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The map label for this gene is yvrB [H]

Identifier: 218531102

GI number: 218531102

Start: 3330538

End: 3331578

Strand: Reverse

Name: yvrB [H]

Synonym: Mchl_3152

Alternate gene names: 218531102

Gene position: 3331578-3330538 (Counterclockwise)

Preceding gene: 218531103

Following gene: 218531101

Centisome position: 57.66

GC content: 73.39

Gene sequence:

>1041_bases
GTGAACGCCCCTCTTCTCCGCACCGAGCGCCCGACGCGGCGGTTCCGCCCAGCGCGCCCGGCCCCACTCACGCTTGCCCT
CGCGCTCGCCTCGGTGGTCCTCACGCTCGCCTCGGTGGCGGTCGGCTACGCACCCTTCGATCTCGTCGCGGCGGTGGGCG
ACCGGATCGCCGGCCGGGAGACCCTGGCTGCTTTGGTGTTGTGGGAGCTGCGACTTCCCCGCGCCCTGCTCGGCGGGCTC
GTCGGCTTCAGCCTCGGCCTGACCGGGGCGGTGATGCAGGGGTTCCTGCGCAATCCGCTGGCGGATCCCGGCATCCTCGG
CATCTCCTCGGCGGCGGCCCTCGGCGCGGTGATCGTGTTCTATGGCGGCCTTGCCGGCAGCGTGGGCCTCGCCCTGCCCC
TCGGCGGCATTGCCGGGGCGGCCTGCGCCGCGCTTCTTTTGATCGGCCTCGCCGCCCGCGGCAGCGGTACGCTCGGCCTG
ATCCTCGCGGGCGTCGGGCTTTCCAGCTTCGCGGGCGCGCTCACCGCGCTCGCCCTCAACCTGTCGCCCAACCCCTATGC
GGCCCTGGAGATCGTGTTCTGGCTGATGGGATCGCTGGCCGACCGCAGCCTCGATCACGTCCTGCTCTGCCTGCCGCTGA
TGGCTTTGGGCTGGGCTCTGATGCTCTCGACGGCCGCCGCGCTCGACGCCCTGGCGCTCGGTGAGGACACGGCCGCAAGC
CTCGGTTTCGATCTCACCTCCGTCCGATTGCGGATGATCGCGGGGGCGGCGCTCGCCGTCGGCAGCGGTGTCGCGGTGAG
CGGCGCCATCGGTTTCGTCGGGCTCGTGGTCCCGCACTTCGTGCGGCCGTGGGTCGGCGGCCGGCCGGGGGCGAGCCTGT
GGCCGAGCGGCTTCGCCGGAGCCGTGCTGGTGCTCGCGGCCGATCTCTGCGTCCGGCTGCTCGCCACCCGGCCCGAACTC
AAGCTCGGCGTCGTCACCGCCCTCGTCGGCGCGCCGTTCCTGGTCGTCCTGCTGCTGCGGAACCGGGGGCGGCCCGCATG
A

Upstream 100 bases:

>100_bases
TCGTCTCGATCCCGAACCGGTTGTGGACCTGCCCCGGCCCGCAGGTCGCCGAGGTGGTGGCACGCCTCGCCGAGGCGGCC
CGGCAGAGGGCGGAGTGGCC

Downstream 100 bases:

>100_bases
GCCTGTGCGCCCACGCCGTCGATGTCGCTGTCGATAGTCGCGCCCTCCTGTCCGGCGTCGGCCTCGCGCTCGAACCCAGC
CGCCTCGTCGGCCTCGTCGG

Product: transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNAPLLRTERPTRRFRPARPAPLTLALALASVVLTLASVAVGYAPFDLVAAVGDRIAGRETLAALVLWELRLPRALLGGL
VGFSLGLTGAVMQGFLRNPLADPGILGISSAAALGAVIVFYGGLAGSVGLALPLGGIAGAACAALLLIGLAARGSGTLGL
ILAGVGLSSFAGALTALALNLSPNPYAALEIVFWLMGSLADRSLDHVLLCLPLMALGWALMLSTAAALDALALGEDTAAS
LGFDLTSVRLRMIAGAALAVGSGVAVSGAIGFVGLVVPHFVRPWVGGRPGASLWPSGFAGAVLVLAADLCVRLLATRPEL
KLGVVTALVGAPFLVVLLLRNRGRPA

Sequences:

>Translated_346_residues
MNAPLLRTERPTRRFRPARPAPLTLALALASVVLTLASVAVGYAPFDLVAAVGDRIAGRETLAALVLWELRLPRALLGGL
VGFSLGLTGAVMQGFLRNPLADPGILGISSAAALGAVIVFYGGLAGSVGLALPLGGIAGAACAALLLIGLAARGSGTLGL
ILAGVGLSSFAGALTALALNLSPNPYAALEIVFWLMGSLADRSLDHVLLCLPLMALGWALMLSTAAALDALALGEDTAAS
LGFDLTSVRLRMIAGAALAVGSGVAVSGAIGFVGLVVPHFVRPWVGGRPGASLWPSGFAGAVLVLAADLCVRLLATRPEL
KLGVVTALVGAPFLVVLLLRNRGRPA
>Mature_346_residues
MNAPLLRTERPTRRFRPARPAPLTLALALASVVLTLASVAVGYAPFDLVAAVGDRIAGRETLAALVLWELRLPRALLGGL
VGFSLGLTGAVMQGFLRNPLADPGILGISSAAALGAVIVFYGGLAGSVGLALPLGGIAGAACAALLLIGLAARGSGTLGL
ILAGVGLSSFAGALTALALNLSPNPYAALEIVFWLMGSLADRSLDHVLLCLPLMALGWALMLSTAAALDALALGEDTAAS
LGFDLTSVRLRMIAGAALAVGSGVAVSGAIGFVGLVVPHFVRPWVGGRPGASLWPSGFAGAVLVLAADLCVRLLATRPEL
KLGVVTALVGAPFLVVLLLRNRGRPA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=309, Percent_Identity=40.1294498381877, Blast_Score=141, Evalue=8e-35,
Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=38.8489208633094, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=36.013986013986, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1786805, Length=285, Percent_Identity=38.2456140350877, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1786347, Length=274, Percent_Identity=29.1970802919708, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1786804, Length=289, Percent_Identity=33.5640138408304, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34816; Mature: 34816

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPLLRTERPTRRFRPARPAPLTLALALASVVLTLASVAVGYAPFDLVAAVGDRIAGRE
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
TLAALVLWELRLPRALLGGLVGFSLGLTGAVMQGFLRNPLADPGILGISSAAALGAVIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
YGGLAGSVGLALPLGGIAGAACAALLLIGLAARGSGTLGLILAGVGLSSFAGALTALALN
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHEE
LSPNPYAALEIVFWLMGSLADRSLDHVLLCLPLMALGWALMLSTAAALDALALGEDTAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LGFDLTSVRLRMIAGAALAVGSGVAVSGAIGFVGLVVPHFVRPWVGGRPGASLWPSGFAG
HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
AVLVLAADLCVRLLATRPELKLGVVTALVGAPFLVVLLLRNRGRPA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNAPLLRTERPTRRFRPARPAPLTLALALASVVLTLASVAVGYAPFDLVAAVGDRIAGRE
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
TLAALVLWELRLPRALLGGLVGFSLGLTGAVMQGFLRNPLADPGILGISSAAALGAVIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
YGGLAGSVGLALPLGGIAGAACAALLLIGLAARGSGTLGLILAGVGLSSFAGALTALALN
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHEE
LSPNPYAALEIVFWLMGSLADRSLDHVLLCLPLMALGWALMLSTAAALDALALGEDTAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LGFDLTSVRLRMIAGAALAVGSGVAVSGAIGFVGLVVPHFVRPWVGGRPGASLWPSGFAG
HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
AVLVLAADLCVRLLATRPELKLGVVTALVGAPFLVVLLLRNRGRPA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]