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The map label for this gene is glcF [H]

Identifier: 218531407

GI number: 218531407

Start: 3659862

End: 3661259

Strand: Reverse

Name: glcF [H]

Synonym: Mchl_3475

Alternate gene names: 218531407

Gene position: 3661259-3659862 (Counterclockwise)

Preceding gene: 218531408

Following gene: 218531406

Centisome position: 63.37

GC content: 68.38

Gene sequence:

>1398_bases
GTGCAGACCAATTTCGCCCCCGAGCAGCTCGCCGACCCCGCCATGGCGGCCTCGGAGAAGATCCTGCGCACCTGCGTGCA
TTGCGGATTCTGTACCGCGACCTGCCCGACCTACCTCCTGCTCGGCGACGAACTCGATTCACCGCGCGGACGCATCTACC
TCATCAAGGACATGCTGGAGGGCGGCAAGCCGGCGAGCCGCGAAGTCGTCAAGCACATCGACCGCTGCCTCTCCTGCCTG
TCCTGCATGACGACCTGTCCGTCGGGCGTGCATTACATGCACCTCGTCGATCACGCCCGCACCCATATCGAGAAGACCTA
CGCACGCCCGCTCTCCGACCGGCTCCTGCGCGCGGTGCTAGCCCTGGTGCTGCCCTATCCGAACCGGTTCCGGGTGGCGC
TGCTCGCGGCCAAGATCGGGGCGCCGTTCCGGCCGCTGGTCGCCCGTCTGCCGCGGGTCGGCAACCGGCTCGCGGCGATG
CTCGACCTCGCCCCGGCGCAACTGCCGAACCGCAACCGCACCGACCGGCCCGGCACCTTCCCCGCCGATCCCTCGGCGCA
GGAGATCAGCGACCTCTTCCAGACCGGTGAGGACAAGGCGCCGGCCAAGCGCCGCGGCCGAGTCGCGCTGCTGCGCGGCT
GCGCCCAGAGCGTCCTGCGGCCGGACTTCAACGAGGCGGCGATCCGCCTGCTCAACCGACACGGGGTCGAGGTGGTCCTG
CCCAAGGGTGAGGGCTGCTGCGGCGCACTGACCCATCACATGGGCAAGGAGGCGAACGCCCACGGCCACGCCAAGCGCAC
CATCGACGCCTGGATCGCCGAGATGGACGGGCCCGGCCTCGATGCCATCGTCGTCACCGCCTCGGGCTGCGGCACGACGA
TCAAGGATTACGGCTTCATGTTCCGCGACGACCCGGCCTATGCCGAGAAGGCCGCACGGGTCTCAGGCATCGCCAAGGAC
GTGACCGAGTACATGGCCGAGATCGGCCTGCTGCCCCCGGTCGAAGATACCGACCTCGTGGTCGCCTACCATTCCGCCTG
CTCGATGCAGCACGGGCAGGCCATCCGCACCGAGCCCAAAACCTTGCTCAAGAAGGCGGGCTTCACGGTGAAGGACGTGC
CGGAGGGCCATATCTGCTGCGGCTCGGCCGGAACCTACAACATCCTCCAGCCGGAGATCGCCGCCCGACTGCGGGATCGC
AAGGTCGCCAATATCGAGCGCGTCCGGCCCGATATCATCGCCACCGGCAATATCGGCTGCGCCACCCAGATCGGGAAAGG
CACCGACATCCCGATCCTGCACACGGTCGAGCTGCTCGACTGGGCCACGGGTGGGCCGCGGCCGGAAGCGTTGGCGCATT
TGAAGGCGCGTCCGGCACCCGTCCCGGCGCACGTTTAA

Upstream 100 bases:

>100_bases
GCGTGCGACACAGCAACAGCTTAGAACTGTTCCGATTGTTCGCCCGCGCGAACGGTTCTAAGACTCGCACGAGAAGTAAG
AAACCGCATCGAGGCGTGTC

Downstream 100 bases:

>100_bases
GGTCAAGATTGAATTTCCCGCTCTGCACAATTGCGGGTCGTCCCTTCCTTGACCTCGCTGCAGGTGCGAATTAGGCCCGC
AACCAGTGTCGGCCCGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MQTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEGGKPASREVVKHIDRCLSCL
SCMTTCPSGVHYMHLVDHARTHIEKTYARPLSDRLLRAVLALVLPYPNRFRVALLAAKIGAPFRPLVARLPRVGNRLAAM
LDLAPAQLPNRNRTDRPGTFPADPSAQEISDLFQTGEDKAPAKRRGRVALLRGCAQSVLRPDFNEAAIRLLNRHGVEVVL
PKGEGCCGALTHHMGKEANAHGHAKRTIDAWIAEMDGPGLDAIVVTASGCGTTIKDYGFMFRDDPAYAEKAARVSGIAKD
VTEYMAEIGLLPPVEDTDLVVAYHSACSMQHGQAIRTEPKTLLKKAGFTVKDVPEGHICCGSAGTYNILQPEIAARLRDR
KVANIERVRPDIIATGNIGCATQIGKGTDIPILHTVELLDWATGGPRPEALAHLKARPAPVPAHV

