Click here to switch to the map view.

The map label for this gene is groS [H]

Identifier: 218531591

GI number: 218531591

Start: 3854242

End: 3854532

Strand: Reverse

Name: groS [H]

Synonym: Mchl_3660

Alternate gene names: 218531591

Gene position: 3854532-3854242 (Counterclockwise)

Preceding gene: 218531592

Following gene: 218531590

Centisome position: 66.71

GC content: 66.67

Gene sequence:

>291_bases
ATGGCGTTTCGACCCCTGCACGACCGCGTGCTGCTGCGCCGCATTGAGAGCGACGAGCGGACGAAGGGTGGCATCATCAT
CCCCGACACCGCGAAGGAGAAGCCGCAGGAGGGCGAGGTCGTGGCCGTCGGACCCGGTGCCCGCGACGACCAGGGCCGCG
TCACCGCGCTGGACGTCAAGACCGGCGACCGCGTGCTGTTCGGCAAGTGGTCCGGCACCGAAATCAAGGTCGACGGCCAG
GACCTCTTGATCCTCAAGGAATCCGACATTCTCGGCGTGATCACCGCCTGA

Upstream 100 bases:

>100_bases
CCGTTGACTTAAAGAACGTAGGCGGACACCCTGTCGGTATTGGACAACGGGCTCCGGCCGGCGCGCCGGCCGCAGCCCAA
ACGACGGGAGTTCCTGAAGG

Downstream 100 bases:

>100_bases
GCAAGCTCTGACGTCATCGACAACAGGAGATCGGAATGGCTGCCAAGGACGTGAAATTCTCGGGTGATGCGCGCGAGCGC
CTGTTACGCGGCGTCGATAT

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAFRPLHDRVLLRRIESDERTKGGIIIPDTAKEKPQEGEVVAVGPGARDDQGRVTALDVKTGDRVLFGKWSGTEIKVDGQ
DLLILKESDILGVITA

Sequences:

>Translated_96_residues
MAFRPLHDRVLLRRIESDERTKGGIIIPDTAKEKPQEGEVVAVGPGARDDQGRVTALDVKTGDRVLFGKWSGTEIKVDGQ
DLLILKESDILGVITA
>Mature_95_residues
AFRPLHDRVLLRRIESDERTKGGIIIPDTAKEKPQEGEVVAVGPGARDDQGRVTALDVKTGDRVLFGKWSGTEIKVDGQD
LLILKESDILGVITA

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Homo sapiens, GI4504523, Length=90, Percent_Identity=40, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790585, Length=97, Percent_Identity=44.3298969072165, Blast_Score=83, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17555568, Length=92, Percent_Identity=44.5652173913043, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324594, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21356029, Length=90, Percent_Identity=44.4444444444444, Blast_Score=76, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21358317, Length=90, Percent_Identity=43.3333333333333, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10479; Mature: 10348

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRPLHDRVLLRRIESDERTKGGIIIPDTAKEKPQEGEVVAVGPGARDDQGRVTALDVK
CCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
TGDRVLFGKWSGTEIKVDGQDLLILKESDILGVITA
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEEEEC
>Mature Secondary Structure 
AFRPLHDRVLLRRIESDERTKGGIIIPDTAKEKPQEGEVVAVGPGARDDQGRVTALDVK
CCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
TGDRVLFGKWSGTEIKVDGQDLLILKESDILGVITA
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA