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The map label for this gene is yibQ [H]

Identifier: 218235875

GI number: 218235875

Start: 1342806

End: 1343576

Strand: Reverse

Name: yibQ [H]

Synonym: BCB4264_A1385

Alternate gene names: 218235875

Gene position: 1343576-1342806 (Counterclockwise)

Preceding gene: 218233885

Following gene: 218231397

Centisome position: 24.79

GC content: 36.06

Gene sequence:

>771_bases
ATGCGAAAATATACGATTGCATTACTCATCATTGTTTTGTTTTTACCGTCCTTCTTATTTCCTATTCAAGCAACTGCTCA
TACGAATAAAGTTGCTATTGTCATTGATGATTTCGGAAATAATATGAAGGGGACTAATCAAATGTTATCACTTCCCATTC
CACTCACTGTTGCTGTTATGCCTTTTCTTCCTTCCACAAAAGAAGATGCAATAGCTGCCCATAAGAAAGGCCATGAAGTT
ATTATACATATGCCAATGGAACCTATAAAAGGTAAAAAAGAATGGCTTGGGCCGAAAGCAATTACAACTGATTTAAGCGA
TGAAGAAATAAACAACCGACTTGAACAAGCGATTCAAGAAGTACCGCATGCAATTGGAATGAACAATCATATGGGGTCAA
AAGTAACAGCGGATGAAAGAATTGTTCGCCTTATACTTGCTGCTTGTAAAAAACACGGTTTATTTTACTTAGATAGTAAA
ACGAATCCTAATAGTGTCGTCCCAAAAATCGGAAAAGAATTAGGAGTTCCTATTATTGAAAACCAACTATTTTTTGATGA
TGTGTATACAGCAGGACATATTTCAAAACAAGCCCAATTACTCATCAAAAAAATTCAAGAAAAACCTATTATGGTAGCTA
TCGGGCATGTGGGCCCTCCAGGTGAAATTACATCACGCGTTATTGAAACTTCTATCCCTAAAATTCGTGAGCATGCAGAC
TTTATTTTCTTATCTGATCTAGCATTATCCCCGCCTCCTGTTTCAAAATAA

Upstream 100 bases:

>100_bases
ATCGGGTAGGCAGTGAATCTCCCACCTATCCAGCCCAATGTTGAGGTGGGAGTCTTACTCCCCACAAATAGCGGGATAAC
AATAGAAAGGAAATATTTAT

Downstream 100 bases:

>100_bases
AGTTCATTACTCACATATAATCAGCCCTCACCAATTGGGCTTTTATGGGCAATCCGTCCCCCCACTTAACTTCTTTACTT
GCGCTGAATTTTGAGGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRKYTIALLIIVLFLPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLSLPIPLTVAVMPFLPSTKEDAIAAHKKGHEV
IIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSK
TNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHAD
FIFLSDLALSPPPVSK

Sequences:

>Translated_256_residues
MRKYTIALLIIVLFLPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLSLPIPLTVAVMPFLPSTKEDAIAAHKKGHEV
IIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSK
TNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHAD
FIFLSDLALSPPPVSK
>Mature_256_residues
MRKYTIALLIIVLFLPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLSLPIPLTVAVMPFLPSTKEDAIAAHKKGHEV
IIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSK
TNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHAD
FIFLSDLALSPPPVSK

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=203, Percent_Identity=35.9605911330049, Blast_Score=133, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 28282; Mature: 28282

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYTIALLIIVLFLPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLSLPIPLTVAVM
CCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHHC
PFLPSTKEDAIAAHKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQE
CCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCCCEECCCCHHHHHHHHHHHHHH
VPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIE
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCEEC
NQLFFDDVYTAGHISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHAD
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
FIFLSDLALSPPPVSK
EEEEECCCCCCCCCCC
>Mature Secondary Structure
MRKYTIALLIIVLFLPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLSLPIPLTVAVM
CCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHHC
PFLPSTKEDAIAAHKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQE
CCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCCCEECCCCHHHHHHHHHHHHHH
VPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIE
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCEEC
NQLFFDDVYTAGHISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHAD
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
FIFLSDLALSPPPVSK
EEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]