Definition Methylobacterium chloromethanicum CM4, complete genome.
Accession NC_011757
Length 5,777,908

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The map label for this gene is ydcZ [C]

Identifier: 218531495

GI number: 218531495

Start: 3750125

End: 3750571

Strand: Reverse

Name: ydcZ [C]

Synonym: Mchl_3563

Alternate gene names: 218531495

Gene position: 3750571-3750125 (Counterclockwise)

Preceding gene: 218531496

Following gene: 218531491

Centisome position: 64.91

GC content: 72.48

Gene sequence:

>447_bases
ATGCTTCGTCTCCTGCTCCCCTCCCTCTTCGCCATCGCGGCGGGCGTCAGCATCGTCGTCCAGCAGGTGCTGAATGCCCG
CCTGCGCGCGGATCTCGGCTCCGCGGCCTGGGCCGGTTTCGCGAGCTACGCCGCCGGCCTCGCCTGCATGGCGCTGCTCG
CCCTGGCTCTGCGCGATCCCCTGCCCGCGACGAGCGTGGCGGCGCGGGTGCCGTGGTGGGCCTGGGGCGGCGGCCTGTTC
GGCGCGCTCTTCATCGGGCTGGCCATCGTTCTCGTGCCGCAACTCGGCGCGGCGGCCTTCATCGCGCTCCTCGTCGCCGG
GCAGATGCTCGCCTCGGTCACGTTCGACCATTTCGGCTGGATGGGCCTCGCCCAGCGCCCCCTCGACGGTCCGCGCCTGA
TCGGCGTCGCCCTGCTCGTTGGCGGCGTGATTCTGATCCGGCGCTAA

Upstream 100 bases:

>100_bases
GCATTCTGCTCGGCCCCCGGACGATCCCACGAGCCGGGTCGCTTGAGCGACCCGGACGTCAGACCCGGCCGATCGAAGGA
TTGCCGGAGGCTGAGGGCCG

Downstream 100 bases:

>100_bases
AAGCGGCTTCAGGCGCCAACGGCGTGCAGCGCGATCTCGCGCCGATGCGCCCGGTCGCGGTGCTCGATCAGGTAGATCCC
CTGCCACGTGCCCAGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDPLPATSVAARVPWWAWGGGLF
GALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGWMGLAQRPLDGPRLIGVALLVGGVILIRR

Sequences:

>Translated_148_residues
MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDPLPATSVAARVPWWAWGGGLF
GALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGWMGLAQRPLDGPRLIGVALLVGGVILIRR
>Mature_148_residues
MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDPLPATSVAARVPWWAWGGGLF
GALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGWMGLAQRPLDGPRLIGVALLVGGVILIRR

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15327; Mature: 15327

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPATSVAARVPWWAWGGGLFGALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGW
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLAQRPLDGPRLIGVALLVGGVILIRR
HHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRLLLPSLFAIAAGVSIVVQQVLNARLRADLGSAAWAGFASYAAGLACMALLALALRDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPATSVAARVPWWAWGGGLFGALFIGLAIVLVPQLGAAAFIALLVAGQMLASVTFDHFGW
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLAQRPLDGPRLIGVALLVGGVILIRR
HHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA