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The map label for this gene is xynB [H]

Identifier: 218531109

GI number: 218531109

Start: 3336223

End: 3337251

Strand: Reverse

Name: xynB [H]

Synonym: Mchl_3159

Alternate gene names: 218531109

Gene position: 3337251-3336223 (Counterclockwise)

Preceding gene: 218531110

Following gene: 218531108

Centisome position: 57.76

GC content: 72.4

Gene sequence:

>1029_bases
ATGACGTTGCACCGGCGAGCCCTGCTCGCGGGGACGGCGGCGGTGCTGACCGGGGCCGAGGCGCGGGCGCAGGGGGCGGA
CGTACCCCCGGCCGTGCGTCTTCCGGTGCGTCCGCAGACCGGTGAGGTTGTCCAGCCCCTACCGAAATCCGCGCCCGGCT
CCGACCTCGAAATCATCGATCTGTGGCCGGACCTGCCGCCGGGCGGCGGCGGGCCGTTCCGGTCGGAATACCGGTTCGAC
GAGACCCTGACCGGCGTCATCACCGGCGTGGTGCGGCCCTGTCTTCTCGTGATCCGCCCCCAGCGCCCGAACGGAGCCGG
GATCGTGATCGCGGCGGGCGGCGGTTATCTGCGCATCGACATCGGCAACGAGGGCCTGCCGGTCGGGCAATGGCTGGCCC
GCGCCGGCATCACCGCCTTCGTGCTGGTCTACCGTCTGCCGAGCGAGGAGTGGCGCGACGGCCCCGACGCGCCGCGCCAG
GACGCGCAACGGGCCATGCGCCTCGTGCGCTGGCGGGCGGAGGAATACGGCCTCGATCCCGACCGGATCGGCGTGCTCGG
CTTCTCCGCGGGCGGCCACCTGATGGGCGTGACCGCGACCGATGCCGAGCAGGATCTCTACGACGACACCGACGAGGCGG
ACGGTCTGAGCGCCCGCCCCTCCTTCGCCGGGCTGATCTATCCGATCGTCACGATGCGGGCGCCGTTCGACCGGACCATG
TCGAGTCGCCGGGTGCTCGTCGGCGACGACCCGCCCGATGCGCGGCGACGGGCCTATTCGGTGGAGGTGCAGGTCAACGA
GCGCACGCCGCCGGTCTTCATGGTCCAGGCCTCCGACGACCGGATCGCGGTGACCGACCATCCGCTCCTGATGTACGCGG
CGCTGCGGGCGGCGAAGGTGCCCGCCGAGATGCATCTGTTCGAGCGCGGCGGCCACGGCTTCGGGCTCGGCGTGCCGGGC
AGTCCCGCGGCAGCCTGGCCCGCCCTGTTCATGGCCTGGATGCGCGGCCATGGCCTGCTGAAGTCGTAG

Upstream 100 bases:

>100_bases
TTCACCGGGACCGCGCGGGGGACAGGCCGGGGCAGCCGCCACGGACGAGATTCCTGCGCATTGCCGCGGCGGGAGTTTCG
ATGACGGCGAGGCCGAGACC

Downstream 100 bases:

>100_bases
CCCTCGGCTGCAATCGCTCCCATGCGGAAACCGATCGGCCACGGTGCGAAAGCTCTCTCGCGGGCGCGTCTCGTGCCGCG
AACGATTGCCGATCCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylanase B; 1,4-beta-D-xylan xylanohydrolase B [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTLHRRALLAGTAAVLTGAEARAQGADVPPAVRLPVRPQTGEVVQPLPKSAPGSDLEIIDLWPDLPPGGGGPFRSEYRFD
ETLTGVITGVVRPCLLVIRPQRPNGAGIVIAAGGGYLRIDIGNEGLPVGQWLARAGITAFVLVYRLPSEEWRDGPDAPRQ
DAQRAMRLVRWRAEEYGLDPDRIGVLGFSAGGHLMGVTATDAEQDLYDDTDEADGLSARPSFAGLIYPIVTMRAPFDRTM
SSRRVLVGDDPPDARRRAYSVEVQVNERTPPVFMVQASDDRIAVTDHPLLMYAALRAAKVPAEMHLFERGGHGFGLGVPG
SPAAAWPALFMAWMRGHGLLKS

Sequences:

>Translated_342_residues
MTLHRRALLAGTAAVLTGAEARAQGADVPPAVRLPVRPQTGEVVQPLPKSAPGSDLEIIDLWPDLPPGGGGPFRSEYRFD
ETLTGVITGVVRPCLLVIRPQRPNGAGIVIAAGGGYLRIDIGNEGLPVGQWLARAGITAFVLVYRLPSEEWRDGPDAPRQ
DAQRAMRLVRWRAEEYGLDPDRIGVLGFSAGGHLMGVTATDAEQDLYDDTDEADGLSARPSFAGLIYPIVTMRAPFDRTM
SSRRVLVGDDPPDARRRAYSVEVQVNERTPPVFMVQASDDRIAVTDHPLLMYAALRAAKVPAEMHLFERGGHGFGLGVPG
SPAAAWPALFMAWMRGHGLLKS
>Mature_341_residues
TLHRRALLAGTAAVLTGAEARAQGADVPPAVRLPVRPQTGEVVQPLPKSAPGSDLEIIDLWPDLPPGGGGPFRSEYRFDE
TLTGVITGVVRPCLLVIRPQRPNGAGIVIAAGGGYLRIDIGNEGLPVGQWLARAGITAFVLVYRLPSEEWRDGPDAPRQD
AQRAMRLVRWRAEEYGLDPDRIGVLGFSAGGHLMGVTATDAEQDLYDDTDEADGLSARPSFAGLIYPIVTMRAPFDRTMS
SRRVLVGDDPPDARRRAYSVEVQVNERTPPVFMVQASDDRIAVTDHPLLMYAALRAAKVPAEMHLFERGGHGFGLGVPGS
PAAAWPALFMAWMRGHGLLKS

Specific function: B.fibrisolvens is located in the rumen of ruminant animals, where it contributes to the animal's digestion of plant material by hydrolyzing hemicellulose with its xylanases [H]

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013094
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07859 Abhydrolase_3; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 36864; Mature: 36732

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHRRALLAGTAAVLTGAEARAQGADVPPAVRLPVRPQTGEVVQPLPKSAPGSDLEIID
CCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCEEEEE
LWPDLPPGGGGPFRSEYRFDETLTGVITGVVRPCLLVIRPQRPNGAGIVIAAGGGYLRID
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCEEEEE
IGNEGLPVGQWLARAGITAFVLVYRLPSEEWRDGPDAPRQDAQRAMRLVRWRAEEYGLDP
ECCCCCCHHHHHHHHCHHEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
DRIGVLGFSAGGHLMGVTATDAEQDLYDDTDEADGLSARPSFAGLIYPIVTMRAPFDRTM
HHEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
SSRRVLVGDDPPDARRRAYSVEVQVNERTPPVFMVQASDDRIAVTDHPLLMYAALRAAKV
CCCEEEECCCCCHHHHEEEEEEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHCC
PAEMHLFERGGHGFGLGVPGSPAAAWPALFMAWMRGHGLLKS
CHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLHRRALLAGTAAVLTGAEARAQGADVPPAVRLPVRPQTGEVVQPLPKSAPGSDLEIID
CCCHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCEEEEE
LWPDLPPGGGGPFRSEYRFDETLTGVITGVVRPCLLVIRPQRPNGAGIVIAAGGGYLRID
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCEEEEE
IGNEGLPVGQWLARAGITAFVLVYRLPSEEWRDGPDAPRQDAQRAMRLVRWRAEEYGLDP
ECCCCCCHHHHHHHHCHHEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
DRIGVLGFSAGGHLMGVTATDAEQDLYDDTDEADGLSARPSFAGLIYPIVTMRAPFDRTM
HHEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
SSRRVLVGDDPPDARRRAYSVEVQVNERTPPVFMVQASDDRIAVTDHPLLMYAALRAAKV
CCCEEEECCCCCHHHHEEEEEEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHCC
PAEMHLFERGGHGFGLGVPGSPAAAWPALFMAWMRGHGLLKS
CHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909424 [H]