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The map label for this gene is ycgR [H]

Identifier: 218235323

GI number: 218235323

Start: 1683867

End: 1684844

Strand: Direct

Name: ycgR [H]

Synonym: BCB4264_A1777

Alternate gene names: 218235323

Gene position: 1683867-1684844 (Clockwise)

Preceding gene: 218230878

Following gene: 218234773

Centisome position: 31.07

GC content: 33.03

Gene sequence:

>978_bases
TTGGTCTTTAATAGAGTTTCAAAAGAAGTAGTAGGCATAGCTCTTATCGCTATGTTTCTCTTTTTATTATTTTTTGTAGA
TTTTACAAGTCTAGTAAATTTGCATAAAAATATGCCGCAGGAATGGTTGAATGTGAATACGGTATTTTTAAGTATCATTT
TTGAAGCAATACCTTTTATTTTATTAGGGGTCATTGTTTCTTCATGTATTCAAGTGTTTGTGACGGAAGATATGATTCAA
AAAGTAATGCCGAAATCTCCAATTGTTGCAATGATTCCAGCAGTATTTGTGGGAGTTCTTTTTCCAATGTGTGAATGTGT
CATTATACCAATTGTAAGAAGGCTCATTCAAAAGGGGTTACCACTTCATGTAGGCATTGTTATTTTAATGAGTGCACCCA
TTATGAATCCAGTTGTTCTTTTATCTACTGTATATGCGTTTCCAAAAAATGATTACGTTGTATATGCACGCTTTGGGATA
ACAATTCTAGTTGCTCTATTCATAGGTCTAATTGTGTATTATTGCTATCGCGAAAGAAATGTTTTAAAAGACGTAGAGGT
TTCAGTTCAAACAAGCAAAAAAAAGAGTTGGAAAGATGTTATGAATCACATTGTAGATGAGTTTTTTGATACTGGTAAAT
ATTTATTGATTGGTGCTTTTTTAGCAAGTGTATTTCAAACGTTTTTTGATCGGAATATACTGGATGCAGTAGCACATAAC
GAAGTAATTGCCCCCTTTATTATGATGGGATTTGGTTATGTTTTATCAATTTGCTCTGCAGCCGATGCTTTTATAGCGGC
ATCTTTTGGACATGTTTTCTCGGTAAAGGCACTTCTTGCATTTCTTGTGTTTGGGCCTATGCTTGATATGAAAAATACGT
TAATGCTATTTGCGTATTTTCAAAAGAGATTTGTATTCTTTTTGATGGGAATTGTCATTGTATCTGTGTATACCATCCTG
CAAATCATAATGTTATAG

Upstream 100 bases:

>100_bases
TTACGATTTAAGAATAGAAATAGACTATAAAATTTGTGCTGTAGTATGAAGCATTTGGACAAGCACATGTTTACATATAA
ATAAAATGGAGGCGAGAAGC

Downstream 100 bases:

>100_bases
GAGGTGAGAAAGAATGGGGAACGAGGAGCAGAAGGCATATCATTGCTATATTCGTGGCATTATTTTAATTGGTTTAGCAA
TGCTCTTATTTAAACTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MVFNRVSKEVVGIALIAMFLFLLFFVDFTSLVNLHKNMPQEWLNVNTVFLSIIFEAIPFILLGVIVSSCIQVFVTEDMIQ
KVMPKSPIVAMIPAVFVGVLFPMCECVIIPIVRRLIQKGLPLHVGIVILMSAPIMNPVVLLSTVYAFPKNDYVVYARFGI
TILVALFIGLIVYYCYRERNVLKDVEVSVQTSKKKSWKDVMNHIVDEFFDTGKYLLIGAFLASVFQTFFDRNILDAVAHN
EVIAPFIMMGFGYVLSICSAADAFIAASFGHVFSVKALLAFLVFGPMLDMKNTLMLFAYFQKRFVFFLMGIVIVSVYTIL
QIIML

Sequences:

>Translated_325_residues
MVFNRVSKEVVGIALIAMFLFLLFFVDFTSLVNLHKNMPQEWLNVNTVFLSIIFEAIPFILLGVIVSSCIQVFVTEDMIQ
KVMPKSPIVAMIPAVFVGVLFPMCECVIIPIVRRLIQKGLPLHVGIVILMSAPIMNPVVLLSTVYAFPKNDYVVYARFGI
TILVALFIGLIVYYCYRERNVLKDVEVSVQTSKKKSWKDVMNHIVDEFFDTGKYLLIGAFLASVFQTFFDRNILDAVAHN
EVIAPFIMMGFGYVLSICSAADAFIAASFGHVFSVKALLAFLVFGPMLDMKNTLMLFAYFQKRFVFFLMGIVIVSVYTIL
QIIML
>Mature_325_residues
MVFNRVSKEVVGIALIAMFLFLLFFVDFTSLVNLHKNMPQEWLNVNTVFLSIIFEAIPFILLGVIVSSCIQVFVTEDMIQ
KVMPKSPIVAMIPAVFVGVLFPMCECVIIPIVRRLIQKGLPLHVGIVILMSAPIMNPVVLLSTVYAFPKNDYVVYARFGI
TILVALFIGLIVYYCYRERNVLKDVEVSVQTSKKKSWKDVMNHIVDEFFDTGKYLLIGAFLASVFQTFFDRNILDAVAHN
EVIAPFIMMGFGYVLSICSAADAFIAASFGHVFSVKALLAFLVFGPMLDMKNTLMLFAYFQKRFVFFLMGIVIVSVYTIL
QIIML

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36691; Mature: 36691

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFNRVSKEVVGIALIAMFLFLLFFVDFTSLVNLHKNMPQEWLNVNTVFLSIIFEAIPFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LLGVIVSSCIQVFVTEDMIQKVMPKSPIVAMIPAVFVGVLFPMCECVIIPIVRRLIQKGL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLHVGIVILMSAPIMNPVVLLSTVYAFPKNDYVVYARFGITILVALFIGLIVYYCYRERN
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VLKDVEVSVQTSKKKSWKDVMNHIVDEFFDTGKYLLIGAFLASVFQTFFDRNILDAVAHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVIAPFIMMGFGYVLSICSAADAFIAASFGHVFSVKALLAFLVFGPMLDMKNTLMLFAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKRFVFFLMGIVIVSVYTILQIIML
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVFNRVSKEVVGIALIAMFLFLLFFVDFTSLVNLHKNMPQEWLNVNTVFLSIIFEAIPFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LLGVIVSSCIQVFVTEDMIQKVMPKSPIVAMIPAVFVGVLFPMCECVIIPIVRRLIQKGL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLHVGIVILMSAPIMNPVVLLSTVYAFPKNDYVVYARFGITILVALFIGLIVYYCYRERN
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VLKDVEVSVQTSKKKSWKDVMNHIVDEFFDTGKYLLIGAFLASVFQTFFDRNILDAVAHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVIAPFIMMGFGYVLSICSAADAFIAASFGHVFSVKALLAFLVFGPMLDMKNTLMLFAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKRFVFFLMGIVIVSVYTILQIIML
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]