Definition Cyanothece sp. PCC 7424 chromosome, complete genome.
Accession NC_011729
Length 5,942,652

Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 218437736

GI number:

Start: 821647

End: 824937

Strand: Direct

Name: rpoB

Synonym: PCC7424_0741

Alternate gene names: NA

Gene position: NA

Preceding gene: 218437735

Following gene: 218437737

Centisome position: NA

GC content: NA

Gene sequence:

>3291_bases
ATGAGTAACCTAACTTACAACCTTCTTCCGGATTTAATCTCAATTCAACGCTCTAGTTTTCGTTGGTTTCTCCAAGAAGG
ATTAATTGAAGAACTCGATAGCTTTTCTCCGATTACAGACTACACCGGAAAATTAGAACTTCACTTTTTAGGACAAGATT
ATAAACTTAAAGAACCCAAATATACAGTTGATGAAGCTAAACGACGGGATAGCACCTATTCCGTTCAAATGTATGTGCCG
ACTCGTTTAATTAACAAAGAAACGGGAAATATTAAAGAGCAAGAGGTCTTCATCGGGGATTTACCCTTGATGACAGAACG
GGGAACATTTATTATCAATGGAGCAGAGCGAGTCATCGTTAATCAAATTGTCCGCTCACCCGGAGTTTATTATAAGTGTG
AATATGATAAAAATGGTCGTCGCACTTATTCAGCCTCTTTGATTCCTAACCGAGGAGCATGGTTAAAATTTGAAACCGAT
AAAAACGGTTTAGTTTGGGTCAGAATTGATAAAACCCGCAAATTATCCGCCCAAGTTCTCCTCAAAGCGATCGGGTTATC
CGATAATGAAATTCTTGATGCTCTACGTCATCCGGATTTCTATCAAAAAACTTTAGATAAAGAAGGCAATCCCTCAGAAG
AAGAGGCACTCTTAGAACTATACCGCAAACTACGACCCGGTGAACCCCCAACAGTAAGCGGGGGACAATTATTGTTAGAA
TCGCGCTTTTTTGATAACAAACGGTATGATTTGGGACGAGTAGGGCGCTATAAGCTCAATAAAAAATTGCGCTTGAATGT
GACGGATACCACCAGAGTGTTAACCAGTGAGGATATTTTATCGGCGATCGATTATTTAATCAATTTGGAATTTGACATCG
GTAGCACGGATGATATTGACCATTTGGGAAATCGCCGGGTGCGCTCGGTGGGAGAATTGCTACAAAACCAGGTGAGAGTA
GGTCTAAATCGCTTAGAAAGAATTATTCGGGAGCGGATGACAGTCAGTGAGGCCGATAGTTTAACGCCGGCTTCGTTGGT
GAATCCTAAGCCTCTGGTAGCAGCGATTAAAGAGTTTTTTGGGTCTTCCCAATTATCTCAGTTTATGGATCAGACAAATC
CCTTGGCAGAGTTGACCCATAAACGCCGGTTATCGGCTTTAGGGCCAGGCGGGTTGACGCGAGAAAGAGCCGGGTTTGCG
GTGCGGGATATTCACCCCTCTCATCATGGACGGATTTGTCCGGTAGAAACCCCTGAAGGGCCCAATGCGGGGTTAATTGG
TTCGTTGGCGACTTATGCGCGAGTGAATCAGTATGGATTTATTGAAACCCCTTATTATCGGGTAGAAAATGGCCGAGCGC
GTCGAGATTTAGAACCGGTTTATTTGACGGCGGATGAGGAAGATGAATTTCGGGTAGCTCCGGGAGATGTGGCGACGGAT
GAAGAAGGCCATATTATCGGGGAGTCGGTGCCGGTTCGCTATCGTCACGAATTTTCGACAACAGAACCCCAACAGGTAGA
TTATATTGCGGTTTCGCCGGTGCAGATTGTCTCAGTAGCCACCTCTTTGATTCCGTTCTTGGAACATGATGATGCTAACC
GGGCACTGATGGGGTCGAATATGCAGCGTCAGGCAGTTCCTCTGTTGCGTCCGGAGCGGCCTTTAGTAGGAACGGGACTG
GAGGCGCAAACGGCGCGAGATTCGGGGATGGTGATTGTTTCCCGGACTCATGGGATTGTCACTCATGTGGATGCGACGAC
GATTCGGGTTCAAGTTAAGGGTGAGGAGCGAGTGATTGAGTATGAGTTACAGAAATATCAACGCTCGAACCAAGATACTT
GTTTAAATCAGCGGCCTTTGGTCTATACCGGAGAAGAAGTTGTTCCCGGTCAGGTGTTGGCAGATGGGTCAGCCACCGAA
GGGGGAGAAATCGCCCTAGGACAGAATATTTTGGTGGCTTATATGCCTTGGGAAGGCTATAACTATGAGGACGCGATTTT
GATCAGTGAACGGCTGGTCTATGATGATGTTTATACGAGTATCCACGTAGAAAAGTATGAAATAGAAGCCCGTCAAACCA
AGTTAGGGCCAGAGGAGATTACGCGGGAAATTCCTAATGTTGGGGAGGATGCCTTAAGAAATCTCGATGAGCGCGGAATT
ATCCGTATTGGGGCTTGGGTCGAAGCCGGTGATATTTTGGTGGGTAAAGTGACTCCCAAAGGAGAATCAGATCAACCCCC
TGAAGAAAAGCTCCTACGGGCGATTTTCGGAGAAAAAGCCAGAGATGTGAGAGATAATTCCCTGCGTGTGCCCAATGGTG
AAAAAGGACGGGTTGTGGATGTGCGGGTGTTTACCCGTGAACAGGGGGATGAATTGCCTCCTGGGGCGAATATGGTCGTT
CGTGTCTATGTAGCCCAAAAGCGGAAAATCCAAGTAGGGGATAAAATGGCGGGTCGTCACGGAAATAAGGGGATTATTTC
CCGAATTCTGCCGATTGAGGATATGCCTTATTTACCCGATGGCCGTCCAGTTGATATTGTTCTCAATCCCTTGGGTGTGC
CTTCCCGGATGAATGTGGGTCAGGTGTTTGAGTGCCTTTTGGGATGGGCTGGAGAAAATTTGGGGGTACGCTTTAAAATT
ACTCCTTTTGATGAAATGTATGGAGAGGAAGCCTCCCGGGAAACCGTGCATGGACTTTTAGAGCAAGCTTCCCACCGACC
GGGTAAAGATTGGGTCTTTGATACCGAAAATCCAGGGAAAATCATGGTTTATGATGGGCGCACCGGTGAACCGTTTGATC
GACCGGTGACAGTAGGTCAGGCTTATATGTTGAAGCTGGTTCACTTGGTAGATGATAAGATTCACGCTCGTTCGACCGGC
CCCTACTCTTTGGTGACTCAGCAACCCCTCGGCGGTAAGGCTCAACAGGGGGGTCAACGATTCGGAGAGATGGAGGTATG
GGCATTAGAAGCTTATGGGGCGGCTTATACCCTTCAGGAGTTATTAACGGTTAAGTCCGATGATATGCAGGGACGTAATG
AGGCGTTAAATGCGATCGTTAAAGGTAAGCCGATTCCTCGTCCGGGTACGCCAGAGTCCTTTAAGGTATTGATGCGGGAG
TTACAGTCCTTGGGGCTGGATATTGCTGTGCATAAGGTAGAAACTCTAACGGATGGAACTTCTAGAGATGTGGAGGTAGA
TTTGATGGCGGATATGGGTCGTCGCACTCCAACCCGTCCGACTTATGAATCTCTGACGACGGAAGATCTAGAGGAAGAAG
TGAACGGTTAA

Upstream 100 bases:

>100_bases
CAGAGGCTTTAACCAGTAATGGAAAGGGATAATAAAATCAAAAATTATCCATGATCCATTATCAATTATCCATTATCTGA
CACCCTATAATATCCTTGAC

Downstream 100 bases:

>100_bases
TTTCAAGGTTAGGAGTTAGGAGTCAATGACCAGTAATTTGAGGGGAAATAATCCCCCAAATACCAAAAATTAATGACACC
TAACCCCTAACCCCTATCAA

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1096_residues
MSNLTYNLLPDLISIQRSSFRWFLQEGLIEELDSFSPITDYTGKLELHFLGQDYKLKEPKYTVDEAKRRDSTYSVQMYVP
TRLINKETGNIKEQEVFIGDLPLMTERGTFIINGAERVIVNQIVRSPGVYYKCEYDKNGRRTYSASLIPNRGAWLKFETD
KNGLVWVRIDKTRKLSAQVLLKAIGLSDNEILDALRHPDFYQKTLDKEGNPSEEEALLELYRKLRPGEPPTVSGGQLLLE
SRFFDNKRYDLGRVGRYKLNKKLRLNVTDTTRVLTSEDILSAIDYLINLEFDIGSTDDIDHLGNRRVRSVGELLQNQVRV
GLNRLERIIRERMTVSEADSLTPASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFA
VRDIHPSHHGRICPVETPEGPNAGLIGSLATYARVNQYGFIETPYYRVENGRARRDLEPVYLTADEEDEFRVAPGDVATD
EEGHIIGESVPVRYRHEFSTTEPQQVDYIAVSPVQIVSVATSLIPFLEHDDANRALMGSNMQRQAVPLLRPERPLVGTGL
EAQTARDSGMVIVSRTHGIVTHVDATTIRVQVKGEERVIEYELQKYQRSNQDTCLNQRPLVYTGEEVVPGQVLADGSATE
GGEIALGQNILVAYMPWEGYNYEDAILISERLVYDDVYTSIHVEKYEIEARQTKLGPEEITREIPNVGEDALRNLDERGI
IRIGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVDVRVFTREQGDELPPGANMVV
RVYVAQKRKIQVGDKMAGRHGNKGIISRILPIEDMPYLPDGRPVDIVLNPLGVPSRMNVGQVFECLLGWAGENLGVRFKI
TPFDEMYGEEASRETVHGLLEQASHRPGKDWVFDTENPGKIMVYDGRTGEPFDRPVTVGQAYMLKLVHLVDDKIHARSTG
PYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPRPGTPESFKVLMRE
LQSLGLDIAVHKVETLTDGTSRDVEVDLMADMGRRTPTRPTYESLTTEDLEEEVNG

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA