| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218531094
Identifier: 218531094
GI number: 218531094
Start: 3319982
End: 3321880
Strand: Reverse
Name: 218531094
Synonym: Mchl_3144
Alternate gene names: NA
Gene position: 3321880-3319982 (Counterclockwise)
Preceding gene: 218531100
Following gene: 218531092
Centisome position: 57.49
GC content: 73.51
Gene sequence:
>1899_bases ATGTCGCTGCGCCGCACCCTTTCCGCCCTCGCACTTGGACTCGTCGCTGCGGGGTTGGTGGCTGCCTGCCTGCCGTGGTC GATCGAGGCGCCCGGCACCACCCGCTTCGTCAGCCGGGGCTTGCAGCAGGGCTGGGGCGTGGCGCTGGCAGCCCGGGGAC GCACGGAGGTCGTGCTGCTCCCCCTCCCCCGGATCGTGTTCGAGGATATCCGCCTGACCGAGGGCGATGCCGCCGGGCCG GTGCTGGCCGCGGGCGGGAACCTGTCGCTTCAGCTCGGCCTCGCTGCGCTGCTCACCGGCCGGGTCGAGGTCGATTCCCT GACGCTCGACGGGTCGGAGCTGGTGCTGCCGCAGGAGGCGGGGGATCCCCGATGGTCCGCGGCGGCCGAGCGCCTGACCC ACAGCATCGCCGGCGCGGACGGTGACCGGCCCCGGCGGATCATTCTCGCCCGCTGCGCGCTCAAGGGCCGCGACCCGCGG GACGGGACGCTGCAGACGGCCCGCGACGTCGATCTCACGATCTCCTGGCCGGCCTGGAGCGAGAGCCTCGCCGTGAACGG GGGATTTCGCTGGAGCGACGGCAGCGCCCGCATCACGCTGACGGATCTGCGGCCCTACGCGCTTTTCTCCGGGGGTGAGA GCCCGTTTACCGCCGCCCTGACATGGCCGACGGGTTCCCTGAACGCCCAGGGCAATGGCAGCCTGCGCGACGGCCTCAAG GCCTCGGGCACCGGCAGCCTCCAGACCCGATCCCTGCACAAGACGCTGGCCCTGACCGGCGGGGGGCTCGCCCTGTCGCC CTTCGTCGAGGATTTCGCCGTGGGGGGCAGCTTCGAGGCGGCCGCCGGTCAGATCCAGTTTCCGAACGTCACCGTGCGCA GCGACGGGAACGTGCTCGAGGGGGCAGGCTCGGCCACCTTCGGCCCGAAGCGCAACGCGGTGCAGGCCACGCTCGCGGCC GAAAACCTCAACCTCTCACCGCTGCTCGCCGGGCTCCTGCGCCTGACGGGCTTCGATCGTGCCGCCGACGACGCGGCCAG GCACAGCCGGTCCCTCGACCTGCGTCCCTTCACCGGGGGCGACCTCGATCTGCGGATCTCTGCTGGCAATGCCCGGATCG GGCCGGTGCAACTGACGGATCTCGCGTCCAGCGTTCTCGTGCGCGAGGACGGCATCGAAGCGTCGCTCGGCCGTGCCAAC GTGCGGGGCGGTATGGTCAAGGGCCGGGTCTCCCTCGCCGCCGACAGGGGCGAAGCGGCCCCCACCCGCGTGAAGGCACA GGGCAGTTTCGACGGGCTCGATCTCGGAGCCCTGCTGGACGATCTCGGCCAGTCCCGCTGGGTGCTCGGGGCGACCCGGG GCTCTCTCGCGCTGGAGGGAGCCGGCCACGATGTCGATGCCCTGGCCCGTTCCGTATCGGGCCGGGTCGCGCTGGAGAGC GCGGACGGTGCCCTGTCCGGGCTCGACCTCGCCGACGTGGTCCATCGCGGCGGCGCCGTGGCGCCGGGGGCGTTGGCCCG GCGCAACGGCCGGACGCCGTTCGAGCATGCGGCCGTGACCCTGTTGTTCGCCGATGGCATCGGCGAGATCGTCGAGGGCC GGCTCGCCTCCCGCACCCTCGGCGCGTCCCTGAACGGGCGCGTCGCCTTGGCCGACCGCCGCTTCCAGGCGCGGGCCGAG ATCCTGCCGCGGGCAACCGCCTCCGCCGACGGGGCGTCGCCCCCCGCCACGCTGTTCGAAATCGCCGGTCCCTGGGATGC CGTGAGCGTTCGGGCCAGCGCCGGGCCGCGTCCCGCCGGAGACGAGGCACGCCAGCGTGCCGCCCCCGATTCCTTCCAGC GGCCCGGCGCCGATCTGCCCCTCGGCATCCGCGCCTACGTGCCGGCGACGGGGCCCTGA
Upstream 100 bases:
>100_bases GGACAGGAGAACGGGAAACGGCTAAGGAGTCGGATCGCACGGCTCGCCACGCCGACGCGGTTCGGCCGAACCGATCCGCG TCGCCCGCCCACGGAGTGCA
Downstream 100 bases:
>100_bases CGTCCGGACCGCTGAGGTCCGGGTGTCAGGGAGACGATCTCAGGAGTTGCCGCTGGCCGCGCCGGCCGTGGATGTGCTGC CGGAGCCGTTGCCGCCCTTG
Product: AsmA family protein
Products: NA
Alternate protein names: AsmA Protein Assembly Of Outer Membrane Proteins; Assembly Of Outer Membrane Protein
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MSLRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLLPLPRIVFEDIRLTEGDAAGP VLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGDPRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPR DGTLQTARDVDLTISWPAWSESLAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLK ASGTGSLQTRSLHKTLALTGGGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRSDGNVLEGAGSATFGPKRNAVQATLAA ENLNLSPLLAGLLRLTGFDRAADDAARHSRSLDLRPFTGGDLDLRISAGNARIGPVQLTDLASSVLVREDGIEASLGRAN VRGGMVKGRVSLAADRGEAAPTRVKAQGSFDGLDLGALLDDLGQSRWVLGATRGSLALEGAGHDVDALARSVSGRVALES ADGALSGLDLADVVHRGGAVAPGALARRNGRTPFEHAAVTLLFADGIGEIVEGRLASRTLGASLNGRVALADRRFQARAE ILPRATASADGASPPATLFEIAGPWDAVSVRASAGPRPAGDEARQRAAPDSFQRPGADLPLGIRAYVPATGP
Sequences:
>Translated_632_residues MSLRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLLPLPRIVFEDIRLTEGDAAGP VLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGDPRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPR DGTLQTARDVDLTISWPAWSESLAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLK ASGTGSLQTRSLHKTLALTGGGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRSDGNVLEGAGSATFGPKRNAVQATLAA ENLNLSPLLAGLLRLTGFDRAADDAARHSRSLDLRPFTGGDLDLRISAGNARIGPVQLTDLASSVLVREDGIEASLGRAN VRGGMVKGRVSLAADRGEAAPTRVKAQGSFDGLDLGALLDDLGQSRWVLGATRGSLALEGAGHDVDALARSVSGRVALES ADGALSGLDLADVVHRGGAVAPGALARRNGRTPFEHAAVTLLFADGIGEIVEGRLASRTLGASLNGRVALADRRFQARAE ILPRATASADGASPPATLFEIAGPWDAVSVRASAGPRPAGDEARQRAAPDSFQRPGADLPLGIRAYVPATGP >Mature_631_residues SLRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLLPLPRIVFEDIRLTEGDAAGPV LAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGDPRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRD GTLQTARDVDLTISWPAWSESLAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKA SGTGSLQTRSLHKTLALTGGGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRSDGNVLEGAGSATFGPKRNAVQATLAAE NLNLSPLLAGLLRLTGFDRAADDAARHSRSLDLRPFTGGDLDLRISAGNARIGPVQLTDLASSVLVREDGIEASLGRANV RGGMVKGRVSLAADRGEAAPTRVKAQGSFDGLDLGALLDDLGQSRWVLGATRGSLALEGAGHDVDALARSVSGRVALESA DGALSGLDLADVVHRGGAVAPGALARRNGRTPFEHAAVTLLFADGIGEIVEGRLASRTLGASLNGRVALADRRFQARAEI LPRATASADGASPPATLFEIAGPWDAVSVRASAGPRPAGDEARQRAAPDSFQRPGADLPLGIRAYVPATGP
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65113; Mature: 64982
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEE PLPRIVFEDIRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEA CCCHHHHHHCEECCCCCCCCEEEECCCEEEEECHHHHHCCCEEEEEEEECCCEEEECCCC GDPRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWS CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCCCEECCCEEEEEECCCCC ESLAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLK CCEEECCCEEECCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCHHCCCC ASGTGSLQTRSLHKTLALTGGGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRSDGNVLE CCCCCCCCHHHHHHEEEEECCCEEEHHHHHHHHCCCCCCCCCCEEECCEEEEECCCCEEE GAGSATFGPKRNAVQATLAAENLNLSPLLAGLLRLTGFDRAADDAARHSRSLDLRPFTGG CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC DLDLRISAGNARIGPVQLTDLASSVLVREDGIEASLGRANVRGGMVKGRVSLAADRGEAA CEEEEEECCCCEECCEEHHHHHHHHEEECCCCCCCCCCCCCCCCEEECEEEEEECCCCCC PTRVKAQGSFDGLDLGALLDDLGQSRWVLGATRGSLALEGAGHDVDALARSVSGRVALES CCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCHHHHHHHHCCCEEEEC ADGALSGLDLADVVHRGGAVAPGALARRNGRTPFEHAAVTLLFADGIGEIVEGRLASRTL CCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCHHHHEEEEEEECCHHHHHHCHHHHHHH GASLNGRVALADRRFQARAEILPRATASADGASPPATLFEIAGPWDAVSVRASAGPRPAG CCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCC DEARQRAAPDSFQRPGADLPLGIRAYVPATGP HHHHHHCCCCHHCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure SLRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEE PLPRIVFEDIRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEA CCCHHHHHHCEECCCCCCCCEEEECCCEEEEECHHHHHCCCEEEEEEEECCCEEEECCCC GDPRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWS CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCCCEECCCEEEEEECCCCC ESLAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLK CCEEECCCEEECCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCHHCCCC ASGTGSLQTRSLHKTLALTGGGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRSDGNVLE CCCCCCCCHHHHHHEEEEECCCEEEHHHHHHHHCCCCCCCCCCEEECCEEEEECCCCEEE GAGSATFGPKRNAVQATLAAENLNLSPLLAGLLRLTGFDRAADDAARHSRSLDLRPFTGG CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC DLDLRISAGNARIGPVQLTDLASSVLVREDGIEASLGRANVRGGMVKGRVSLAADRGEAA CEEEEEECCCCEECCEEHHHHHHHHEEECCCCCCCCCCCCCCCCEEECEEEEEECCCCCC PTRVKAQGSFDGLDLGALLDDLGQSRWVLGATRGSLALEGAGHDVDALARSVSGRVALES CCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCHHHHHHHHCCCEEEEC ADGALSGLDLADVVHRGGAVAPGALARRNGRTPFEHAAVTLLFADGIGEIVEGRLASRTL CCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCHHHHEEEEEEECCHHHHHHCHHHHHHH GASLNGRVALADRRFQARAEILPRATASADGASPPATLFEIAGPWDAVSVRASAGPRPAG CCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCC DEARQRAAPDSFQRPGADLPLGIRAYVPATGP HHHHHHCCCCHHCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA