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The map label for this gene is 218235574

Identifier: 218235574

GI number: 218235574

Start: 544742

End: 546745

Strand: Direct

Name: 218235574

Synonym: BCB4264_A0573

Alternate gene names: NA

Gene position: 544742-546745 (Clockwise)

Preceding gene: 218233791

Following gene: 218232494

Centisome position: 10.05

GC content: 26.75

Gene sequence:

>2004_bases
ATGACTGGGAATAAATTTAATAGGCAAAAAAGTGATTATTTATTAACTGATTTACTTCCTTATGAAAAAGGGAACCATTA
TACTCATAGACATTTCTATGAATATTTACAGAGAGAGAAAGAAACACTGAAGAAATTGTTTAGTAAGATAAAGGGTGAAG
GTAGCTTTAATAGCAATTGGCATTCTTCACCGTTAAAGTTCACTATATCAAAAAAAGGAGATGGATTTCGAGAAATTTCT
TTAATAAACCCGTTAGGTTTGTTAGAATCTTTAGCTTTTATCCATTTATTTGAAAGTGATATTTTAAATATTATCCATAA
TAAAAAAGACTTTTCTACGAGAAAGGCCAGTAGAGTAAATAGTTTAAGTTACAAAAAAGATAAAAATCAAACAGTTTATT
ATTCTGACCTAGTTTCCAAAAATCAACTTCTTATTGCTCTTGAATCAAGTGGAACTTATTTTAGACATTATCCATTCAAA
AATATTACAGAACTTTTGAATAGTAATAGATTTATTTATGCTAGAGATAAGTTTGATTTGTTATTGACAATTGATATACA
GCATTGTTTCCCTAGTATATATACACATTCTTATAAGTGGTTAATAACTAATAAAACGTATGATTCCAAGGGTTTAAGAG
GAGCAGGTTCTGTATATAACAACATTGATACTTTCTTACAGAATATAAATGGATCTAAAACAAATGGTATTATAGTTGGG
CCAGAGATATGTAGGTTATTAGCAGATTTTTTATTTATACACATTGATCAACAGATTATTGGAACTCTGGCAGAAAGGAA
TCTTACATTTAGAACGGACTATAATATTTTTAGGCTTGTCGATGATTATTTTATATGTTCTAAAGATGAAGACACACAGA
ACATTATAAAAGAAGTAATTTCAAACAAATTAAATGAATACCAGCTAAAGATTAATGAATCTAAGGTTGATAAATTTGGT
AAGGGAGAAATTCTTAACACGTGGAAACTTGAAGTATTATCGGTTATTGAGATGATAGAAAAAATATTTAATAATGAAGT
TGAAAAATTAAACAGTAGCATAACTTCTTTGTTATCTAGGATAGAATTAAGCGAAGAATATACTCAAGGATTGCTCGAAG
CAGCGGCAAATTTCGAACTAACAACGCCGAAAAGAAGATATAGAAAAGTAAAATACAGTGATCTTAGAAGTAAAATACTT
TCTACAATTAATGTATCTAATGAAAAATCTCTTGTTTGTTCTTACATATTAAGTACAATTTTAAGTAAAATTGAAGCAAA
AAAAAATGAAGAATTATTAATAAACATGGGGTTAAATGAGTTTATCACTTTTGTCTTTTTTGTTTATTCAACAAATAGCA
ATTATGCCTCTACTCAAAAAATAATACGAATACTTTCTCTTTTAATTGATAAACAGCAATTAGACATTAAAGAATTAATT
GAAAAAAACATTGAAAGATTCGAGGCGGATATATTTACGAAGTTCTCTAATGACTGGATTGATTTACTCTTATTTTTTGC
AACTTACCAAATAAATCTTCCATATAAGTTAATTGAAAAGATTACAGATATTTTTATTAAAGAGGAAAGCCCTGTAAACC
TGGCTGCCTTATGTATATTTGCTGAATCTGAATTTGTAGATTCAACAAGAATTGTTAAATGTGTTAATAAGCTTATCAAG
GAAAAAATAGAAAAAATAAACCGGAAGGAGTTCTTTCAAGATGAACTTGGATGGTGGATATATATTTTTCTATCGTACCC
TAAACTGAATAAGAGATTACAAAAAGAAATGATAGATTATTTAAATGAAGTTAAGTCTGATTTGAGATCTGATAATGTTG
ATAATGCAAAATTAATTGTTTTAAATTTTCTTTTGGATAATGATAAGCACTTTATTGAGTGGAATTTTACAAAAGATAAT
TATTATAAAAATTATTATTTTTATACAAAAGATAGAACTGTCTTTAATCCTGATATTATTGATCAAATAAGTATTTCTAG
ATAA

Upstream 100 bases:

>100_bases
TGAGGCTTTGCCCCACCACTTTTATTTTAAGGATTAGCGAGTGCTAATTCTTGATATTGTGTATTAATAATTTAGCATGT
AATAGTATGGGGTGTCAATT

Downstream 100 bases:

>100_bases
ATAATAAAATATTAATTTTATTTTTAAAAGAAGAAAGGGAAGCCATAACTTTGTGTTTTACAGAGGTGGTTTCCCTTTTT
ATTTTGTTCATCATCAAAAA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MTGNKFNRQKSDYLLTDLLPYEKGNHYTHRHFYEYLQREKETLKKLFSKIKGEGSFNSNWHSSPLKFTISKKGDGFREIS
LINPLGLLESLAFIHLFESDILNIIHNKKDFSTRKASRVNSLSYKKDKNQTVYYSDLVSKNQLLIALESSGTYFRHYPFK
NITELLNSNRFIYARDKFDLLLTIDIQHCFPSIYTHSYKWLITNKTYDSKGLRGAGSVYNNIDTFLQNINGSKTNGIIVG
PEICRLLADFLFIHIDQQIIGTLAERNLTFRTDYNIFRLVDDYFICSKDEDTQNIIKEVISNKLNEYQLKINESKVDKFG
KGEILNTWKLEVLSVIEMIEKIFNNEVEKLNSSITSLLSRIELSEEYTQGLLEAAANFELTTPKRRYRKVKYSDLRSKIL
STINVSNEKSLVCSYILSTILSKIEAKKNEELLINMGLNEFITFVFFVYSTNSNYASTQKIIRILSLLIDKQQLDIKELI
EKNIERFEADIFTKFSNDWIDLLLFFATYQINLPYKLIEKITDIFIKEESPVNLAALCIFAESEFVDSTRIVKCVNKLIK
EKIEKINRKEFFQDELGWWIYIFLSYPKLNKRLQKEMIDYLNEVKSDLRSDNVDNAKLIVLNFLLDNDKHFIEWNFTKDN
YYKNYYFYTKDRTVFNPDIIDQISISR

Sequences:

>Translated_667_residues
MTGNKFNRQKSDYLLTDLLPYEKGNHYTHRHFYEYLQREKETLKKLFSKIKGEGSFNSNWHSSPLKFTISKKGDGFREIS
LINPLGLLESLAFIHLFESDILNIIHNKKDFSTRKASRVNSLSYKKDKNQTVYYSDLVSKNQLLIALESSGTYFRHYPFK
NITELLNSNRFIYARDKFDLLLTIDIQHCFPSIYTHSYKWLITNKTYDSKGLRGAGSVYNNIDTFLQNINGSKTNGIIVG
PEICRLLADFLFIHIDQQIIGTLAERNLTFRTDYNIFRLVDDYFICSKDEDTQNIIKEVISNKLNEYQLKINESKVDKFG
KGEILNTWKLEVLSVIEMIEKIFNNEVEKLNSSITSLLSRIELSEEYTQGLLEAAANFELTTPKRRYRKVKYSDLRSKIL
STINVSNEKSLVCSYILSTILSKIEAKKNEELLINMGLNEFITFVFFVYSTNSNYASTQKIIRILSLLIDKQQLDIKELI
EKNIERFEADIFTKFSNDWIDLLLFFATYQINLPYKLIEKITDIFIKEESPVNLAALCIFAESEFVDSTRIVKCVNKLIK
EKIEKINRKEFFQDELGWWIYIFLSYPKLNKRLQKEMIDYLNEVKSDLRSDNVDNAKLIVLNFLLDNDKHFIEWNFTKDN
YYKNYYFYTKDRTVFNPDIIDQISISR
>Mature_666_residues
TGNKFNRQKSDYLLTDLLPYEKGNHYTHRHFYEYLQREKETLKKLFSKIKGEGSFNSNWHSSPLKFTISKKGDGFREISL
INPLGLLESLAFIHLFESDILNIIHNKKDFSTRKASRVNSLSYKKDKNQTVYYSDLVSKNQLLIALESSGTYFRHYPFKN
ITELLNSNRFIYARDKFDLLLTIDIQHCFPSIYTHSYKWLITNKTYDSKGLRGAGSVYNNIDTFLQNINGSKTNGIIVGP
EICRLLADFLFIHIDQQIIGTLAERNLTFRTDYNIFRLVDDYFICSKDEDTQNIIKEVISNKLNEYQLKINESKVDKFGK
GEILNTWKLEVLSVIEMIEKIFNNEVEKLNSSITSLLSRIELSEEYTQGLLEAAANFELTTPKRRYRKVKYSDLRSKILS
TINVSNEKSLVCSYILSTILSKIEAKKNEELLINMGLNEFITFVFFVYSTNSNYASTQKIIRILSLLIDKQQLDIKELIE
KNIERFEADIFTKFSNDWIDLLLFFATYQINLPYKLIEKITDIFIKEESPVNLAALCIFAESEFVDSTRIVKCVNKLIKE
KIEKINRKEFFQDELGWWIYIFLSYPKLNKRLQKEMIDYLNEVKSDLRSDNVDNAKLIVLNFLLDNDKHFIEWNFTKDNY
YKNYYFYTKDRTVFNPDIIDQISISR

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78511; Mature: 78380

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNKFNRQKSDYLLTDLLPYEKGNHYTHRHFYEYLQREKETLKKLFSKIKGEGSFNSNW
CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HSSPLKFTISKKGDGFREISLINPLGLLESLAFIHLFESDILNIIHNKKDFSTRKASRVN
CCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLSYKKDKNQTVYYSDLVSKNQLLIALESSGTYFRHYPFKNITELLNSNRFIYARDKFDL
CCCCCCCCCCEEEEHHHCCCCCEEEEEECCCCEEEECCHHHHHHHHCCCCEEEEECCEEE
LLTIDIQHCFPSIYTHSYKWLITNKTYDSKGLRGAGSVYNNIDTFLQNINGSKTNGIIVG
EEEEEHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC
PEICRLLADFLFIHIDQQIIGTLAERNLTFRTDYNIFRLVDDYFICSKDEDTQNIIKEVI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHEEECCCCCHHHHHHHHH
SNKLNEYQLKINESKVDKFGKGEILNTWKLEVLSVIEMIEKIFNNEVEKLNSSITSLLSR
HCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELSEEYTQGLLEAAANFELTTPKRRYRKVKYSDLRSKILSTINVSNEKSLVCSYILSTI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LSKIEAKKNEELLINMGLNEFITFVFFVYSTNSNYASTQKIIRILSLLIDKQQLDIKELI
HHHHHCCCCCEEEEECCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCHHCCCHHHHH
EKNIERFEADIFTKFSNDWIDLLLFFATYQINLPYKLIEKITDIFIKEESPVNLAALCIF
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCEEEEEEE
AESEFVDSTRIVKCVNKLIKEKIEKINRKEFFQDELGWWIYIFLSYPKLNKRLQKEMIDY
ECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHH
LNEVKSDLRSDNVDNAKLIVLNFLLDNDKHFIEWNFTKDNYYKNYYFYTKDRTVFNPDII
HHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEECCCHH
DQISISR
CCCCCCC
>Mature Secondary Structure 
TGNKFNRQKSDYLLTDLLPYEKGNHYTHRHFYEYLQREKETLKKLFSKIKGEGSFNSNW
CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HSSPLKFTISKKGDGFREISLINPLGLLESLAFIHLFESDILNIIHNKKDFSTRKASRVN
CCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLSYKKDKNQTVYYSDLVSKNQLLIALESSGTYFRHYPFKNITELLNSNRFIYARDKFDL
CCCCCCCCCCEEEEHHHCCCCCEEEEEECCCCEEEECCHHHHHHHHCCCCEEEEECCEEE
LLTIDIQHCFPSIYTHSYKWLITNKTYDSKGLRGAGSVYNNIDTFLQNINGSKTNGIIVG
EEEEEHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC
PEICRLLADFLFIHIDQQIIGTLAERNLTFRTDYNIFRLVDDYFICSKDEDTQNIIKEVI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHEEECCCCCHHHHHHHHH
SNKLNEYQLKINESKVDKFGKGEILNTWKLEVLSVIEMIEKIFNNEVEKLNSSITSLLSR
HCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELSEEYTQGLLEAAANFELTTPKRRYRKVKYSDLRSKILSTINVSNEKSLVCSYILSTI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LSKIEAKKNEELLINMGLNEFITFVFFVYSTNSNYASTQKIIRILSLLIDKQQLDIKELI
HHHHHCCCCCEEEEECCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCHHCCCHHHHH
EKNIERFEADIFTKFSNDWIDLLLFFATYQINLPYKLIEKITDIFIKEESPVNLAALCIF
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCEEEEEEE
AESEFVDSTRIVKCVNKLIKEKIEKINRKEFFQDELGWWIYIFLSYPKLNKRLQKEMIDY
ECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHH
LNEVKSDLRSDNVDNAKLIVLNFLLDNDKHFIEWNFTKDNYYKNYYFYTKDRTVFNPDII
HHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEECCCHH
DQISISR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA