| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is ccrM [H]
Identifier: 218531437
GI number: 218531437
Start: 3687166
End: 3688362
Strand: Reverse
Name: ccrM [H]
Synonym: Mchl_3505
Alternate gene names: 218531437
Gene position: 3688362-3687166 (Counterclockwise)
Preceding gene: 218531444
Following gene: 218531435
Centisome position: 63.84
GC content: 68.09
Gene sequence:
>1197_bases ATGGCTTCCCCGCGTACCGCGGTCGTCGGCGCCACCGCCCGGAATCAAGTCTCGCGTACCGGGCGGATCGCGTCGGCGCC GCGGATGGGTCTTGCACCCTCCGTTCAGCGTCTTCCCAGCACCTTACCCCTCGACGAAATCCTGATCGGCGACTGTATCG CCGCGATGGATCGTCTGCCGGCGGAAAGCGTCGACTGTGTCTTCGCCGACCCGCCCTACAACCTCCAGCTCGGCGAGGCG GGATTGACCCGTCCCGACCAGAGCGTGGTCGATGCCGTCGACGACGACTGGGACAAGTTCTCCAGCTTTTCCGCCTATGA CGACTTCACCCGCGCCTGGCTGAAGGCCGCGCGCCGCGTGATGAAGCCGAACGCCACGCTGTGGGTGATCGGTTCGTATC ACAACATCTTCCGGGTCGGCAGCGCGTTGCAGGATCTCGGTTACTGGATCCTGAACGACATCGTCTGGCGCAAGGCCAAC CCGATGCCGAACTTCCGCGGCAAGCGCTTCACCAACGCGCATGAGACCCTGATCTGGGCCTCGCGCTCGCCACAGGCGAA GTACACCTTCCATTACGATGCTCTGAAGGCCGGCAACGAAGACCTTCAGATGCGCTCGGACTGGTTCATTCCGCTCTGCA CGGGCGAGGAGCGGCTGAAGGACGAGGCGGGCCGCAAGGTCCACCCGACCCAGAAGCCGGAAGCGCTCCTGGCCCGCACG CTGCTGGCGGCGACCAATCCCGGCGACGTGGTGCTCGACCCGTTCTTCGGCACCGGCACGACCGGCGCGGTGGCCAAGCG CCTTGGCCGCCACTTCATCGGCTGCGAGCGCGACCCGACCTACGCCACCGCGGCGCGGGCTCGGATCGACGGTATCGAGA CGCTGTCGGCCGCCTCGCTGGCGCTCGCGACGCCGAAGCGGTCGGAGCCGCGCATCCCGTTCCTGAGCGTGGTCGAAGCG GGCCATGTCCGCCCCGGCGAGACGCTGACCGACGAGCGCCGCCGCTTCCGGGCGACGGTGCGGCCGGACGGCCAGCTCAG CGTCGGGCCGGCGATGGGCTCGATCCACAAGGTCGGCGCCCTGGTGCAGGGCCTGCCCGCCTGCAACGGCTGGACCTTCT GGCACGCCGAGCGCAGCGGAAAACTCGTCTGCATCGACGATTTTCGGACTGAGATGCGCGGCCAAGCCGGGGCGTAG
Upstream 100 bases:
>100_bases GCCGCCCCATATCGAGACGCAACCGTACGGCGACGGCAAACGCGACCTTTACCGTGATCGGGCCATGGTCCGGTTGTCAG TCGCGTAACCGGTGTTTGCC
Downstream 100 bases:
>100_bases CGCTCGTCGCGGTTTCGAAAGGACAAGTCCTTTCGCGGGTGCAGGGCAGAGCCCTGCATCTTTCTATCGTGTCCGAATCG GCTTGGGCGCCTTCTTCACG
Product: DNA methylase N-4/N-6 domain protein
Products: NA
Alternate protein names: M.BabI; Adenine-specific methyltransferase BabI; DNA methyltransferase CcrM; M.CcrMI ortholog [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MASPRTAVVGATARNQVSRTGRIASAPRMGLAPSVQRLPSTLPLDEILIGDCIAAMDRLPAESVDCVFADPPYNLQLGEA GLTRPDQSVVDAVDDDWDKFSSFSAYDDFTRAWLKAARRVMKPNATLWVIGSYHNIFRVGSALQDLGYWILNDIVWRKAN PMPNFRGKRFTNAHETLIWASRSPQAKYTFHYDALKAGNEDLQMRSDWFIPLCTGEERLKDEAGRKVHPTQKPEALLART LLAATNPGDVVLDPFFGTGTTGAVAKRLGRHFIGCERDPTYATAARARIDGIETLSAASLALATPKRSEPRIPFLSVVEA GHVRPGETLTDERRRFRATVRPDGQLSVGPAMGSIHKVGALVQGLPACNGWTFWHAERSGKLVCIDDFRTEMRGQAGA
Sequences:
>Translated_398_residues MASPRTAVVGATARNQVSRTGRIASAPRMGLAPSVQRLPSTLPLDEILIGDCIAAMDRLPAESVDCVFADPPYNLQLGEA GLTRPDQSVVDAVDDDWDKFSSFSAYDDFTRAWLKAARRVMKPNATLWVIGSYHNIFRVGSALQDLGYWILNDIVWRKAN PMPNFRGKRFTNAHETLIWASRSPQAKYTFHYDALKAGNEDLQMRSDWFIPLCTGEERLKDEAGRKVHPTQKPEALLART LLAATNPGDVVLDPFFGTGTTGAVAKRLGRHFIGCERDPTYATAARARIDGIETLSAASLALATPKRSEPRIPFLSVVEA GHVRPGETLTDERRRFRATVRPDGQLSVGPAMGSIHKVGALVQGLPACNGWTFWHAERSGKLVCIDDFRTEMRGQAGA >Mature_397_residues ASPRTAVVGATARNQVSRTGRIASAPRMGLAPSVQRLPSTLPLDEILIGDCIAAMDRLPAESVDCVFADPPYNLQLGEAG LTRPDQSVVDAVDDDWDKFSSFSAYDDFTRAWLKAARRVMKPNATLWVIGSYHNIFRVGSALQDLGYWILNDIVWRKANP MPNFRGKRFTNAHETLIWASRSPQAKYTFHYDALKAGNEDLQMRSDWFIPLCTGEERLKDEAGRKVHPTQKPEALLARTL LAATNPGDVVLDPFFGTGTTGAVAKRLGRHFIGCERDPTYATAARARIDGIETLSAASLALATPKRSEPRIPFLSVVEAG HVRPGETLTDERRRFRATVRPDGQLSVGPAMGSIHKVGALVQGLPACNGWTFWHAERSGKLVCIDDFRTEMRGQAGA
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. CcrM-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=282, Percent_Identity=31.5602836879433, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 43727; Mature: 43596
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPRTAVVGATARNQVSRTGRIASAPRMGLAPSVQRLPSTLPLDEILIGDCIAAMDRLP CCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC AESVDCVFADPPYNLQLGEAGLTRPDQSVVDAVDDDWDKFSSFSAYDDFTRAWLKAARRV CCCCCEEECCCCCCEEECCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHH MKPNATLWVIGSYHNIFRVGSALQDLGYWILNDIVWRKANPMPNFRGKRFTNAHETLIWA HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE SRSPQAKYTFHYDALKAGNEDLQMRSDWFIPLCTGEERLKDEAGRKVHPTQKPEALLART CCCCCCEEEEEEHHHHCCCCCCEECCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHH LLAATNPGDVVLDPFFGTGTTGAVAKRLGRHFIGCERDPTYATAARARIDGIETLSAASL HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHH ALATPKRSEPRIPFLSVVEAGHVRPGETLTDERRRFRATVRPDGQLSVGPAMGSIHKVGA EEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCEEECCCHHHHHHHHH LVQGLPACNGWTFWHAERSGKLVCIDDFRTEMRGQAGA HHHCCCCCCCEEEEEECCCCCEEEEECHHHHHCCCCCC >Mature Secondary Structure ASPRTAVVGATARNQVSRTGRIASAPRMGLAPSVQRLPSTLPLDEILIGDCIAAMDRLP CCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC AESVDCVFADPPYNLQLGEAGLTRPDQSVVDAVDDDWDKFSSFSAYDDFTRAWLKAARRV CCCCCEEECCCCCCEEECCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHH MKPNATLWVIGSYHNIFRVGSALQDLGYWILNDIVWRKANPMPNFRGKRFTNAHETLIWA HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE SRSPQAKYTFHYDALKAGNEDLQMRSDWFIPLCTGEERLKDEAGRKVHPTQKPEALLART CCCCCCEEEEEEHHHHCCCCCCEECCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHH LLAATNPGDVVLDPFFGTGTTGAVAKRLGRHFIGCERDPTYATAARARIDGIETLSAASL HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHH ALATPKRSEPRIPFLSVVEAGHVRPGETLTDERRRFRATVRPDGQLSVGPAMGSIHKVGA EEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCEEECCCHHHHHHHHH LVQGLPACNGWTFWHAERSGKLVCIDDFRTEMRGQAGA HHHCCCCCCCEEEEEECCCCCEEEEECHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]