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The map label for this gene is ykoX [H]

Identifier: 218235967

GI number: 218235967

Start: 833516

End: 834121

Strand: Direct

Name: ykoX [H]

Synonym: BCB4264_A0865

Alternate gene names: 218235967

Gene position: 833516-834121 (Clockwise)

Preceding gene: 218234029

Following gene: 218235197

Centisome position: 15.38

GC content: 35.97

Gene sequence:

>606_bases
ATGGAGCAAATTATTTTAGATATAATCGAGTTTTTAAAGCAATTTTCTTATTTTGGAGTTGTGTTAGCATTAACGTTTGA
ATTTATTCCAGCAGAAGTAGTTTTGCCCATGGTTGGTTATTGGGTGTACGAGGGAGATATGAATTTTTGGCTTGCTGTAT
TAGCCGGAACCCTCGGCGGAACGACAGGACCTTTAACGTTATATGCACTCGGTTATTACGGCGGTCGTCCTCTATTAATA
AAATACGGGAAATACTTCTTCATTAAAGAAGAACAAATTCAAAAAGCAGATGATTTCTTTGAGAAATATGGACCGGTTGT
AGCATTTGTTGGACGCTTTGTGCCAGGAGTTCGAACGCTTATTTCTGTTCCATGTGGTATGGCGAAAATGAACATATGGA
AATTTAGCATATATACATTTGTAGCAATGTTCCCGTTAACGACTTTGTATGTTTATTTTGGAATGAAATTAGGTCCACAT
TGGGAAAAAGCAGCGGATGTTGTTGGGCAATATATGTTACCGATATTAGTGGTCGTAGTTATTATTGTAGGTGGTATATT
AATCTATAAATTTATGAAAAAAAGAAACAGAACGGAATCTATCTAG

Upstream 100 bases:

>100_bases
GAATTGTATTATTTATTTTGAACCGAATTGTAAAAATGGCGCCAGTTCAATTACAAGAAAAGCATAACGTAAACGTAGGA
TAGGAGTTGGGGTAGAAAAT

Downstream 100 bases:

>100_bases
TCATTAGCACTCAGGTTAAATTTTTGAAAATAGATGAATAGTACAGGCAAAAGACTCTGAGGGACATACACATATAGGGA
ATATAAAAGAGAGAGGGGAA

Product: dedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGGTTGPLTLYALGYYGGRPLLI
KYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTLISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPH
WEKAADVVGQYMLPILVVVVIIVGGILIYKFMKKRNRTESI

Sequences:

>Translated_201_residues
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGGTTGPLTLYALGYYGGRPLLI
KYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTLISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPH
WEKAADVVGQYMLPILVVVVIIVGGILIYKFMKKRNRTESI
>Mature_201_residues
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGGTTGPLTLYALGYYGGRPLLI
KYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTLISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPH
WEKAADVVGQYMLPILVVVVIIVGGILIYKFMKKRNRTESI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22889; Mature: 22889

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCC
TTGPLTLYALGYYGGRPLLIKYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTL
CCCCHHHHEEHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPHWEKAADVVGQYMLPILVVVV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IIVGGILIYKFMKKRNRTESI
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCC
TTGPLTLYALGYYGGRPLLIKYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTL
CCCCHHHHEEHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPHWEKAADVVGQYMLPILVVVV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IIVGGILIYKFMKKRNRTESI
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]