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The map label for this gene is flgH [H]

Identifier: 218531218

GI number: 218531218

Start: 3447202

End: 3447954

Strand: Reverse

Name: flgH [H]

Synonym: Mchl_3269

Alternate gene names: 218531218

Gene position: 3447954-3447202 (Counterclockwise)

Preceding gene: 218531219

Following gene: 218531213

Centisome position: 59.67

GC content: 68.79

Gene sequence:

>753_bases
ATGATCGCTCGCCGTCCCCGCCTCTCCCGCCTTGCCGTGATTCTGGCGCTCGCCCCGCTCGGCGCCTGCAACACCGTGGA
CCGCCTCTCCCAGGTCGGCGCCACACCGACGCTCTCGGCGATCGAGGATCCGACCGCCCAGCCCGGCTACCGGCCGGTGC
GCATGGCGATGCCCGACACGAGCCCTGTCTCCTACGCGCCGAACTCCCTGTGGCGCACGGGTTCGCGGGCCTTCTTCAAG
GACCAGCGCGCCGCACGGATCGGCGACCTGCTCACCATCAAGGTCAACGTGACCGACCGGGCCAACCTCAACAACGAGAC
CAAGCGTTCGCGGACCAACGCGGAAGGCTTCGGCCTGCCCAACGCCTTCGGCCTGGAAAACAGCGCGGGTGTGGCCGCGG
CCGGCATCGCCCCGGACAAGCTCATCAACGGCACCTCGACCTCGTCGAGCGACGGGGCCGGCTCGGTGCAGCGCGCCGAG
ACGGTGACCACCAACGTCGCCGCGGTCGTCACGCAGGTGCTGCCCAACGGCAACCTCGTAGTCGAGGGCAAGCAGGAGAT
CCGCATCAATTTCGAGGTGCGCGAGCTGATCGTGGCCGGCGTGGTGCGGCCCGAGGACATCGAGTCGGACAACACCATCG
ATTCGAGCAAGATCGCCCAGGCCCGCATCGCCTATGGCGGCCGCGGCCAGATCACCGACGTGCAGCAGCCCCGCTACGGC
CAGCAGCTCGTGGACATCCTGCTGCCGTTCTAA

Upstream 100 bases:

>100_bases
CTCCGCAGCCTCAGCCGATCCTTCAGGCCAGCGCGGCCCCGTGAACCGCGCCGCGTCCCTTGCGTCTTTCTCCCCTTCCC
GCTAGCGCCGGACCCATCCG

Downstream 100 bases:

>100_bases
CGGCTCCCGCGAAACGCTCGCTCCACCGCCGTGCCCGAAGGGGAAACGAGCGGTGACCGGGCGTTCGGTGAGTTACTTCC
AAGCCGGACGGCGCCGGCGC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIARRPRLSRLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDTSPVSYAPNSLWRTGSRAFFK
DQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLPNAFGLENSAGVAAAGIAPDKLINGTSTSSSDGAGSVQRAE
TVTTNVAAVVTQVLPNGNLVVEGKQEIRINFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYG
QQLVDILLPF

Sequences:

>Translated_250_residues
MIARRPRLSRLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDTSPVSYAPNSLWRTGSRAFFK
DQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLPNAFGLENSAGVAAAGIAPDKLINGTSTSSSDGAGSVQRAE
TVTTNVAAVVTQVLPNGNLVVEGKQEIRINFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYG
QQLVDILLPF
>Mature_250_residues
MIARRPRLSRLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDTSPVSYAPNSLWRTGSRAFFK
DQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLPNAFGLENSAGVAAAGIAPDKLINGTSTSSSDGAGSVQRAE
TVTTNVAAVVTQVLPNGNLVVEGKQEIRINFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYG
QQLVDILLPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26666; Mature: 26666

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARRPRLSRLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDT
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEECCCC
SPVSYAPNSLWRTGSRAFFKDQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLP
CCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCCC
NAFGLENSAGVAAAGIAPDKLINGTSTSSSDGAGSVQRAETVTTNVAAVVTQVLPNGNLV
CCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
VEGKQEIRINFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYG
EECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCHHH
QQLVDILLPF
HHHHHHHCCC
>Mature Secondary Structure
MIARRPRLSRLAVILALAPLGACNTVDRLSQVGATPTLSAIEDPTAQPGYRPVRMAMPDT
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEECCCC
SPVSYAPNSLWRTGSRAFFKDQRAARIGDLLTIKVNVTDRANLNNETKRSRTNAEGFGLP
CCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCCC
NAFGLENSAGVAAAGIAPDKLINGTSTSSSDGAGSVQRAETVTTNVAAVVTQVLPNGNLV
CCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
VEGKQEIRINFEVRELIVAGVVRPEDIESDNTIDSSKIAQARIAYGGRGQITDVQQPRYG
EECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCHHH
QQLVDILLPF
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA