Click here to switch to the map view.

The map label for this gene is gerPD

Identifier: 218235659

GI number: 218235659

Start: 1167371

End: 1167565

Strand: Reverse

Name: gerPD

Synonym: BCB4264_A1197

Alternate gene names: 218235659

Gene position: 1167565-1167371 (Counterclockwise)

Preceding gene: 218230853

Following gene: 218231215

Centisome position: 21.55

GC content: 39.49

Gene sequence:

>195_bases
ATGAACCTTAACGTTGTAAACCGTGAGTTAAAAGTCGGACAGATTAAAATGAACGGTGTATCGTCGTCCGCACTCTTTTT
AATTGGAGATGCAAATCTCCTCATTCTATCTTCTATTCTCGATACACCATTTGAAACAGTTACAGAGGGTCCATTTGTAC
CATTAGTAACAGATGTCCCTCCTACTCCAGGTTAA

Upstream 100 bases:

>100_bases
ACGAGATATCATTATTCAGGCAATGAAACAAGATATTGACAAAGCCTTTCTCTCCTTTATTCAGCACATACCGGGAAATT
TCCGAAAGGAGTAAGTATGT

Downstream 100 bases:

>100_bases
GGAGACTGAGAAATTATGTTGCATCATGTGTCTATTGTCCAAAATGTTTCTATTATTTCTTTAGGGATTGCTGGTGTATT
TCAAGTTGGAGATGCAAACC

Product: spore germination protein GerPD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MNLNVVNRELKVGQIKMNGVSSSALFLIGDANLLILSSILDTPFETVTEGPFVPLVTDVPPTPG

Sequences:

>Translated_64_residues
MNLNVVNRELKVGQIKMNGVSSSALFLIGDANLLILSSILDTPFETVTEGPFVPLVTDVPPTPG
>Mature_64_residues
MNLNVVNRELKVGQIKMNGVSSSALFLIGDANLLILSSILDTPFETVTEGPFVPLVTDVPPTPG

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERPD_BACCE (P0A3T9)

Other databases:

- EMBL:   AF053927
- InterPro:   IPR017257
- PIRSF:   PIRSF037666

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6781; Mature: 6781

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNVVNRELKVGQIKMNGVSSSALFLIGDANLLILSSILDTPFETVTEGPFVPLVTDVP
CCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEEHHHHCCCCCHHCCCCCEEEEECCC
PTPG
CCCC
>Mature Secondary Structure
MNLNVVNRELKVGQIKMNGVSSSALFLIGDANLLILSSILDTPFETVTEGPFVPLVTDVP
CCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEEHHHHCCCCCHHCCCCCEEEEECCC
PTPG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10715007