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The map label for this gene is ydaM [H]

Identifier: 218531481

GI number: 218531481

Start: 3736213

End: 3738057

Strand: Reverse

Name: ydaM [H]

Synonym: Mchl_3549

Alternate gene names: 218531481

Gene position: 3738057-3736213 (Counterclockwise)

Preceding gene: 218531484

Following gene: 218531477

Centisome position: 64.7

GC content: 72.25

Gene sequence:

>1845_bases
GTGTCCCTCGAGACGCTGAGCCGGGCCGCGATCATCGCCCGCCGCTGCGGCACCGACGCTGCTACAGCCCTCCTCAACGA
GGGGCTTCTCTCCGAGGAGGCGTTCTACCGTGCGCTCGCCCGCCGGCTCGGAGCGCCATTTCTCGTCGGGCCTCTCGCGA
TATGCGAGGGTGTTCCGTACGCGCGCTGTCTCATCTCCGGTGCCGCGCCGCTCGCGGACTGCGAGGGGGGCGAAGCCCTC
GTCGCGGCACCGCGTGGAGCTGCGGTGGCGCGACTGATCGCGGCGGCGGACCGGCTGGCGGAGCCTTCGGCCATCACGAC
CCCAACGGCCCTGAGGCAGGCCCTGTTCGCCCGGTACGGCGCCGCCATTGCCGAGGATGCGTCCGAGACCCTGGGGCGTC
TTCGCCCCGAGTGGTCCTGCCGGCCCGGTCCGCTGGCGATCGACCTTGCCTTGGCCGGCGGCGTGCTCGCCCTCGTCGTC
CTGCTCGCGCGCCTCCCGACGGCGGCGGGTTTCGTCCTGCTGCTGCTGGTGCAGGGTTTGATGCTGGCGCTGCTGACCTT
CCGCCTTGCCGCGGCGGCGATCGGGGCGGCCGAGATCGCGGGCGCCGATGCATCCGAGCCGAGACCGGTTCTGCTGACGG
ACGACGCGCTCCCGACCTACACGGTTCTCGTCGCCCTCTACCGGGAGGCGCCGGTGGTCCCGCGTCTTCTGGGAGCCTTG
CGCCGGCTCGACTATCCGGCGGCCAAGCTCGACATCAAGTTCCTGCTCGAGGCCGACGACGACGAGACGGCCGCGGCTTT
CCGCGCGACACCGCTCCCGGCCCGCTTCGAGATCGTCACCGTGCCGGAGGGGATGCCGCGCACCAAGCCGCGGGCGCTGA
ACGTGGCCCTGCCGCTCGCCCGCGGCGAGCACCTCGTGGTCTACGACGCGGAGGATGTGATCTCGCCCGAACAGCTTCGC
CTCGCCGCGACGCTGTTCGCTCGCGCGCCGGCCTCGACCGCCTGCCTCCAGGGTCGCCTCGTGATCGACAATCACGGCGA
TGGCTGGCTGCCGCGCCTGTTCGCCATCGAGTACGCGGCTCTGTTCGACGTGCTCGGCCCGGCCCTGGCCGCGTGGCGGA
TGCCGACGCCGCTCGGCGGCACCTCGACGCATTTCCGCACCCGCGTCCTGCGCCAGCTGCACGGATGGGACGCCTGGAAC
GTGACCGAGGATGCCGATCTCGGCCTGCGCATGGCGCTCGCGGGCTACCATGTCGGCGACCTGCCGAGCGCGACCTTCGA
GGAGGCGCTCGCCCATCCGCGCAAGTGGCTGCGCCAGCGCACCCGCTGGATGAAGGGCTTCCTGCAGACGAGCTTCACCC
ACGGGCGGCGCCCGCTCGACCTCTATCGCCGTCTCGGCGCGGCGGAGAGCCTGTGCGTGCTGGCGCTCCTGCCCGGCACG
GTCGTCTCGGCCCTGTTCTATCCCTTCATGCTGCTCGGCGGCCTCGCCGACCTGATCATCCCGGCCGAGGACGGCGACAA
CCTCGCCATCGTCAAGCGGGCGGCTTCCACGACGGTGTTCCTCGGCGGGCTCGCGGCGATGTGGCTGCCCGGCCTCGTCG
GTTGCCTCCGGCGCGGGTGGTTCGATCTCGTGCCGCTCGTGCTGCTGCTGCCGGTCTACTTCCTTCTCGGCAGTCTCGCG
GCGTGGCTCGCCGTGTTCGAGCTGGCGCGGCACCCGCACCGCTGGAACAAGACCGAGCACGGGCTGGCTCGCACCTCCCG
CACGGGAGCGCTCGCGCGGCGCCCCTCGGCGGCGATCAGATCCGCTTCGACAGCTCCGCCGCCGTCTCCGCTGCCGGCCG
GTTGA

Upstream 100 bases:

>100_bases
GGGCCCGCGGGAAGCCGTTGCCCTGTCCGACCTCGACCGCCGTCGGAGCAGCCGCGCCGCTCCGCTCCCGCTGGAAATCG
GCTTCCTCGCCACCGAGGGC

Downstream 100 bases:

>100_bases
GGTTGACCGCGCCGACGAAGGCGTTGCGGGCGTCCATCAGGTAGACGAGCGCGGTGTGCTCCATCGTGTAGTCGCCGCTC
GAACCCGGCACCTTCTTGGC

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MSLETLSRAAIIARRCGTDAATALLNEGLLSEEAFYRALARRLGAPFLVGPLAICEGVPYARCLISGAAPLADCEGGEAL
VAAPRGAAVARLIAAADRLAEPSAITTPTALRQALFARYGAAIAEDASETLGRLRPEWSCRPGPLAIDLALAGGVLALVV
LLARLPTAAGFVLLLLVQGLMLALLTFRLAAAAIGAAEIAGADASEPRPVLLTDDALPTYTVLVALYREAPVVPRLLGAL
RRLDYPAAKLDIKFLLEADDDETAAAFRATPLPARFEIVTVPEGMPRTKPRALNVALPLARGEHLVVYDAEDVISPEQLR
LAATLFARAPASTACLQGRLVIDNHGDGWLPRLFAIEYAALFDVLGPALAAWRMPTPLGGTSTHFRTRVLRQLHGWDAWN
VTEDADLGLRMALAGYHVGDLPSATFEEALAHPRKWLRQRTRWMKGFLQTSFTHGRRPLDLYRRLGAAESLCVLALLPGT
VVSALFYPFMLLGGLADLIIPAEDGDNLAIVKRAASTTVFLGGLAAMWLPGLVGCLRRGWFDLVPLVLLLPVYFLLGSLA
AWLAVFELARHPHRWNKTEHGLARTSRTGALARRPSAAIRSASTAPPPSPLPAG

Sequences:

>Translated_614_residues
MSLETLSRAAIIARRCGTDAATALLNEGLLSEEAFYRALARRLGAPFLVGPLAICEGVPYARCLISGAAPLADCEGGEAL
VAAPRGAAVARLIAAADRLAEPSAITTPTALRQALFARYGAAIAEDASETLGRLRPEWSCRPGPLAIDLALAGGVLALVV
LLARLPTAAGFVLLLLVQGLMLALLTFRLAAAAIGAAEIAGADASEPRPVLLTDDALPTYTVLVALYREAPVVPRLLGAL
RRLDYPAAKLDIKFLLEADDDETAAAFRATPLPARFEIVTVPEGMPRTKPRALNVALPLARGEHLVVYDAEDVISPEQLR
LAATLFARAPASTACLQGRLVIDNHGDGWLPRLFAIEYAALFDVLGPALAAWRMPTPLGGTSTHFRTRVLRQLHGWDAWN
VTEDADLGLRMALAGYHVGDLPSATFEEALAHPRKWLRQRTRWMKGFLQTSFTHGRRPLDLYRRLGAAESLCVLALLPGT
VVSALFYPFMLLGGLADLIIPAEDGDNLAIVKRAASTTVFLGGLAAMWLPGLVGCLRRGWFDLVPLVLLLPVYFLLGSLA
AWLAVFELARHPHRWNKTEHGLARTSRTGALARRPSAAIRSASTAPPPSPLPAG
>Mature_613_residues
SLETLSRAAIIARRCGTDAATALLNEGLLSEEAFYRALARRLGAPFLVGPLAICEGVPYARCLISGAAPLADCEGGEALV
AAPRGAAVARLIAAADRLAEPSAITTPTALRQALFARYGAAIAEDASETLGRLRPEWSCRPGPLAIDLALAGGVLALVVL
LARLPTAAGFVLLLLVQGLMLALLTFRLAAAAIGAAEIAGADASEPRPVLLTDDALPTYTVLVALYREAPVVPRLLGALR
RLDYPAAKLDIKFLLEADDDETAAAFRATPLPARFEIVTVPEGMPRTKPRALNVALPLARGEHLVVYDAEDVISPEQLRL
AATLFARAPASTACLQGRLVIDNHGDGWLPRLFAIEYAALFDVLGPALAAWRMPTPLGGTSTHFRTRVLRQLHGWDAWNV
TEDADLGLRMALAGYHVGDLPSATFEEALAHPRKWLRQRTRWMKGFLQTSFTHGRRPLDLYRRLGAAESLCVLALLPGTV
VSALFYPFMLLGGLADLIIPAEDGDNLAIVKRAASTTVFLGGLAAMWLPGLVGCLRRGWFDLVPLVLLLPVYFLLGSLAA
WLAVFELARHPHRWNKTEHGLARTSRTGALARRPSAAIRSASTAPPPSPLPAG

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 65596; Mature: 65465

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLETLSRAAIIARRCGTDAATALLNEGLLSEEAFYRALARRLGAPFLVGPLAICEGVPY
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
ARCLISGAAPLADCEGGEALVAAPRGAAVARLIAAADRLAEPSAITTPTALRQALFARYG
HHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AAIAEDASETLGRLRPEWSCRPGPLAIDLALAGGVLALVVLLARLPTAAGFVLLLLVQGL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MLALLTFRLAAAAIGAAEIAGADASEPRPVLLTDDALPTYTVLVALYREAPVVPRLLGAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHH
RRLDYPAAKLDIKFLLEADDDETAAAFRATPLPARFEIVTVPEGMPRTKPRALNVALPLA
HHCCCCCHHEEEEEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEC
RGEHLVVYDAEDVISPEQLRLAATLFARAPASTACLQGRLVIDNHGDGWLPRLFAIEYAA
CCCEEEEECHHHCCCHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHH
LFDVLGPALAAWRMPTPLGGTSTHFRTRVLRQLHGWDAWNVTEDADLGLRMALAGYHVGD
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
LPSATFEEALAHPRKWLRQRTRWMKGFLQTSFTHGRRPLDLYRRLGAAESLCVLALLPGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHH
VVSALFYPFMLLGGLADLIIPAEDGDNLAIVKRAASTTVFLGGLAAMWLPGLVGCLRRGW
HHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDLVPLVLLLPVYFLLGSLAAWLAVFELARHPHRWNKTEHGLARTSRTGALARRPSAAIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHH
SASTAPPPSPLPAG
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SLETLSRAAIIARRCGTDAATALLNEGLLSEEAFYRALARRLGAPFLVGPLAICEGVPY
CHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
ARCLISGAAPLADCEGGEALVAAPRGAAVARLIAAADRLAEPSAITTPTALRQALFARYG
HHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AAIAEDASETLGRLRPEWSCRPGPLAIDLALAGGVLALVVLLARLPTAAGFVLLLLVQGL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MLALLTFRLAAAAIGAAEIAGADASEPRPVLLTDDALPTYTVLVALYREAPVVPRLLGAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHH
RRLDYPAAKLDIKFLLEADDDETAAAFRATPLPARFEIVTVPEGMPRTKPRALNVALPLA
HHCCCCCHHEEEEEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEC
RGEHLVVYDAEDVISPEQLRLAATLFARAPASTACLQGRLVIDNHGDGWLPRLFAIEYAA
CCCEEEEECHHHCCCHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHH
LFDVLGPALAAWRMPTPLGGTSTHFRTRVLRQLHGWDAWNVTEDADLGLRMALAGYHVGD
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
LPSATFEEALAHPRKWLRQRTRWMKGFLQTSFTHGRRPLDLYRRLGAAESLCVLALLPGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHH
VVSALFYPFMLLGGLADLIIPAEDGDNLAIVKRAASTTVFLGGLAAMWLPGLVGCLRRGW
HHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDLVPLVLLLPVYFLLGSLAAWLAVFELARHPHRWNKTEHGLARTSRTGALARRPSAAIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHH
SASTAPPPSPLPAG
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]