| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218531338
Identifier: 218531338
GI number: 218531338
Start: 3590427
End: 3591521
Strand: Reverse
Name: 218531338
Synonym: Mchl_3406
Alternate gene names: NA
Gene position: 3591521-3590427 (Counterclockwise)
Preceding gene: 218531340
Following gene: 218531337
Centisome position: 62.16
GC content: 67.49
Gene sequence:
>1095_bases ATGACTGCCGCACCGATTCGCTACCATGACGCTATCGAGACGCTGAGCCCCGACGAGAACGAGACCATCGATCGGATCAT CGCCGCGATGACCCACGAGAGCGAGATCACCGCGAAGCGCTACGGGCACGCGGTGCGGGACTCGCATGCCAAGATCAGCG GCGTTGCCGTCGGTACGTTGGAAATCCTCCCTAACCTTCCGCCCGAACTGGCGCAGGGCCTGTTCGCGACGCTGGGCACG CATTCCGTCATCGTTCGCTTCGCGCAGGGGCCCGGCGAGCTCATGAAGGATCGCGTCTCGACCCATCGCGGCATGGCGAT CAAGGTGCTCGGCGTCGAGGGCGACAAGCTGCCCGGCCACGAGGCGCCGACCCAGGACTTCGTCTTCGCCACCGGGCCGG TCTTCCCTAATCCCGACGCCAAGGGTTTCCTGAGCAGCATGAAGCAATTGGAGGCCGGCACCTCCGCGCCGGAAGCGGTG AAGGCCGCCGTCTCCCGGAGCGCGCGGGCGCTCGACGGGATGGTGAAATCGGTGACGGGTGAGAGTTCGCCGCTCCTCGA CTTCTTCGGCCACGTGCCGCACCACCCGCTGGCCGAACCGTATTACTCCCAAGCCGCGCTCCGCTACGGCGACCACGTCG CCAAGCTTGGCGCCTTTCCCGCCTCACCGGCGCAGGCGGCGCTCGCCGACGAGCGGCTCGACACCGACCGCGAGGATGGA AACGTCTTCCGCCATGCGGTGCTGAGCTATCTCGCGGGAAGCGAGGCGGTGTTCGACATTCGCGTCCAGCTCTGCCTGAA CCTCGATGAGATGCCGGTCGAGGATGCCTCGAAGCGCTGGGACGAGACGCAGAGCCCCTATCGCACCGTCGCCCGCCTCG TTCTGCCGGCGCAGGATGCGTTCAGCGAGGCCCGGCGGAACTACGCCGACGAAATGCTCTCCTTCCGTCCCGCTCACAGC CTGGCGGCGCACCGGCCACTGGGTTCGCTGATGCGGGCGCGGCTGAAGACCTATCAGGCGCTCTCTCGCTTTCGCCACGC GCGCAACCGCGTGCCGGAGGTGGAGCCGGCCTCGATCGACGACGTGCCGGCCTGA
Upstream 100 bases:
>100_bases CAAAGATACGCGATGAGAAGTTGCAGGCCGGGGCGCGGCCCGAACTTTCGCGCGTTGTCCCGGTTCGCTCCCTCGGATTT GCTGAGACGCGAGACTTTTC
Downstream 100 bases:
>100_bases CGGGGACAACGCTTTCGTGAAGGACCCCGGCCGCGTGCGCCGGGGTTGCGCTGGCAATCCCGCCGATCATCGGCCCGAGG TTGTCCGACCATGACCAGAT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTAAPIRYHDAIETLSPDENETIDRIIAAMTHESEITAKRYGHAVRDSHAKISGVAVGTLEILPNLPPELAQGLFATLGT HSVIVRFAQGPGELMKDRVSTHRGMAIKVLGVEGDKLPGHEAPTQDFVFATGPVFPNPDAKGFLSSMKQLEAGTSAPEAV KAAVSRSARALDGMVKSVTGESSPLLDFFGHVPHHPLAEPYYSQAALRYGDHVAKLGAFPASPAQAALADERLDTDREDG NVFRHAVLSYLAGSEAVFDIRVQLCLNLDEMPVEDASKRWDETQSPYRTVARLVLPAQDAFSEARRNYADEMLSFRPAHS LAAHRPLGSLMRARLKTYQALSRFRHARNRVPEVEPASIDDVPA
Sequences:
>Translated_364_residues MTAAPIRYHDAIETLSPDENETIDRIIAAMTHESEITAKRYGHAVRDSHAKISGVAVGTLEILPNLPPELAQGLFATLGT HSVIVRFAQGPGELMKDRVSTHRGMAIKVLGVEGDKLPGHEAPTQDFVFATGPVFPNPDAKGFLSSMKQLEAGTSAPEAV KAAVSRSARALDGMVKSVTGESSPLLDFFGHVPHHPLAEPYYSQAALRYGDHVAKLGAFPASPAQAALADERLDTDREDG NVFRHAVLSYLAGSEAVFDIRVQLCLNLDEMPVEDASKRWDETQSPYRTVARLVLPAQDAFSEARRNYADEMLSFRPAHS LAAHRPLGSLMRARLKTYQALSRFRHARNRVPEVEPASIDDVPA >Mature_363_residues TAAPIRYHDAIETLSPDENETIDRIIAAMTHESEITAKRYGHAVRDSHAKISGVAVGTLEILPNLPPELAQGLFATLGTH SVIVRFAQGPGELMKDRVSTHRGMAIKVLGVEGDKLPGHEAPTQDFVFATGPVFPNPDAKGFLSSMKQLEAGTSAPEAVK AAVSRSARALDGMVKSVTGESSPLLDFFGHVPHHPLAEPYYSQAALRYGDHVAKLGAFPASPAQAALADERLDTDREDGN VFRHAVLSYLAGSEAVFDIRVQLCLNLDEMPVEDASKRWDETQSPYRTVARLVLPAQDAFSEARRNYADEMLSFRPAHSL AAHRPLGSLMRARLKTYQALSRFRHARNRVPEVEPASIDDVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020835 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase [H]
EC number: NA
Molecular weight: Translated: 39642; Mature: 39511
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPIRYHDAIETLSPDENETIDRIIAAMTHESEITAKRYGHAVRDSHAKISGVAVGTL CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHH EILPNLPPELAQGLFATLGTHSVIVRFAQGPGELMKDRVSTHRGMAIKVLGVEGDKLPGH HHCCCCCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC EAPTQDFVFATGPVFPNPDAKGFLSSMKQLEAGTSAPEAVKAAVSRSARALDGMVKSVTG CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ESSPLLDFFGHVPHHPLAEPYYSQAALRYGDHVAKLGAFPASPAQAALADERLDTDREDG CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCH NVFRHAVLSYLAGSEAVFDIRVQLCLNLDEMPVEDASKRWDETQSPYRTVARLVLPAQDA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHHH FSEARRNYADEMLSFRPAHSLAAHRPLGSLMRARLKTYQALSRFRHARNRVPEVEPASID HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DVPA CCCC >Mature Secondary Structure TAAPIRYHDAIETLSPDENETIDRIIAAMTHESEITAKRYGHAVRDSHAKISGVAVGTL CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHH EILPNLPPELAQGLFATLGTHSVIVRFAQGPGELMKDRVSTHRGMAIKVLGVEGDKLPGH HHCCCCCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC EAPTQDFVFATGPVFPNPDAKGFLSSMKQLEAGTSAPEAVKAAVSRSARALDGMVKSVTG CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ESSPLLDFFGHVPHHPLAEPYYSQAALRYGDHVAKLGAFPASPAQAALADERLDTDREDG CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCH NVFRHAVLSYLAGSEAVFDIRVQLCLNLDEMPVEDASKRWDETQSPYRTVARLVLPAQDA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHHH FSEARRNYADEMLSFRPAHSLAAHRPLGSLMRARLKTYQALSRFRHARNRVPEVEPASID HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DVPA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]