Click here to switch to the map view.

The map label for this gene is bioC [H]

Identifier: 218235557

GI number: 218235557

Start: 2703117

End: 2703824

Strand: Reverse

Name: bioC [H]

Synonym: BCB4264_A2809

Alternate gene names: 218235557

Gene position: 2703824-2703117 (Counterclockwise)

Preceding gene: 218233742

Following gene: 218234914

Centisome position: 49.89

GC content: 30.65

Gene sequence:

>708_bases
ATGAAAGATTCGATTAAAGATACGTATGATAAATTAGCGAGTACATATAAAGAAAATCTAGATTTTGCAAATCCATATAA
CAGTTATTATGAAAGACCGGCGATGATGGAGCTTATTCCAAAGGAACTAGAAGGAAAAAAGATATTAGATGCTGGATGTG
CAGCTGGATGGTATACTTCTCAATTCATAGGAAGAGGAGCAAATGTTACAGCAATTGATGTAAGTCCTGAAATGGTAAAA
GCAGCAAAAGAAAATATAGGAGAAGAAGCAACGTTCCTTTGTCATGATCTGCAAGAAACATTGCCATTTGAAGATAATAC
GTATGATGTGATTGTAAGTTCGTTAACTCTTCATTACTTAGAAAATTGGAATCAAGTATTTCAAGAATTTCGTCGTGTAT
TGAAGCCAGGTGGGGAACTTATTTATTCTATTCATCATCCTTTTATGGATTTCACAAAGTTTCTATGTGAAAATTATTTT
GAAAAACAGTTATTAATAGATACTTGGGTTAAACCGAATATTACTATTGAAGTCAAGTTTTTTAGAAGATCATTACAAGA
CATACTAAATGAAACTACAAATTATTTTGTATTAGAAGAGATAGTAGAACCGAAGGCAATTGAAAAAATGAAAGAAGTAG
ACGAGAAATCATATTATTATCTAAATACGAATCCACATTTTCTTATCATTAAAGCAACTAATAAATAG

Upstream 100 bases:

>100_bases
TAATAAAATGATTGATTGGTCGTATGATCTAGTATTACAATCATTTTCAAAGAAAAAACAGCAGGAGTTAATGGATTAAT
ATGTATTAGGAGTGTGTGTA

Downstream 100 bases:

>100_bases
CTAGTAAAATAACTTTGTTTTACTAGCTATTTACAGTTTTACATTACATATTAGGGGACTTTAAAATGAATACGAAACGA
AATAGAGTAGTATATGCACT

Product: ubiquinone/menaquinone biosynthesis methyltransferase ubie

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKDSIKDTYDKLASTYKENLDFANPYNSYYERPAMMELIPKELEGKKILDAGCAAGWYTSQFIGRGANVTAIDVSPEMVK
AAKENIGEEATFLCHDLQETLPFEDNTYDVIVSSLTLHYLENWNQVFQEFRRVLKPGGELIYSIHHPFMDFTKFLCENYF
EKQLLIDTWVKPNITIEVKFFRRSLQDILNETTNYFVLEEIVEPKAIEKMKEVDEKSYYYLNTNPHFLIIKATNK

Sequences:

>Translated_235_residues
MKDSIKDTYDKLASTYKENLDFANPYNSYYERPAMMELIPKELEGKKILDAGCAAGWYTSQFIGRGANVTAIDVSPEMVK
AAKENIGEEATFLCHDLQETLPFEDNTYDVIVSSLTLHYLENWNQVFQEFRRVLKPGGELIYSIHHPFMDFTKFLCENYF
EKQLLIDTWVKPNITIEVKFFRRSLQDILNETTNYFVLEEIVEPKAIEKMKEVDEKSYYYLNTNPHFLIIKATNK
>Mature_235_residues
MKDSIKDTYDKLASTYKENLDFANPYNSYYERPAMMELIPKELEGKKILDAGCAAGWYTSQFIGRGANVTAIDVSPEMVK
AAKENIGEEATFLCHDLQETLPFEDNTYDVIVSSLTLHYLENWNQVFQEFRRVLKPGGELIYSIHHPFMDFTKFLCENYF
EKQLLIDTWVKPNITIEVKFFRRSLQDILNETTNYFVLEEIVEPKAIEKMKEVDEKSYYYLNTNPHFLIIKATNK

Specific function: BioC is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786994, Length=110, Percent_Identity=30.9090909090909, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011814
- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27509; Mature: 27509

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSIKDTYDKLASTYKENLDFANPYNSYYERPAMMELIPKELEGKKILDAGCAAGWYTS
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCHHHH
QFIGRGANVTAIDVSPEMVKAAKENIGEEATFLCHDLQETLPFEDNTYDVIVSSLTLHYL
HHHCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ENWNQVFQEFRRVLKPGGELIYSIHHPFMDFTKFLCENYFEKQLLIDTWVKPNITIEVKF
HHHHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
FRRSLQDILNETTNYFVLEEIVEPKAIEKMKEVDEKSYYYLNTNPHFLIIKATNK
HHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MKDSIKDTYDKLASTYKENLDFANPYNSYYERPAMMELIPKELEGKKILDAGCAAGWYTS
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCHHHH
QFIGRGANVTAIDVSPEMVKAAKENIGEEATFLCHDLQETLPFEDNTYDVIVSSLTLHYL
HHHCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ENWNQVFQEFRRVLKPGGELIYSIHHPFMDFTKFLCENYFEKQLLIDTWVKPNITIEVKF
HHHHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
FRRSLQDILNETTNYFVLEEIVEPKAIEKMKEVDEKSYYYLNTNPHFLIIKATNK
HHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]