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The map label for this gene is flgF [H]

Identifier: 218531221

GI number: 218531221

Start: 3449890

End: 3450630

Strand: Reverse

Name: flgF [H]

Synonym: Mchl_3272

Alternate gene names: 218531221

Gene position: 3450630-3449890 (Counterclockwise)

Preceding gene: 218531226

Following gene: 218531220

Centisome position: 59.72

GC content: 70.31

Gene sequence:

>741_bases
ATGCAGAACGCGCTCTTCGTCGGAGTCTCCGCCCAGACCGCCCTGGCTCGCGAACTCGACGTCATCGCCAACAACATGGC
CAACGTCTCGACCACCGGCTTCAAGGCGCGCTCGGCCCGCTTCCAGGAATATCTGATGCCGGTGGCCTCCGCCGACAGCT
TCCAGCGGACCGACCGGCGCCTCTCCTACGTCATCGACCAGGGCACCCCGCTCGACCTCACGCAGGGGCCGGTGGAGCCT
GACAGCAACCCGATGCACGTGGCCCTGCGCGGCGACGCCTTCCTCGCCGTCCAGACGCCGCAGGGCCTGCGCTACACCCG
CAACGGCGCCTTCGAACTCGACGCCACGGGCAATCTCGTCACCTCGGACGGCCACGCGGTGCAGGGCGACGGCGGCCCGA
TCACCATCGGCCAGCAGGAGACGGGGCTCGCCATCGCTCCCGACGGCACGATCTCGACCAATCTCGGCATCCGCGGCCGG
CTGCGCCTCGTCACCTTCGCCAACGCGCAGGCGCTGAAGTCGGAGGGCGCCAACCTGTTCTCGTCCGAGGCGCCCGCCCG
GCCCGCCGGCCCCGGTGCCCATCTGGAGCCCGGCGCGCTGGAGCGCTCCAACGTAAAGCCGGTGGTCGAGATGACCCGGC
TGATGGACGTGAACCGCACCTACTCGATGGTCTCGAGCGTGATCTCGCGCCTCGACGACCTGCGCGGCACGGCGATCCGC
CGTCTCGCCGACGTCGCCTGA

Upstream 100 bases:

>100_bases
TTCATTCAAATGACTGAATGTTAAGGTAAAAACGAAGTTTCCGGGATTGGCACGGCCCCTGCGGTGGAGGGCATGAACCC
GTCGCCATCCGAGGCACACC

Downstream 100 bases:

>100_bases
CCCCCCGGCTCTAAGGACCGACGCCGATGCGCGCCCTCTACGCCGCCGCCACGGGCATGGCGGCCCAGGAACTCAACGTT
CAGGTCATCTCGAACAACAT

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRRLSYVIDQGTPLDLTQGPVEP
DSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLVTSDGHAVQGDGGPITIGQQETGLAIAPDGTISTNLGIRGR
LRLVTFANAQALKSEGANLFSSEAPARPAGPGAHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR
RLADVA

Sequences:

>Translated_246_residues
MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRRLSYVIDQGTPLDLTQGPVEP
DSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLVTSDGHAVQGDGGPITIGQQETGLAIAPDGTISTNLGIRGR
LRLVTFANAQALKSEGANLFSSEAPARPAGPGAHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR
RLADVA
>Mature_246_residues
MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRRLSYVIDQGTPLDLTQGPVEP
DSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLVTSDGHAVQGDGGPITIGQQETGLAIAPDGTISTNLGIRGR
LRLVTFANAQALKSEGANLFSSEAPARPAGPGAHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR
RLADVA

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=256, Percent_Identity=34.765625, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787317, Length=259, Percent_Identity=32.8185328185328, Blast_Score=100, Evalue=9e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26179; Mature: 26179

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRR
CCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV
EEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCEEECCCCEEEECCCCEE
TSDGHAVQGDGGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGANLF
ECCCCEEECCCCEEEECCCCCCEEECCCCCEECCCCCCEEEEEEEECCHHHHHHCCCCHH
SSEAPARPAGPGAHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RLADVA
HHHHCC
>Mature Secondary Structure
MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRR
CCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV
EEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCEEECCCCEEEECCCCEE
TSDGHAVQGDGGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGANLF
ECCCCEEECCCCEEEECCCCCCEEECCCCCEECCCCCCEEEEEEEECCHHHHHHCCCCHH
SSEAPARPAGPGAHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RLADVA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]