRVGLGLKAGQELVMTAPLEAVPLARAITEQAYKAGASLVTTFYADDAATLARFTHA PDEAFDRAAGWLYAGMADAYRSGAARLAISGDDPSLLAGQDPSKVARANRSRSQAYVPALELIAGFSTNWTIVSAATKPW ARTVFPDLPEDEAVARLWDAVFAASRIDGPDPVAAWGAHNRDLARRTERLNGARFSALRFRGPGTDLTVGLADDHEWCGG ATTAKNGIVCNANIPTEEVFTTPHRARVEGYVASTKPLSYQGTLIDDIRVRFSEGRIVEANARTGSDVLAKVLDTDEGAA RLGEVALVPASSAISASGLLFYNTLYDENAASHIALGQAYSKCFRNGGDGLSESDLAERGANRSLIHIDWMIGSAEIDVD GITASGEALPVMRRGEWAD
Sequences:
>Translated_419_residues MSQTPGTAALPFTERLDRLAEVAVRVGLGLKAGQELVMTAPLEAVPLARAITEQAYKAGASLVTTFYADDAATLARFTHA PDEAFDRAAGWLYAGMADAYRSGAARLAISGDDPSLLAGQDPSKVARANRSRSQAYVPALELIAGFSTNWTIVSAATKPW ARTVFPDLPEDEAVARLWDAVFAASRIDGPDPVAAWGAHNRDLARRTERLNGARFSALRFRGPGTDLTVGLADDHEWCGG ATTAKNGIVCNANIPTEEVFTTPHRARVEGYVASTKPLSYQGTLIDDIRVRFSEGRIVEANARTGSDVLAKVLDTDEGAA RLGEVALVPASSAISASGLLFYNTLYDENAASHIALGQAYSKCFRNGGDGLSESDLAERGANRSLIHIDWMIGSAEIDVD GITASGEALPVMRRGEWAD >Mature_418_residues SQTPGTAALPFTERLDRLAEVAVRVGLGLKAGQELVMTAPLEAVPLARAITEQAYKAGASLVTTFYADDAATLARFTHAP DEAFDRAAGWLYAGMADAYRSGAARLAISGDDPSLLAGQDPSKVARANRSRSQAYVPALELIAGFSTNWTIVSAATKPWA RTVFPDLPEDEAVARLWDAVFAASRIDGPDPVAAWGAHNRDLARRTERLNGARFSALRFRGPGTDLTVGLADDHEWCGGA TTAKNGIVCNANIPTEEVFTTPHRARVEGYVASTKPLSYQGTLIDDIRVRFSEGRIVEANARTGSDVLAKVLDTDEGAAR LGEVALVPASSAISASGLLFYNTLYDENAASHIALGQAYSKCFRNGGDGLSESDLAERGANRSLIHIDWMIGSAEIDVDG ITASGEALPVMRRGEWAD
Specific function: Metal-dependent exopeptidase [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 44553; Mature: 44422
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPGTAALPFTERLDRLAEVAVRVGLGLKAGQELVMTAPLEAVPLARAITEQAYKAGA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC SLVTTFYADDAATLARFTHAPDEAFDRAAGWLYAGMADAYRSGAARLAISGDDPSLLAGQ CEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCC DPSKVARANRSRSQAYVPALELIAGFSTNWTIVSAATKPWARTVFPDLPEDEAVARLWDA CHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHH VFAASRIDGPDPVAAWGAHNRDLARRTERLNGARFSALRFRGPGTDLTVGLADDHEWCGG HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCC ATTAKNGIVCNANIPTEEVFTTPHRARVEGYVASTKPLSYQGTLIDDIRVRFSEGRIVEA CCCCCCCEEEECCCCHHHHCCCCCHHHEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEE NARTGSDVLAKVLDTDEGAARLGEVALVPASSAISASGLLFYNTLYDENAASHIALGQAY CCCCCHHHHHHHHCCCCCHHHHCCEEEECCCCCCCCCCEEEEEEHHCCCCHHHHHHHHHH SKCFRNGGDGLSESDLAERGANRSLIHIDWMIGSAEIDVDGITASGEALPVMRRGEWAD HHHHHCCCCCCCHHHHHHCCCCCCEEEEEEEECCEEEEECCEECCCCCCEEECCCCCCC >Mature Secondary Structure SQTPGTAALPFTERLDRLAEVAVRVGLGLKAGQELVMTAPLEAVPLARAITEQAYKAGA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC SLVTTFYADDAATLARFTHAPDEAFDRAAGWLYAGMADAYRSGAARLAISGDDPSLLAGQ CEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCC DPSKVARANRSRSQAYVPALELIAGFSTNWTIVSAATKPWARTVFPDLPEDEAVARLWDA CHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHH VFAASRIDGPDPVAAWGAHNRDLARRTERLNGARFSALRFRGPGTDLTVGLADDHEWCGG HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCC ATTAKNGIVCNANIPTEEVFTTPHRARVEGYVASTKPLSYQGTLIDDIRVRFSEGRIVEA CCCCCCCEEEECCCCHHHHCCCCCHHHEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEE NARTGSDVLAKVLDTDEGAARLGEVALVPASSAISASGLLFYNTLYDENAASHIALGQAY CCCCCHHHHHHHHCCCCCHHHHCCEEEECCCCCCCCCCEEEEEEHHCCCCHHHHHHHHHH SKCFRNGGDGLSESDLAERGANRSLIHIDWMIGSAEIDVDGITASGEALPVMRRGEWAD HHHHHCCCCCCCHHHHHHCCCCCCEEEEEEEECCEEEEECCEECCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117 [H]