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The map label for this gene is ydeP [H]

Identifier: 218531134

GI number: 218531134

Start: 3362431

End: 3364746

Strand: Reverse

Name: ydeP [H]

Synonym: Mchl_3184

Alternate gene names: 218531134

Gene position: 3364746-3362431 (Counterclockwise)

Preceding gene: 218531135

Following gene: 218531133

Centisome position: 58.23

GC content: 66.32

Gene sequence:

>2316_bases
ATGCCCGACGAGAAGATCGAAGCCTATACCGACCCGGCCGGCGGATGGGGGTCGGCCCGCTCGCTCATCGACATCCTGAC
CCGCGAGGAGATCCCGGCTTCCGGCGCGGCCATGCTGATGAAGCAGAACAAGCCGGGCGGCTTCATGTGCGTATCCTGCG
CATGGTCGAAGCCGGCCAAGCCGTCCACGTTCGAATATTGCGAGAACGGCGCCAAGGCGACCGCCTGGGAACAGACCCGC
AAGCGGATCGGCCCCGACTTCTTCGAGCGCCACTCGGTCACCGAATTGCTGACTTGGCCGGACTATGACCTTGAGGAGAA
GGGCCGGCTCACGCACCCGCTGCGCTACGATCCGCAGCGTGACCGCTACGTGTCCGTCTCATGGGAAGAGGCCTTTGCGG
AGATCGGCCGCGAGCTGAAGGCTCTGCGCGAGACGGACCCGACCTCGGCCGTGTTCTACTCGTCGGGCCGGGCGTCGCTG
GAGACGAGCTACATGTACGCGCTGTTCGCGCGCATGTACGGCAACAACAACCTGCCCGACTCCTCCAACATGTGCCACGA
ATCGACCTCGAAGGCGCTGCCGCAATCGATCGGCGTGCCCGTCGGCACGACGGTGCTGGAGGATTTCGAGACCACCGACC
TGATCCTGTTCTTCGGACAGAATGTCGGTTCGAATTCGCCGCGGATGCTCCACCCGCTGCAGGACGCCCGCCGCCGGGGC
GTGCCCATCATCACCTTCAACCCGCTGCGGGAGCGCGGGCTGGAGCGCTTCACCAACCCGCAATCGCCCGTCGAGATGCT
GACCCATTCCTCGACGCAGATCTCGACCCAGTATCACCAGGTGAAGGCCGGCGGCGACATCGCGGCGCTCGGCGGCATCT
GCAAGGCGCTCTTCGCCATGGACCGAGAGGCGCAGGCGGAAGGGCGCCCGCGCATTTTCGATATCGATTTCATCGCCGAG
CACACCCACGGCTTCGAAAAGTTCGAAAAGTTCTGCGACCGGCTCGAATGGCCGGCGCTCGAGACCAAGTCCGGCCTGAG
GCGCGAGGGGATGGAGGCGGCCGCTGCCGTCTACGCCCGCGCGCGGGCGGTGATCGGCATCTATGGGATGGGCCTGACCC
AGCACCGCCGCGGCACCGAGACGGTGCAGATGTTCGTCAACCTGCTGCTTCTGCGCGGCAATATCGGGCGGCCCGGCGCC
GGCATCTGCCCCGTGCGCGGCCATTCCAACGTGCAGGGCCAGCGCACCGTCGGCATCGCCGACGAGCCGTCGCTGGTGCC
GCTCGATAAGCTCAAGGCGATGTACGGCTTCGAGCCGCCCCGCGAGAAGGGGATGAACACGGTCGAGACCTGCGAAGGCG
TTCTCTCCGGCAAGGTGAAGGCCTTTGTCGGGCTCGGCGGCAATTTCATCCGCGCGGTGCCCGACACGAAGCGTATGGAG
GAGGCGTGGCGCTCGCTGCGTCTCACCGTCCAGGTCTCGACCAAGCTCAACCGCTCACACCTCGTGCACGGTGAGGTCGC
CTACATCCTGCCCTGCCTCGGCCGGATCGAGGTGGACGAGCAGGCGAGCGGGCCGCAGGCGGTGTCGATGGAGGACTCGA
CCTCCTGCTTCCACGGCTCGCGCGGCGTCGCCCGGCCGGTGAGCGACCATGTGCGCTCCGAGCCCTGGATCGTGGCGCAA
CTGGCTAAGGCGACGCTGCCAGCCAACCCCAAGGTCGATTGGAACGCCTGGGTCGGCGATTACGCGCAGGTGCGCGACGC
CATCGAGGCGACCTATCCGGAGAAGTTCAAGAACTTCAACGCGCGTCTGTTCGAGCCCGGCGGGCAGCACAAGCCGATCG
CCGCGCGCGAGCGCAAATGGGAGACGCCCACCGGCAAGGCGAACTTCATCGTGCCGCCGGACGGGCTCGACATGGACCCG
GACATGAAGAGCGACCGGCGCGACGTGCTCGACCTCATCACGCTGCGCTCGAACGACCAGTTCAACACCACGATCTACGG
CTATCACGACCGCTTCCGCGGGGTGAAAGGCACCCGCCAAGTGCTGTTCATGAACGAGAACGACATCGAGCGGCTGCAAC
TCGCCGATGGCGAGACCGTCGATGTCGTGACCGAGGCCGCCGACGAGTTCGCCCGCGAGGTGAAGGGCCTGAGGATCGTC
AAATACGACATCCCCGCCGGCAATTGCGCCGGCTACTACCCGGAGCTGAACGTGCTGATCCCGCTCTGGCACCACGATGC
CCAGGCCAAGGTGCCGGCGGCCAAGGCGATTCCCGTGCGGATCGCCAAGGCGGCGACATTGGCGGTGAGGGACTGA

Upstream 100 bases:

>100_bases
CGCGTGGCGCTTCTCACAGGGCCGTAGGCATCGTCGCACGGGCGGAACTCTGCGTTTGGCGCGGATGTTGGCCGGAGGTT
CACGCGAAGCGAGCCCGGCC

Downstream 100 bases:

>100_bases
GCAGGGGCTCGTCCGGCTCCGCCGGCTCGGCGCCCGACGGCGATCAAGATTGTACGGCGTGCAAATCATCACTTGCACGC
TGTGCAAACTAGGCTCATCC

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 771; Mature: 770

Protein sequence:

>771_residues
MPDEKIEAYTDPAGGWGSARSLIDILTREEIPASGAAMLMKQNKPGGFMCVSCAWSKPAKPSTFEYCENGAKATAWEQTR
KRIGPDFFERHSVTELLTWPDYDLEEKGRLTHPLRYDPQRDRYVSVSWEEAFAEIGRELKALRETDPTSAVFYSSGRASL
ETSYMYALFARMYGNNNLPDSSNMCHESTSKALPQSIGVPVGTTVLEDFETTDLILFFGQNVGSNSPRMLHPLQDARRRG
VPIITFNPLRERGLERFTNPQSPVEMLTHSSTQISTQYHQVKAGGDIAALGGICKALFAMDREAQAEGRPRIFDIDFIAE
HTHGFEKFEKFCDRLEWPALETKSGLRREGMEAAAAVYARARAVIGIYGMGLTQHRRGTETVQMFVNLLLLRGNIGRPGA
GICPVRGHSNVQGQRTVGIADEPSLVPLDKLKAMYGFEPPREKGMNTVETCEGVLSGKVKAFVGLGGNFIRAVPDTKRME
EAWRSLRLTVQVSTKLNRSHLVHGEVAYILPCLGRIEVDEQASGPQAVSMEDSTSCFHGSRGVARPVSDHVRSEPWIVAQ
LAKATLPANPKVDWNAWVGDYAQVRDAIEATYPEKFKNFNARLFEPGGQHKPIAARERKWETPTGKANFIVPPDGLDMDP
DMKSDRRDVLDLITLRSNDQFNTTIYGYHDRFRGVKGTRQVLFMNENDIERLQLADGETVDVVTEAADEFAREVKGLRIV
KYDIPAGNCAGYYPELNVLIPLWHHDAQAKVPAAKAIPVRIAKAATLAVRD

Sequences:

>Translated_771_residues
MPDEKIEAYTDPAGGWGSARSLIDILTREEIPASGAAMLMKQNKPGGFMCVSCAWSKPAKPSTFEYCENGAKATAWEQTR
KRIGPDFFERHSVTELLTWPDYDLEEKGRLTHPLRYDPQRDRYVSVSWEEAFAEIGRELKALRETDPTSAVFYSSGRASL
ETSYMYALFARMYGNNNLPDSSNMCHESTSKALPQSIGVPVGTTVLEDFETTDLILFFGQNVGSNSPRMLHPLQDARRRG
VPIITFNPLRERGLERFTNPQSPVEMLTHSSTQISTQYHQVKAGGDIAALGGICKALFAMDREAQAEGRPRIFDIDFIAE
HTHGFEKFEKFCDRLEWPALETKSGLRREGMEAAAAVYARARAVIGIYGMGLTQHRRGTETVQMFVNLLLLRGNIGRPGA
GICPVRGHSNVQGQRTVGIADEPSLVPLDKLKAMYGFEPPREKGMNTVETCEGVLSGKVKAFVGLGGNFIRAVPDTKRME
EAWRSLRLTVQVSTKLNRSHLVHGEVAYILPCLGRIEVDEQASGPQAVSMEDSTSCFHGSRGVARPVSDHVRSEPWIVAQ
LAKATLPANPKVDWNAWVGDYAQVRDAIEATYPEKFKNFNARLFEPGGQHKPIAARERKWETPTGKANFIVPPDGLDMDP
DMKSDRRDVLDLITLRSNDQFNTTIYGYHDRFRGVKGTRQVLFMNENDIERLQLADGETVDVVTEAADEFAREVKGLRIV
KYDIPAGNCAGYYPELNVLIPLWHHDAQAKVPAAKAIPVRIAKAATLAVRD
>Mature_770_residues
PDEKIEAYTDPAGGWGSARSLIDILTREEIPASGAAMLMKQNKPGGFMCVSCAWSKPAKPSTFEYCENGAKATAWEQTRK
RIGPDFFERHSVTELLTWPDYDLEEKGRLTHPLRYDPQRDRYVSVSWEEAFAEIGRELKALRETDPTSAVFYSSGRASLE
TSYMYALFARMYGNNNLPDSSNMCHESTSKALPQSIGVPVGTTVLEDFETTDLILFFGQNVGSNSPRMLHPLQDARRRGV
PIITFNPLRERGLERFTNPQSPVEMLTHSSTQISTQYHQVKAGGDIAALGGICKALFAMDREAQAEGRPRIFDIDFIAEH
THGFEKFEKFCDRLEWPALETKSGLRREGMEAAAAVYARARAVIGIYGMGLTQHRRGTETVQMFVNLLLLRGNIGRPGAG
ICPVRGHSNVQGQRTVGIADEPSLVPLDKLKAMYGFEPPREKGMNTVETCEGVLSGKVKAFVGLGGNFIRAVPDTKRMEE
AWRSLRLTVQVSTKLNRSHLVHGEVAYILPCLGRIEVDEQASGPQAVSMEDSTSCFHGSRGVARPVSDHVRSEPWIVAQL
AKATLPANPKVDWNAWVGDYAQVRDAIEATYPEKFKNFNARLFEPGGQHKPIAARERKWETPTGKANFIVPPDGLDMDPD
MKSDRRDVLDLITLRSNDQFNTTIYGYHDRFRGVKGTRQVLFMNENDIERLQLADGETVDVVTEAADEFAREVKGLRIVK
YDIPAGNCAGYYPELNVLIPLWHHDAQAKVPAAKAIPVRIAKAATLAVRD

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=760, Percent_Identity=45.9210526315789, Blast_Score=678, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=397, Percent_Identity=26.448362720403, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1788534, Length=428, Percent_Identity=22.8971962616822, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 85836; Mature: 85705

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEKIEAYTDPAGGWGSARSLIDILTREEIPASGAAMLMKQNKPGGFMCVSCAWSKPAK
CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCC
PSTFEYCENGAKATAWEQTRKRIGPDFFERHSVTELLTWPDYDLEEKGRLTHPLRYDPQR
CCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DRYVSVSWEEAFAEIGRELKALRETDPTSAVFYSSGRASLETSYMYALFARMYGNNNLPD
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
SSNMCHESTSKALPQSIGVPVGTTVLEDFETTDLILFFGQNVGSNSPRMLHPLQDARRRG
CCCHHHHHHHHHCHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCEECCHHHHHHCC
VPIITFNPLRERGLERFTNPQSPVEMLTHSSTQISTQYHQVKAGGDIAALGGICKALFAM
CCEEEECHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHEEECCCCHHHHHHHHHHHHHH
DREAQAEGRPRIFDIDFIAEHTHGFEKFEKFCDRLEWPALETKSGLRREGMEAAAAVYAR
CCHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ARAVIGIYGMGLTQHRRGTETVQMFVNLLLLRGNIGRPGAGICPVRGHSNVQGQRTVGIA
HHHHEEEECCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
DEPSLVPLDKLKAMYGFEPPREKGMNTVETCEGVLSGKVKAFVGLGGNFIRAVPDTKRME
CCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHH
EAWRSLRLTVQVSTKLNRSHLVHGEVAYILPCLGRIEVDEQASGPQAVSMEDSTSCFHGS
HHHHHEEEEEEEECCCCCHHEECCHHHHHHHCCCCEEECCCCCCCCEECCCCCCCHHCCC
RGVARPVSDHVRSEPWIVAQLAKATLPANPKVDWNAWVGDYAQVRDAIEATYPEKFKNFN
CCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHCCC
ARLFEPGGQHKPIAARERKWETPTGKANFIVPPDGLDMDPDMKSDRRDVLDLITLRSNDQ
CEEECCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
FNTTIYGYHDRFRGVKGTRQVLFMNENDIERLQLADGETVDVVTEAADEFAREVKGLRIV
CCCEEEEEHHHHCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEE
KYDIPAGNCAGYYPELNVLIPLWHHDAQAKVPAAKAIPVRIAKAATLAVRD
EEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
PDEKIEAYTDPAGGWGSARSLIDILTREEIPASGAAMLMKQNKPGGFMCVSCAWSKPAK
CCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCC
PSTFEYCENGAKATAWEQTRKRIGPDFFERHSVTELLTWPDYDLEEKGRLTHPLRYDPQR
CCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DRYVSVSWEEAFAEIGRELKALRETDPTSAVFYSSGRASLETSYMYALFARMYGNNNLPD
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
SSNMCHESTSKALPQSIGVPVGTTVLEDFETTDLILFFGQNVGSNSPRMLHPLQDARRRG
CCCHHHHHHHHHCHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCEECCHHHHHHCC
VPIITFNPLRERGLERFTNPQSPVEMLTHSSTQISTQYHQVKAGGDIAALGGICKALFAM
CCEEEECHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHEEECCCCHHHHHHHHHHHHHH
DREAQAEGRPRIFDIDFIAEHTHGFEKFEKFCDRLEWPALETKSGLRREGMEAAAAVYAR
CCHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ARAVIGIYGMGLTQHRRGTETVQMFVNLLLLRGNIGRPGAGICPVRGHSNVQGQRTVGIA
HHHHEEEECCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
DEPSLVPLDKLKAMYGFEPPREKGMNTVETCEGVLSGKVKAFVGLGGNFIRAVPDTKRME
CCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHH
EAWRSLRLTVQVSTKLNRSHLVHGEVAYILPCLGRIEVDEQASGPQAVSMEDSTSCFHGS
HHHHHEEEEEEEECCCCCHHEECCHHHHHHHCCCCEEECCCCCCCCEECCCCCCCHHCCC
RGVARPVSDHVRSEPWIVAQLAKATLPANPKVDWNAWVGDYAQVRDAIEATYPEKFKNFN
CCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHCCC
ARLFEPGGQHKPIAARERKWETPTGKANFIVPPDGLDMDPDMKSDRRDVLDLITLRSNDQ
CEEECCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
FNTTIYGYHDRFRGVKGTRQVLFMNENDIERLQLADGETVDVVTEAADEFAREVKGLRIV
CCCEEEEEHHHHCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEE
KYDIPAGNCAGYYPELNVLIPLWHHDAQAKVPAAKAIPVRIAKAATLAVRD
EEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]