| Definition | Bacillus cereus B4264, complete genome. |
|---|---|
| Accession | NC_011725 |
| Length | 5,419,036 |
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The map label for this gene is 218236086
Identifier: 218236086
GI number: 218236086
Start: 967528
End: 968388
Strand: Direct
Name: 218236086
Synonym: BCB4264_A0982
Alternate gene names: NA
Gene position: 967528-968388 (Clockwise)
Preceding gene: 218234699
Following gene: 218235480
Centisome position: 17.85
GC content: 46.46
Gene sequence:
>861_bases ATGGCGGTGTATCGTAATGTGCAGGTGAATTTTTGGCAGGATGATTTTGTTTTGGATTTGACGCCGGAGGAGCGGTATTT TTATGTGTATTTGTTAACTTGTTCGAAGACGACGCAGTGCGGGATTTTTCCTTTTCCGAAGCGGTTAGCTGAGATGGAGA CGGGTTATAATCGGGAGACTGTTGATAAGCTTGTGCAGCGCTTCATTGATTATGGGAAGATTCTTTATGATGCGGATACG CGGGAGTTATTCGTTTTAAATTGGCTTCGTTATAATCCTGTGACGAATACGAATGTGGAGAAGTGTGTGCTTCGTGAGCT TAAGGGTGTGAAGAATAAGGAGTTTGTACATATGTTTCTTCAGAAGTGCACTGAGGAAGAGCTGAATGTTCCGATGCTTT TAGCGCATTTCGGTATGCCTGATGATTTGGCTGTGGATGATGTTGAGCCGATTTGTGAGGAGACAGAGGAAGAAGAGGTT GTAGAGGAAGAAACGGGAAGTCGTGTGTTTTCTTTTTATGAGCAACATTTCGGTAGTTTGTCCCCTCATGCGGTAGAGGA ACTGAGTGCGTGGATGGAAGATTTGTCTGAGGATCTTGTGCTGAAGGCTCTTCAAATTGCGTTTGAGAATAATAAGCGGA CGGTTGCTTATGTGAAGGGCATTTTGAGAGGCTGGCACGGGAAAGGGTTTACGAAAGTGTGTGAGGTTGAGGCGGATACG GCTAAGTTTAGGAAGAAGGATTCGTCTGTTAGTACCGGGGAGACGGAGGAGTTTTTGGCGAGGTGTGAGGAGTGGGAGAA GAATGCGCCATCTGAGGAAGAGTTGCAGCGCTTTTTAGCGGAGCGCGGGTGGCGTCCATGA
Upstream 100 bases:
>100_bases AGTCAAAAAAAATTTAAAATAACACGCCAAAAACCCGGCCAGTCTCCCATATATATTATGAAGGGGCTTTTAATTTTGAA CGGAGACGGGAGGAATTGGG
Downstream 100 bases:
>100_bases GTATTCAAAATGTGGAGGCGGAAAAGACGGTGTTAGGTTCTCTACTACTTGATGGAGAGCTTATTAAGGAGTGCCGTTTG ACGGAGCAGTATTTTTCTAT
Product: DnaD domain protein
Products: NA
Alternate protein names: DNAD Domain Protein; Phage Protein; Primosome DNAD Subunit; DNAA Analog DnaD Domain Protein; DNAD Protein; DNAA Domain-Containing Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAVYRNVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRETVDKLVQRFIDYGKILYDADT RELFVLNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFLQKCTEEELNVPMLLAHFGMPDDLAVDDVEPICEETEEEEV VEEETGSRVFSFYEQHFGSLSPHAVEELSAWMEDLSEDLVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVCEVEADT AKFRKKDSSVSTGETEEFLARCEEWEKNAPSEEELQRFLAERGWRP
Sequences:
>Translated_286_residues MAVYRNVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRETVDKLVQRFIDYGKILYDADT RELFVLNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFLQKCTEEELNVPMLLAHFGMPDDLAVDDVEPICEETEEEEV VEEETGSRVFSFYEQHFGSLSPHAVEELSAWMEDLSEDLVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVCEVEADT AKFRKKDSSVSTGETEEFLARCEEWEKNAPSEEELQRFLAERGWRP >Mature_285_residues AVYRNVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRETVDKLVQRFIDYGKILYDADTR ELFVLNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFLQKCTEEELNVPMLLAHFGMPDDLAVDDVEPICEETEEEEVV EEETGSRVFSFYEQHFGSLSPHAVEELSAWMEDLSEDLVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVCEVEADTA KFRKKDSSVSTGETEEFLARCEEWEKNAPSEEELQRFLAERGWRP
Specific function: Unknown
COG id: COG3935
COG function: function code L; Putative primosome component and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33470; Mature: 33339
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYRNVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRET CCEEEEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH VDKLVQRFIDYGKILYDADTRELFVLNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFL HHHHHHHHHHHCCEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH QKCTEEELNVPMLLAHFGMPDDLAVDDVEPICEETEEEEVVEEETGSRVFSFYEQHFGSL HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC SPHAVEELSAWMEDLSEDLVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVCEVEADT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCHHH AKFRKKDSSVSTGETEEFLARCEEWEKNAPSEEELQRFLAERGWRP HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AVYRNVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRET CEEEEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH VDKLVQRFIDYGKILYDADTRELFVLNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFL HHHHHHHHHHHCCEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH QKCTEEELNVPMLLAHFGMPDDLAVDDVEPICEETEEEEVVEEETGSRVFSFYEQHFGSL HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC SPHAVEELSAWMEDLSEDLVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVCEVEADT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCHHH AKFRKKDSSVSTGETEEFLARCEEWEKNAPSEEELQRFLAERGWRP HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA