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The map label for this gene is pbpX [H]

Identifier: 218235824

GI number: 218235824

Start: 489763

End: 491010

Strand: Direct

Name: pbpX [H]

Synonym: BCB4264_A0505

Alternate gene names: 218235824

Gene position: 489763-491010 (Clockwise)

Preceding gene: 218233096

Following gene: 218234882

Centisome position: 9.04

GC content: 34.54

Gene sequence:

>1248_bases
ATGGATCAGGAAAAAAATAATGCGAATGGGAAAGCACATCGGCCGATTGTATACATAAAAAGAACAATCATTCTCGTCTT
ACTATTATCACTTGTATATTTCATGTATACAAAAATTGTTGCGCATAATAAGAAAGAAGAAACTTTAAAAGCGGCAGCAG
AAATGAAGAAACAAGAAGAGTTAAAAAAGAAAGAAGAAAAAAAGAAACAAGAAGTACAGAAGCAAAAACAAAAAGAGCAG
GAAGAACAAATGAAGCAAGCGCAAGCAGCGGAGAAACCTGCTGAAGGACCACCTCAAGAAATTAATGAAAACGCTCAATT
GGACCAGTATTTACAAAACGCAGGATTTAGCGGGACAGCTGTTATTGTGAAGAACGGAAAAGTTCTTCTGAATAAAGGGT
ATGGTATGGCAAATAAAGAGCAGCAAGTACCGAATAATTCAGAGACGACTTTTTATATTGGTTCTATTTCAAAGGCGTTT
GTAGCAACTGCTATTATGCAATTGAAAGATCAAAATAAATTACAAGTAGAAGATACTGTTGCGAAGTATATTCCAGATTT
TCCACAAGGTAATAATATTCAGCTAAAACATCTATTAACACATACATCAGGGATTCCCGAATATGAGCAGGGAAAAGAAG
ATATTTCTCATGAAGAACTGATAAAGCGGATAGGAAATCAAAAGCGTATTGGTGGTCCAGGAGAGAAGTGGAAGTATTCT
GATTCGAACTACTCTATACTTGCTTATATTGCAGAGAAGGTAAGTGGGCAGTCACTCGAAGAATATATTAAACAACATAT
TTTTACCACTGCCGGTATGAAACATTCTGGCTTTGGCACAGCGTTAGAACAAACAAGATTCCCATCAACGGGTTATAAAA
TAGTAAATAATAATATGACAACACCTAATATTCCAAGCATGTCACAACTATATGGTTGTGGTGATATATACACAAGTGCG
CATGATTTATATTTATTTAACGAAGCACTATTCTCTGGAAAATTAATTTCAAAAGAGAGTTACGATCAAATGTTTACGGG
TGGAAAAAAGGATTACGGGTTTGGATGGTACGTAGACCCAGGAAGCTATTCGAATCATGGTGTAATGCCAGGTTGGAATT
GCTTAAACGGATTTAGTAAAAATGGTAGTGTATATGTTGTTTTATTATCTAACATTCAAAATAATATTAAATCATTTGGT
AAAGTGAATAATGACATTTATTCGATATTGCGGAATATTGAAGTGTAA

Upstream 100 bases:

>100_bases
ATAAAGTAGGGATGATATAGAATGGATTATCCATAATCTACTAAAACGAATCTTTAGTAGACGAATTAAATTATTGGTGA
GTAAGGGGAAAAAAGCAATT

Downstream 100 bases:

>100_bases
GAAACTATCCTATTGGATAGTTTTTTTTATGCTCTGAAACAAATATTTCTTTTAGAAAATGTATGTCTTACCTATCACAA
AAATATCCATTTTGTATACA

Product: putative penicillin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MDQEKNNANGKAHRPIVYIKRTIILVLLLSLVYFMYTKIVAHNKKEETLKAAAEMKKQEELKKKEEKKKQEVQKQKQKEQ
EEQMKQAQAAEKPAEGPPQEINENAQLDQYLQNAGFSGTAVIVKNGKVLLNKGYGMANKEQQVPNNSETTFYIGSISKAF
VATAIMQLKDQNKLQVEDTVAKYIPDFPQGNNIQLKHLLTHTSGIPEYEQGKEDISHEELIKRIGNQKRIGGPGEKWKYS
DSNYSILAYIAEKVSGQSLEEYIKQHIFTTAGMKHSGFGTALEQTRFPSTGYKIVNNNMTTPNIPSMSQLYGCGDIYTSA
HDLYLFNEALFSGKLISKESYDQMFTGGKKDYGFGWYVDPGSYSNHGVMPGWNCLNGFSKNGSVYVVLLSNIQNNIKSFG
KVNNDIYSILRNIEV

Sequences:

>Translated_415_residues
MDQEKNNANGKAHRPIVYIKRTIILVLLLSLVYFMYTKIVAHNKKEETLKAAAEMKKQEELKKKEEKKKQEVQKQKQKEQ
EEQMKQAQAAEKPAEGPPQEINENAQLDQYLQNAGFSGTAVIVKNGKVLLNKGYGMANKEQQVPNNSETTFYIGSISKAF
VATAIMQLKDQNKLQVEDTVAKYIPDFPQGNNIQLKHLLTHTSGIPEYEQGKEDISHEELIKRIGNQKRIGGPGEKWKYS
DSNYSILAYIAEKVSGQSLEEYIKQHIFTTAGMKHSGFGTALEQTRFPSTGYKIVNNNMTTPNIPSMSQLYGCGDIYTSA
HDLYLFNEALFSGKLISKESYDQMFTGGKKDYGFGWYVDPGSYSNHGVMPGWNCLNGFSKNGSVYVVLLSNIQNNIKSFG
KVNNDIYSILRNIEV
>Mature_415_residues
MDQEKNNANGKAHRPIVYIKRTIILVLLLSLVYFMYTKIVAHNKKEETLKAAAEMKKQEELKKKEEKKKQEVQKQKQKEQ
EEQMKQAQAAEKPAEGPPQEINENAQLDQYLQNAGFSGTAVIVKNGKVLLNKGYGMANKEQQVPNNSETTFYIGSISKAF
VATAIMQLKDQNKLQVEDTVAKYIPDFPQGNNIQLKHLLTHTSGIPEYEQGKEDISHEELIKRIGNQKRIGGPGEKWKYS
DSNYSILAYIAEKVSGQSLEEYIKQHIFTTAGMKHSGFGTALEQTRFPSTGYKIVNNNMTTPNIPSMSQLYGCGDIYTSA
HDLYLFNEALFSGKLISKESYDQMFTGGKKDYGFGWYVDPGSYSNHGVMPGWNCLNGFSKNGSVYVVLLSNIQNNIKSFG
KVNNDIYSILRNIEV

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=315, Percent_Identity=25.0793650793651, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786574, Length=287, Percent_Identity=22.9965156794425, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790593, Length=201, Percent_Identity=24.8756218905473, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115533026, Length=352, Percent_Identity=22.7272727272727, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17550934, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 46790; Mature: 46790

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEKNNANGKAHRPIVYIKRTIILVLLLSLVYFMYTKIVAHNKKEETLKAAAEMKKQEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKKKEEKKKQEVQKQKQKEQEEQMKQAQAAEKPAEGPPQEINENAQLDQYLQNAGFSGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCCCCEE
VIVKNGKVLLNKGYGMANKEQQVPNNSETTFYIGSISKAFVATAIMQLKDQNKLQVEDTV
EEEECCEEEEECCCCCCCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEHHHHH
AKYIPDFPQGNNIQLKHLLTHTSGIPEYEQGKEDISHEELIKRIGNQKRIGGPGEKWKYS
HHHCCCCCCCCCEEHHHHHHHCCCCCCHHCCHHCCCHHHHHHHHCCCCCCCCCCCCCEEC
DSNYSILAYIAEKVSGQSLEEYIKQHIFTTAGMKHSGFGTALEQTRFPSTGYKIVNNNMT
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEECCCCC
TPNIPSMSQLYGCGDIYTSAHDLYLFNEALFSGKLISKESYDQMFTGGKKDYGFGWYVDP
CCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECC
GSYSNHGVMPGWNCLNGFSKNGSVYVVLLSNIQNNIKSFGKVNNDIYSILRNIEV
CCCCCCCCCCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDQEKNNANGKAHRPIVYIKRTIILVLLLSLVYFMYTKIVAHNKKEETLKAAAEMKKQEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKKKEEKKKQEVQKQKQKEQEEQMKQAQAAEKPAEGPPQEINENAQLDQYLQNAGFSGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCCCCEE
VIVKNGKVLLNKGYGMANKEQQVPNNSETTFYIGSISKAFVATAIMQLKDQNKLQVEDTV
EEEECCEEEEECCCCCCCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEHHHHH
AKYIPDFPQGNNIQLKHLLTHTSGIPEYEQGKEDISHEELIKRIGNQKRIGGPGEKWKYS
HHHCCCCCCCCCEEHHHHHHHCCCCCCHHCCHHCCCHHHHHHHHCCCCCCCCCCCCCEEC
DSNYSILAYIAEKVSGQSLEEYIKQHIFTTAGMKHSGFGTALEQTRFPSTGYKIVNNNMT
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEECCCCC
TPNIPSMSQLYGCGDIYTSAHDLYLFNEALFSGKLISKESYDQMFTGGKKDYGFGWYVDP
CCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECC
GSYSNHGVMPGWNCLNGFSKNGSVYVVLLSNIQNNIKSFGKVNNDIYSILRNIEV
CCCCCCCCCCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]