| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218531288
Identifier: 218531288
GI number: 218531288
Start: 3533997
End: 3535007
Strand: Reverse
Name: 218531288
Synonym: Mchl_3344
Alternate gene names: NA
Gene position: 3535007-3533997 (Counterclockwise)
Preceding gene: 218531292
Following gene: 218531279
Centisome position: 61.18
GC content: 71.32
Gene sequence:
>1011_bases TTGGGGCTCCAAGACAAGGCGAGGACTACGGCACCGGACCCAAGGCTCTTGCGCGCGGCGGTCGAAGCGTCCGGCGAGGC CATCCTGATCACCTCCGCCGACCTCGACGAGCCGGGGCCGTTGATCGAGTACGCCAATCCCGCTTTCACCCGGATGACCG GCTACGGTGCCCATGAGGTCGTCGGACGCTCGCCGCGGCTCTTGCAGGGGCCGCGCACGGACCGGACCGTCTTGGACAGC CTACGCGCCGCCCTCGAAGCCGGTGAGCCCACGCAGGCCGAGGCGGTCAACTATCGCAAGGACGGCTCGACCTACGTGGT CGAGTGGCTCATCACCCCGGTCCGCGAGGCAGACGGGCGCCTTACCCACTGGGTCGCGACGCAGCGGGACGTGACGGGGC GGCGCGCCCACGAGGACCGCCAAGCCATGATGGTGCGCGAGCTGCACCACCGGGTGAAGAACACACTCGCTACCGTCCAG GCCGTTCTGAACGCCACCGCGCGCTCCCCCCTCCCGGTCTCCGAGTTCATCCGCGCCTTCTCGGGCCGGATCGCCTCGCT GGCGCGGACGCACGCGCTGATCACCGAGGACGTCGCTCAGGCCGCCTCATTCGAGGGGCTGCTGCGGGCCGAACTCGACC CTTACGGCGAGAAGGGGCGCCTGACGCTGGAAGGCCCCCGGATCGTGCTGCCGTCCGAGCTGGCGGTGCCGGTTGGCATG GCGCTGCACGAGCTCACCACTAATGCCCTGCGGCACGGCTCGCTCGCCGATCCGAACGGCCGCCTGCAGGTGACGTGGTG GGTCGAGGACGGCGCCGCCGGCCGCGCCCTGCGCTGGGACTGGGCCGAGCATGACGGGCCGCCGGCCACGCATCCGACGC GGGAGGGCTTCGGCCACCGGCTTCTCAACAAGGTCCTGGCCACCCAAACCGGGGCGGAGGTCGACGTCGACTTCGCGCCT GACGGGCTGCGGGTGTCGGTGCGCATGCCGTTGCCCGCTTCCCGCGCCTGA
Upstream 100 bases:
>100_bases AGGGATATCGCCGGGCGCCGGCTACGCAGGCGGGCAACCCGCAGGCGCGTCGCAGGTTAACTGGCAGCCCCGCGGTTTTC GGCAGGGTTGGGAGACGACG
Downstream 100 bases:
>100_bases GGGTCGCCAGCCCGCGTCGGGACGCCTGCTCGAGCGGTACAATCCTTCATGCCGCCCTTCTCGCGGCGCCAGGCCTACAG GCCTACAGGCTGATGATACG
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MGLQDKARTTAPDPRLLRAAVEASGEAILITSADLDEPGPLIEYANPAFTRMTGYGAHEVVGRSPRLLQGPRTDRTVLDS LRAALEAGEPTQAEAVNYRKDGSTYVVEWLITPVREADGRLTHWVATQRDVTGRRAHEDRQAMMVRELHHRVKNTLATVQ AVLNATARSPLPVSEFIRAFSGRIASLARTHALITEDVAQAASFEGLLRAELDPYGEKGRLTLEGPRIVLPSELAVPVGM ALHELTTNALRHGSLADPNGRLQVTWWVEDGAAGRALRWDWAEHDGPPATHPTREGFGHRLLNKVLATQTGAEVDVDFAP DGLRVSVRMPLPASRA
Sequences:
>Translated_336_residues MGLQDKARTTAPDPRLLRAAVEASGEAILITSADLDEPGPLIEYANPAFTRMTGYGAHEVVGRSPRLLQGPRTDRTVLDS LRAALEAGEPTQAEAVNYRKDGSTYVVEWLITPVREADGRLTHWVATQRDVTGRRAHEDRQAMMVRELHHRVKNTLATVQ AVLNATARSPLPVSEFIRAFSGRIASLARTHALITEDVAQAASFEGLLRAELDPYGEKGRLTLEGPRIVLPSELAVPVGM ALHELTTNALRHGSLADPNGRLQVTWWVEDGAAGRALRWDWAEHDGPPATHPTREGFGHRLLNKVLATQTGAEVDVDFAP DGLRVSVRMPLPASRA >Mature_335_residues GLQDKARTTAPDPRLLRAAVEASGEAILITSADLDEPGPLIEYANPAFTRMTGYGAHEVVGRSPRLLQGPRTDRTVLDSL RAALEAGEPTQAEAVNYRKDGSTYVVEWLITPVREADGRLTHWVATQRDVTGRRAHEDRQAMMVRELHHRVKNTLATVQA VLNATARSPLPVSEFIRAFSGRIASLARTHALITEDVAQAASFEGLLRAELDPYGEKGRLTLEGPRIVLPSELAVPVGMA LHELTTNALRHGSLADPNGRLQVTWWVEDGAAGRALRWDWAEHDGPPATHPTREGFGHRLLNKVLATQTGAEVDVDFAPD GLRVSVRMPLPASRA
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 36655; Mature: 36524
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLQDKARTTAPDPRLLRAAVEASGEAILITSADLDEPGPLIEYANPAFTRMTGYGAHEV CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCCCHHHHHCCCCHHHH VGRSPRLLQGPRTDRTVLDSLRAALEAGEPTQAEAVNYRKDGSTYVVEWLITPVREADGR HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEEHHHHHHCCCC LTHWVATQRDVTGRRAHEDRQAMMVRELHHRVKNTLATVQAVLNATARSPLPVSEFIRAF EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SGRIASLARTHALITEDVAQAASFEGLLRAELDPYGEKGRLTLEGPRIVLPSELAVPVGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCHHHHHHHH ALHELTTNALRHGSLADPNGRLQVTWWVEDGAAGRALRWDWAEHDGPPATHPTREGFGHR HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHH LLNKVLATQTGAEVDVDFAPDGLRVSVRMPLPASRA HHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCC >Mature Secondary Structure GLQDKARTTAPDPRLLRAAVEASGEAILITSADLDEPGPLIEYANPAFTRMTGYGAHEV CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCCCHHHHHCCCCHHHH VGRSPRLLQGPRTDRTVLDSLRAALEAGEPTQAEAVNYRKDGSTYVVEWLITPVREADGR HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEEHHHHHHCCCC LTHWVATQRDVTGRRAHEDRQAMMVRELHHRVKNTLATVQAVLNATARSPLPVSEFIRAF EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SGRIASLARTHALITEDVAQAASFEGLLRAELDPYGEKGRLTLEGPRIVLPSELAVPVGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCHHHHHHHH ALHELTTNALRHGSLADPNGRLQVTWWVEDGAAGRALRWDWAEHDGPPATHPTREGFGHR HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHH LLNKVLATQTGAEVDVDFAPDGLRVSVRMPLPASRA HHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA