| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
Click here to switch to the map view.
The map label for this gene is ydcZ [C]
Identifier: 218531495
GI number: 218531495
Start: 3750125
End: 3750571
Strand: Reverse
Name: ydcZ [C]
Synonym: Mchl_3563
Alternate gene names: 218531495
Gene position: 3750571-3750125 (Counterclockwise)
Preceding gene: 218531496
Following gene: 218531491
Centisome position: 64.91
GC content: 72.48
Gene sequence:
>447_bases ATGCTTCGTCTCCTGCTCCCCTCCCTCTTCGCCATCGCGGCGGGCGTCAGCATCGTCGTCCAGCAGGTGCTGAATGCCCG CCTGCGCGCGGATCTCGGCTCCGCGGCCTGGGCCGGTTTCGCGAGCTACGCCGCCGGCCTCGCCTGCATGGCGCTGCTCG CCCTGGCTCTGCGCGATCCCCTGCCCGCGACGAGCGTGGCGGCGCGGGTGCCGTGGTGGGCCTGGGGCGGCGGCCTGTTC GGCGCGCTCTTCATCGGGCTGGCCATCGTTCTCGTGCCGCAACTCGGCGCGGCGGCCTTCATCGCGCTCCTCGTCGCCGG GCAGATGCTCGCCTCGGTCACGTTCGACCATTTCGGCTGGATGGGCCTCGCCCAGCGCCCCCTCGACGGTCCGCGCCTGA TCGGCGTCGCCCTGCTCGTTGGCGGCGTGATTCTGATCCGGCGCTAA
Upstream 100 bases:
>100_bases GCATTCTGCTCGGCCCCCGGACGATCCCACGAGCCGGGTCGCTTGAGCGACCCGGACGTCAGACCCGGCCGATCGAAGGA TTGCCGGAGGCTGAGGGCCG
Downstream 100 bases:
>100_bases AAGCGGCTTCAGGCGCCAACGGCGTGCAGCGCGATCTCGCGCCGATGCGCCCGGTCGCGGTGCTCGATCAGGTAGATCCC CTGCCACGTGCCCAGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDPLPATSVAARVPWWAWGGGLF GALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGWMGLAQRPLDGPRLIGVALLVGGVILIRR
Sequences:
>Translated_148_residues MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDPLPATSVAARVPWWAWGGGLF GALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGWMGLAQRPLDGPRLIGVALLVGGVILIRR >Mature_148_residues MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDPLPATSVAARVPWWAWGGGLF GALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGWMGLAQRPLDGPRLIGVALLVGGVILIRR
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15327; Mature: 15327
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LPATSVAARVPWWAWGGGLFGALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGW CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGLAQRPLDGPRLIGVALLVGGVILIRR HHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LPATSVAARVPWWAWGGGLFGALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGW CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGLAQRPLDGPRLIGVALLVGGVILIRR HHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA