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The map label for this gene is fnr [H]

Identifier: 218235747

GI number: 218235747

Start: 2042558

End: 2043250

Strand: Reverse

Name: fnr [H]

Synonym: BCB4264_A2139

Alternate gene names: 218235747

Gene position: 2043250-2042558 (Counterclockwise)

Preceding gene: 218231491

Following gene: 218235591

Centisome position: 37.71

GC content: 32.18

Gene sequence:

>693_bases
GTGGCAAACAGTATGACATTATCTCAAGATTTAAAAGAATTACTTGCATCTGTTGAATATAAAATGCAGATAAAAAAAGG
TAGTTTTATTTTTCAAGAAGGTATGGAGGCAACAGAGCTCTATATCATCCACTCAGGAAAAGTACAAATTAGTAAACTAA
GTGCTGACGGACAAGAATTAACACTTCGAATTTGTTCAGAATATGACATTATTGGAGAATTAACATTGTTCACGGACAAT
GCGAAATACTTATTAAATTCAAAATGTCTTGAGGATGTGGAAGTAGGCGTTATAAAGCGTGAAGCATTAGAAAAAGCATT
ACTCCAAAAACCTGCACTCGTATTTGAATTTATGAAATGGATTAGTGAACATTTAAGAAGAATGCAAACGAAGTTCCGAG
ATTTAGTATTACACGGCAAAAAAGGTGCCCTGTATTCTACCCTTATACGAATGACAAATAGTTACGGTATATTAAAAGAA
AATGGGATTCTCATCGATTTACCATTAACAAATCAAGAACTTGCTAATTTCTGTGCAACTTCACGTGAAAGTGTAAATCG
AATGTTAAATGAATTAAAAAAGCAAGGTACAATTTCAATTCATAAAGGAAAGATTACAATCCACGATTTACAATTTTTAA
AATGTGAAATTGCTTGTGAAGATTGCTCTGCTTCTGTTTGTAGCATTGATTAG

Upstream 100 bases:

>100_bases
CATTGAAATTTCAATTTATTTTTAAAATAGCTCTTGCATTTTCATCATATTTACACTCAAAATAGGAAATGTATTGCTTA
TAAGAAGAAAGGTGATCACT

Downstream 100 bases:

>100_bases
CATCTTATTTAGATGCTAATCTTTTTTCAATTTAAGCTATTTATTAACGGTTATTCCCTATGTAAACAAAAACGAGGCCT
TCCATATTAGACCTCGTTTC

Product: transcriptional regulator, Crp/Fnr family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MANSMTLSQDLKELLASVEYKMQIKKGSFIFQEGMEATELYIIHSGKVQISKLSADGQELTLRICSEYDIIGELTLFTDN
AKYLLNSKCLEDVEVGVIKREALEKALLQKPALVFEFMKWISEHLRRMQTKFRDLVLHGKKGALYSTLIRMTNSYGILKE
NGILIDLPLTNQELANFCATSRESVNRMLNELKKQGTISIHKGKITIHDLQFLKCEIACEDCSASVCSID

Sequences:

>Translated_230_residues
MANSMTLSQDLKELLASVEYKMQIKKGSFIFQEGMEATELYIIHSGKVQISKLSADGQELTLRICSEYDIIGELTLFTDN
AKYLLNSKCLEDVEVGVIKREALEKALLQKPALVFEFMKWISEHLRRMQTKFRDLVLHGKKGALYSTLIRMTNSYGILKE
NGILIDLPLTNQELANFCATSRESVNRMLNELKKQGTISIHKGKITIHDLQFLKCEIACEDCSASVCSID
>Mature_229_residues
ANSMTLSQDLKELLASVEYKMQIKKGSFIFQEGMEATELYIIHSGKVQISKLSADGQELTLRICSEYDIIGELTLFTDNA
KYLLNSKCLEDVEVGVIKREALEKALLQKPALVFEFMKWISEHLRRMQTKFRDLVLHGKKGALYSTLIRMTNSYGILKEN
GILIDLPLTNQELANFCATSRESVNRMLNELKKQGTISIHKGKITIHDLQFLKCEIACEDCSASVCSID

Specific function: It is involved in the activation of genes necessary for anaerobic respiration [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 26048; Mature: 25917

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSMTLSQDLKELLASVEYKMQIKKGSFIFQEGMEATELYIIHSGKVQISKLSADGQEL
CCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHCCCCEEEEEEEECCCEEEEEECCCCHHE
TLRICSEYDIIGELTLFTDNAKYLLNSKCLEDVEVGVIKREALEKALLQKPALVFEFMKW
EEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ISEHLRRMQTKFRDLVLHGKKGALYSTLIRMTNSYGILKENGILIDLPLTNQELANFCAT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHC
SRESVNRMLNELKKQGTISIHKGKITIHDLQFLKCEIACEDCSASVCSID
CHHHHHHHHHHHHHCCCEEEEECEEEEEHHEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
ANSMTLSQDLKELLASVEYKMQIKKGSFIFQEGMEATELYIIHSGKVQISKLSADGQEL
CCCCHHHHHHHHHHHHHHHEEEECCCCCHHHCCCCEEEEEEEECCCEEEEEECCCCHHE
TLRICSEYDIIGELTLFTDNAKYLLNSKCLEDVEVGVIKREALEKALLQKPALVFEFMKW
EEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ISEHLRRMQTKFRDLVLHGKKGALYSTLIRMTNSYGILKENGILIDLPLTNQELANFCAT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHC
SRESVNRMLNELKKQGTISIHKGKITIHDLQFLKCEIACEDCSASVCSID
CHHHHHHHHHHHHHCCCEEEEECEEEEEHHEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8846791; 9384377 [H]