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The map label for this gene is ybbF [H]

Identifier: 218235294

GI number: 218235294

Start: 844088

End: 845452

Strand: Direct

Name: ybbF [H]

Synonym: BCB4264_A0877

Alternate gene names: 218235294

Gene position: 844088-845452 (Clockwise)

Preceding gene: 218230974

Following gene: 218231031

Centisome position: 15.58

GC content: 40.0

Gene sequence:

>1365_bases
ATGAAGAAAGAAGAGAGAATGGCCAAGGAAATTTCGGAGCAACTTGGAGGAATAAAAAATATTCGTAGTATTGCTCATTG
TATGACGAGACTGCGATTAACGCTTCATGATGAAAGTAAAGTAAACATGGACCTTTTGAAAAAAGTTGAAGGCGTTATGG
GTGTTATAGAAGATGAGACGCTTCAAGTTGTCGTTGGTCCGGGAACAGTAAATAAAGTGGCAGCTGAAATGGAAGGTTTG
ACAGGACTACGAATTGGTGAGGTAGCAGATCATCACCTTGAAGATATTGGGCAAGAGATGAAGTCAGAGATTAAGAAGAA
AAATAATACACCGGTGAAAAACTTTTTACGAAAAATAGGGAGTATTTTCATCCCATTAATTCCAGGTCTTGTTGCGTCAG
GAATTATAAACGGGGTTGCTAACTTTGCGAAAAACGCTGGTGCTGATCCAAATGCAACGTGGTTACAAATGTTACTACTC
ATTGGCGGCGGTATCTTTACATTCTTAGGAATTTTAGTCGGCTGGAATACAGCGAAAGAATTTGGCGGGACACCGGTTCT
TGGGGCAATTGCTGGTATTCTAATTTTCAATCCGGCGATGGCAAACGTAAAATTGTTTGGTGAAGCATTAGTGCCTGGAA
GAGGCGGATTGTTTGCAGTTATTTTTGCAGCATGGCTTATGGTTGTAGTGGAAAGACAAGTTCGAAAAGCAGTGCCGAAT
GCAGTTGATATAATCGTGACGCCACTCATTACTGTATTAGTTGTAAGTATCGTAACGATGTTAGCCATTCAGCCATTAGC
AGGTTTCTTATCAGATGGTATTACGAGCGGAATTAATGCTATTTTAAATATTGGCGGAGCATTTGCTGGCGCAGTACTTG
CGGGAACATTTTTACCTCTCGTTATGGTCGGATTGCATCACGGTTTAACACCAATTCATATGGAATTTATTAATCAAACA
CACGTAACACCTTTATTACCAGTACTCGCAATGGCTGGTGCTGGCCAAGTGGGCGCAGCAATTGCGATTTATGTGAAAAC
AAAAAACAAACGACTTCGAAATGTAATTAAAGGTGGATTGCCAGTTGGCTTTTTAGGAATTGGTGAGCCGTTATTATACG
GGGTGACATTACCACTTGGGAAACCGTTTATTACTGCTTGTTTAGGAGCGGCTGTCGGTGGTGCATTCCAAGCAGTTATG
CAAACAGCTTCTCTTGGAATTGGCGTATCAGGGCTATCTTTAATTCCATTAATTGCTGACAATAAATATTTACTATATTT
CTTAGGTTTAGTAATTGCATATGCTTTCGGATTTATCTTTACGTACTTCTTCGGATTTAAAGAAGAAATGGCAGAAAACA
TATAG

Upstream 100 bases:

>100_bases
GTTGTTGCAGTGTGAATATGGGGAAGCACTGGAGAAACTAAAATACGCTAAAGGGTTTGTGAAGAAAGCACTATAAAATA
ATAGGGAGGGGGATTCTATT

Downstream 100 bases:

>100_bases
AGAAAGGGATTCCTTTCTCTTTTTCTATTAATAGAAAGGGAGATTTATATGATCGGAGTTTCCATTTATCTTTCAAAAGA
ACGAGTAGAGAAACAAGAAG

Product: PTS system, sucrose-specific IIBC component

Products: NA

Alternate protein names: Phosphotransferase enzyme IIB component; PTS system EIIB component; Permease IIC component; PTS system EIIC component [H]

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MKKEERMAKEISEQLGGIKNIRSIAHCMTRLRLTLHDESKVNMDLLKKVEGVMGVIEDETLQVVVGPGTVNKVAAEMEGL
TGLRIGEVADHHLEDIGQEMKSEIKKKNNTPVKNFLRKIGSIFIPLIPGLVASGIINGVANFAKNAGADPNATWLQMLLL
IGGGIFTFLGILVGWNTAKEFGGTPVLGAIAGILIFNPAMANVKLFGEALVPGRGGLFAVIFAAWLMVVVERQVRKAVPN
AVDIIVTPLITVLVVSIVTMLAIQPLAGFLSDGITSGINAILNIGGAFAGAVLAGTFLPLVMVGLHHGLTPIHMEFINQT
HVTPLLPVLAMAGAGQVGAAIAIYVKTKNKRLRNVIKGGLPVGFLGIGEPLLYGVTLPLGKPFITACLGAAVGGAFQAVM
QTASLGIGVSGLSLIPLIADNKYLLYFLGLVIAYAFGFIFTYFFGFKEEMAENI

Sequences:

>Translated_454_residues
MKKEERMAKEISEQLGGIKNIRSIAHCMTRLRLTLHDESKVNMDLLKKVEGVMGVIEDETLQVVVGPGTVNKVAAEMEGL
TGLRIGEVADHHLEDIGQEMKSEIKKKNNTPVKNFLRKIGSIFIPLIPGLVASGIINGVANFAKNAGADPNATWLQMLLL
IGGGIFTFLGILVGWNTAKEFGGTPVLGAIAGILIFNPAMANVKLFGEALVPGRGGLFAVIFAAWLMVVVERQVRKAVPN
AVDIIVTPLITVLVVSIVTMLAIQPLAGFLSDGITSGINAILNIGGAFAGAVLAGTFLPLVMVGLHHGLTPIHMEFINQT
HVTPLLPVLAMAGAGQVGAAIAIYVKTKNKRLRNVIKGGLPVGFLGIGEPLLYGVTLPLGKPFITACLGAAVGGAFQAVM
QTASLGIGVSGLSLIPLIADNKYLLYFLGLVIAYAFGFIFTYFFGFKEEMAENI
>Mature_454_residues
MKKEERMAKEISEQLGGIKNIRSIAHCMTRLRLTLHDESKVNMDLLKKVEGVMGVIEDETLQVVVGPGTVNKVAAEMEGL
TGLRIGEVADHHLEDIGQEMKSEIKKKNNTPVKNFLRKIGSIFIPLIPGLVASGIINGVANFAKNAGADPNATWLQMLLL
IGGGIFTFLGILVGWNTAKEFGGTPVLGAIAGILIFNPAMANVKLFGEALVPGRGGLFAVIFAAWLMVVVERQVRKAVPN
AVDIIVTPLITVLVVSIVTMLAIQPLAGFLSDGITSGINAILNIGGAFAGAVLAGTFLPLVMVGLHHGLTPIHMEFINQT
HVTPLLPVLAMAGAGQVGAAIAIYVKTKNKRLRNVIKGGLPVGFLGIGEPLLYGVTLPLGKPFITACLGAAVGGAFQAVM
QTASLGIGVSGLSLIPLIADNKYLLYFLGLVIAYAFGFIFTYFFGFKEEMAENI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788769, Length=480, Percent_Identity=39.7916666666667, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1790159, Length=424, Percent_Identity=30.4245283018868, Blast_Score=179, Evalue=4e-46,
Organism=Escherichia coli, GI2367362, Length=442, Percent_Identity=25.1131221719457, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI48994906, Length=476, Percent_Identity=26.890756302521, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018113
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013 [H]

Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 48026; Mature: 48026

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEERMAKEISEQLGGIKNIRSIAHCMTRLRLTLHDESKVNMDLLKKVEGVMGVIEDET
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
LQVVVGPGTVNKVAAEMEGLTGLRIGEVADHHLEDIGQEMKSEIKKKNNTPVKNFLRKIG
EEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SIFIPLIPGLVASGIINGVANFAKNAGADPNATWLQMLLLIGGGIFTFLGILVGWNTAKE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHH
FGGTPVLGAIAGILIFNPAMANVKLFGEALVPGRGGLFAVIFAAWLMVVVERQVRKAVPN
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
AVDIIVTPLITVLVVSIVTMLAIQPLAGFLSDGITSGINAILNIGGAFAGAVLAGTFLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMVGLHHGLTPIHMEFINQTHVTPLLPVLAMAGAGQVGAAIAIYVKTKNKRLRNVIKGGL
HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCC
PVGFLGIGEPLLYGVTLPLGKPFITACLGAAVGGAFQAVMQTASLGIGVSGLSLIPLIAD
CEEECCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEC
NKYLLYFLGLVIAYAFGFIFTYFFGFKEEMAENI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKEERMAKEISEQLGGIKNIRSIAHCMTRLRLTLHDESKVNMDLLKKVEGVMGVIEDET
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
LQVVVGPGTVNKVAAEMEGLTGLRIGEVADHHLEDIGQEMKSEIKKKNNTPVKNFLRKIG
EEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SIFIPLIPGLVASGIINGVANFAKNAGADPNATWLQMLLLIGGGIFTFLGILVGWNTAKE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHH
FGGTPVLGAIAGILIFNPAMANVKLFGEALVPGRGGLFAVIFAAWLMVVVERQVRKAVPN
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
AVDIIVTPLITVLVVSIVTMLAIQPLAGFLSDGITSGINAILNIGGAFAGAVLAGTFLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMVGLHHGLTPIHMEFINQTHVTPLLPVLAMAGAGQVGAAIAIYVKTKNKRLRNVIKGGL
HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCC
PVGFLGIGEPLLYGVTLPLGKPFITACLGAAVGGAFQAVMQTASLGIGVSGLSLIPLIAD
CEEECCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEC
NKYLLYFLGLVIAYAFGFIFTYFFGFKEEMAENI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]