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The map label for this gene is yaaJ [C]

Identifier: 218235654

GI number: 218235654

Start: 2250289

End: 2251656

Strand: Reverse

Name: yaaJ [C]

Synonym: BCB4264_A2346

Alternate gene names: 218235654

Gene position: 2251656-2250289 (Counterclockwise)

Preceding gene: 218235073

Following gene: 218232374

Centisome position: 41.55

GC content: 37.79

Gene sequence:

>1368_bases
ATGGAGACAGTAAGTAAAGTATTAGAACAAATGAATCAATACGTGTGGGGATTACCAACTTTGTTGCTACTCGTTGGAAC
AGGTATCATTCTCACAGTGCGTTTGAAAGGTTTACAGTTTAGTAAACTATTATACGCTCACAAACTAGCGTTTAAAAAAT
CAGAAGATACTTCTTCTTCTGGAGATATTAGTCACTTCCAAGCACTCATGACAGCTATGGCCGCAACGATTGGTATGGGA
AATATAGCCGGTGTTGCAACAGCGGTTACAATTGGTGGTCCTGGTGCAATATTTTGGATGTGGATTACCGCTTTATTCGG
TATGGCAACAAAGTATGCCGAGGCAATACTTGCAGTAAAATACCGTGTTAGTAATGAAAATGGTGAATATTCAGGTGGAC
CAATGTATTATTTAGAGCGTGGTTTAGGTAAGAAATGGCTGGCAGTATTATTCGCTATATTCGGCACAACTGCTTCTTTC
GGTATTGGTAATATGGTGCAATCTAACTCAGTTGCAGAGGCAATGCGAATTAATTTCTCTTTCCCTCCTGCTTTAACTGG
TATAGTAATGTCATTTTTAATCGCAATTGTTATTTTAGGCGGTGTAAAAAAAATTGGGAAAGTGACGGGATATGTCGTTC
CTATTAAAGCTTTCTTTTATATAATTGCTGGTCTTATAATTATTTTCTATCACTACGACCAAATTCCAGAAGCATTTTCA
CTTATTTTTTCTGGTGCATTTAATGGTACAGCAGCTGCTGGTGGTTTTATTGGGGCAACAGTTGCATCAGCTATTCAAAT
CGGAATGGCGCGTGGTGTATTTGCGAACGAAGCTGGTTTAGGGAGTGCCCCTATTGCCGCGGCGGCGGCAAAAACTGATT
CGCCTGCAAAGCAAGCTTTAGTTTCAATGACTGGTACTTTTCTAGATACGTTTATTGTATGTACAATTACAGGACTAGTA
TTAATTACTACAGGTGCTTGGAGATCTGGTAAAACTGGCGTTGAAGCTACAACACTTGCATTCCAATCTGTATTTGGTAC
TGCTGGTAGTATGATTCTCGGTATCGCAATTATTTTATTTGCCTACTCTACTATTTTAGGCTGGTCGTATTATGGGGAAA
AATGTGTAGCTTATTTATTCGGAGAAAGTGCAGTTAAATATTATAAAGCAATCTTTATTGTTATGATTGCAATTGGTGCT
AATTTAAAGCTAGGAATCGTATGGACATTTGCTGATATTGCAAATGGACTTATGGCAATTCCAAACTTGATTGGTCTAAT
TGGATTAAGTAGTATTGTTGTTGCTGAAACGAATCGCTTTTTACAAGCAGAGAAATTGAAAGAAAATAATAAAAACCAGG
CAAGTTAA

Upstream 100 bases:

>100_bases
AAGCCGATTGTATCGGTTTATTTTTCTATCCCTTGTTTCTCCAGAGACCATTTCATTTACTTGAAGTGGTTTTTATTTTT
TCTAAAAAAGGAGAATAAAG

Downstream 100 bases:

>100_bases
TCTATGAAAAAGGAATGACTCATACATGATGAGCGTTCCTTTTTTCATCCCCTCTTTTACTTAATTACTATTATTAAAAA
TATATTTATATCAATATTTA

Product: sodium/alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
METVSKVLEQMNQYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSSGDISHFQALMTAMAATIGMG
NIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVKYRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASF
GIGNMVQSNSVAEAMRINFSFPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQALVSMTGTFLDTFIVCTITGLV
LITTGAWRSGKTGVEATTLAFQSVFGTAGSMILGIAIILFAYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGA
NLKLGIVWTFADIANGLMAIPNLIGLIGLSSIVVAETNRFLQAEKLKENNKNQAS

Sequences:

>Translated_455_residues
METVSKVLEQMNQYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSSGDISHFQALMTAMAATIGMG
NIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVKYRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASF
GIGNMVQSNSVAEAMRINFSFPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQALVSMTGTFLDTFIVCTITGLV
LITTGAWRSGKTGVEATTLAFQSVFGTAGSMILGIAIILFAYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGA
NLKLGIVWTFADIANGLMAIPNLIGLIGLSSIVVAETNRFLQAEKLKENNKNQAS
>Mature_455_residues
METVSKVLEQMNQYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSSGDISHFQALMTAMAATIGMG
NIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVKYRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASF
GIGNMVQSNSVAEAMRINFSFPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQALVSMTGTFLDTFIVCTITGLV
LITTGAWRSGKTGVEATTLAFQSVFGTAGSMILGIAIILFAYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGA
NLKLGIVWTFADIANGLMAIPNLIGLIGLSSIVVAETNRFLQAEKLKENNKNQAS

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=452, Percent_Identity=36.5044247787611, Blast_Score=253, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48145; Mature: 48145

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVSKVLEQMNQYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
GDISHFQALMTAMAATIGMGNIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVK
CCHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE
YRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASFGIGNMVQSNSVAEAMRINFS
EEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHCCHHHHHHEECCC
FPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQAL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
VSMTGTFLDTFIVCTITGLVLITTGAWRSGKTGVEATTLAFQSVFGTAGSMILGIAIILF
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
AYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGANLKLGIVWTFADIANGLMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH
PNLIGLIGLSSIVVAETNRFLQAEKLKENNKNQAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
METVSKVLEQMNQYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
GDISHFQALMTAMAATIGMGNIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVK
CCHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE
YRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASFGIGNMVQSNSVAEAMRINFS
EEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHCCHHHHHHEECCC
FPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQAL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
VSMTGTFLDTFIVCTITGLVLITTGAWRSGKTGVEATTLAFQSVFGTAGSMILGIAIILF
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
AYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGANLKLGIVWTFADIANGLMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH
PNLIGLIGLSSIVVAETNRFLQAEKLKENNKNQAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]