Sequences:

>Translated_465_residues
MQTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEGGKPASREVVKHIDRCLSCL
SCMTTCPSGVHYMHLVDHARTHIEKTYARPLSDRLLRAVLALVLPYPNRFRVALLAAKIGAPFRPLVARLPRVGNRLAAM
LDLAPAQLPNRNRTDRPGTFPADPSAQEISDLFQTGEDKAPAKRRGRVALLRGCAQSVLRPDFNEAAIRLLNRHGVEVVL
PKGEGCCGALTHHMGKEANAHGHAKRTIDAWIAEMDGPGLDAIVVTASGCGTTIKDYGFMFRDDPAYAEKAARVSGIAKD
VTEYMAEIGLLPPVEDTDLVVAYHSACSMQHGQAIRTEPKTLLKKAGFTVKDVPEGHICCGSAGTYNILQPEIAARLRDR
KVANIERVRPDIIATGNIGCATQIGKGTDIPILHTVELLDWATGGPRPEALAHLKARPAPVPAHV
>Mature_465_residues
MQTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEGGKPASREVVKHIDRCLSCL
SCMTTCPSGVHYMHLVDHARTHIEKTYARPLSDRLLRAVLALVLPYPNRFRVALLAAKIGAPFRPLVARLPRVGNRLAAM
LDLAPAQLPNRNRTDRPGTFPADPSAQEISDLFQTGEDKAPAKRRGRVALLRGCAQSVLRPDFNEAAIRLLNRHGVEVVL
PKGEGCCGALTHHMGKEANAHGHAKRTIDAWIAEMDGPGLDAIVVTASGCGTTIKDYGFMFRDDPAYAEKAARVSGIAKD
VTEYMAEIGLLPPVEDTDLVVAYHSACSMQHGQAIRTEPKTLLKKAGFTVKDVPEGHICCGSAGTYNILQPEIAARLRDR
KVANIERVRPDIIATGNIGCATQIGKGTDIPILHTVELLDWATGGPRPEALAHLKARPAPVPAHV

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=443, Percent_Identity=39.7291196388262, Blast_Score=329, Evalue=2e-91,
Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=26.7782426778243, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 50372; Mature: 50372

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLE
CCCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCCEEEEHHHHC
GGKPASREVVKHIDRCLSCLSCMTTCPSGVHYMHLVDHARTHIEKTYARPLSDRLLRAVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ALVLPYPNRFRVALLAAKIGAPFRPLVARLPRVGNRLAAMLDLAPAQLPNRNRTDRPGTF
HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PADPSAQEISDLFQTGEDKAPAKRRGRVALLRGCAQSVLRPDFNEAAIRLLNRHGVEVVL
CCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE
PKGEGCCGALTHHMGKEANAHGHAKRTIDAWIAEMDGPGLDAIVVTASGCGTTIKDYGFM
ECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCE
FRDDPAYAEKAARVSGIAKDVTEYMAEIGLLPPVEDTDLVVAYHSACSMQHGQAIRTEPK
ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHH
TLLKKAGFTVKDVPEGHICCGSAGTYNILQPEIAARLRDRKVANIERVRPDIIATGNIGC
HHHHHCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
ATQIGKGTDIPILHTVELLDWATGGPRPEALAHLKARPAPVPAHV
CEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQTNFAPEQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLE
CCCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCCEEEEHHHHC
GGKPASREVVKHIDRCLSCLSCMTTCPSGVHYMHLVDHARTHIEKTYARPLSDRLLRAVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ALVLPYPNRFRVALLAAKIGAPFRPLVARLPRVGNRLAAMLDLAPAQLPNRNRTDRPGTF
HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PADPSAQEISDLFQTGEDKAPAKRRGRVALLRGCAQSVLRPDFNEAAIRLLNRHGVEVVL
CCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE
PKGEGCCGALTHHMGKEANAHGHAKRTIDAWIAEMDGPGLDAIVVTASGCGTTIKDYGFM
ECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCE
FRDDPAYAEKAARVSGIAKDVTEYMAEIGLLPPVEDTDLVVAYHSACSMQHGQAIRTEPK
ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHH
TLLKKAGFTVKDVPEGHICCGSAGTYNILQPEIAARLRDRKVANIERVRPDIIATGNIGC
HHHHHCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
ATQIGKGTDIPILHTVELLDWATGGPRPEALAHLKARPAPVPAHV
CEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]