Click here to switch to the map view.

The map label for this gene is 218235252

Identifier: 218235252

GI number: 218235252

Start: 3206524

End: 3207648

Strand: Reverse

Name: 218235252

Synonym: BCB4264_A3326

Alternate gene names: NA

Gene position: 3207648-3206524 (Counterclockwise)

Preceding gene: 218234731

Following gene: 218231897

Centisome position: 59.19

GC content: 34.4

Gene sequence:

>1125_bases
GTGAAGGAGATAAACATTCATAAAATAATTGCGGATAAGAGAAAAGAAAAGGGAATTACGCAGGAAGAGTTAGCGATGTA
TATTGGTATTACGAAGGCATCTGTTTCCAAATGGGAGACAGGGCAGAGTTATCCGGATATTACATTTTTACCACTGTTAG
CATCGTACTTTAATGTAAGTATAGATGAACTAATCTGTTATACACCGCAAATGGAACCGGAAGGTATTAGGAATTTATAT
CATCGACTAGCGGAAGCTTTTAGTGAAGAACCATTTGATGAAGTAATGATAGAGTGCAGAGGAATCATCAAAAAATATTA
TTCTTGTTTTTCGTTATTACTTCAAATGGGACTACTTTTTATTAATCACCATATGTTAACAGAGGATACGGATAAAAGAA
TTGAAATGTTAGAAGAGGCAATGCATCTCTTTAGCAGAGTGCAAGAAGAAAGTAACGATGTTTCTCTTGTGAAAGAGGCG
ATATCGTTTCAAGCAACTTGCTATCTTATACTCAATAAAGCGAATGAAGTATTGCAATTGCTTGGCGAAACGATACGTCC
TAACGTTCCAGAGGAGGATTTAATTGCACAGGCGTATCAAATACTTGGAAATAATGAAAAAGCAAATGAAATAATGCAAA
TTAGTATGTATCAACATTTAATACAACTCGTTGCGACAATACCGAATTATGTAGTAGTAAATGCTTCAAGCGCTGAAAAG
GTAGAGGTAATTTTAAATAGAGCTTTTATGTTAATAGATATATATGAAATAGAAACATTACATCCCAATATGACTTTAAA
AGTATACTATGCTGCTGCGCAAGTATATTGTATGCAAGGCAATTTTGAAAGAGCATTAGAAATGTTACGGAAATATGTAG
CAGTTTGTGCGGCAAGCTTCACAGTAAATAGTCTGCATTTACACGGTGATTCCTATTTTGATGCGATTGATGGATGGTTT
GCAGAGTTTCCGCTCGGCGCTAAAACAGTTAGAAATGAAGAGATTATAAAGCGAAGCATGTTACAAAGTATTGCAGAGAA
TCCAGTTTTCGCTCCGATGAAAGATGTAAGAGAGTATAAAAATATAATAGCGAGTTTGAAATTTAAATTGGATATAAAAG
AATAG

Upstream 100 bases:

>100_bases
GAGAGATGTTTCCTAACAGTTGATTTTGTTAACGAAAGTCGACTTTAAATCCATATTTTGTGTGAAATAAAAGCATATAA
TAAAAGTATGAGGTGATGAT

Downstream 100 bases:

>100_bases
AGGGAGGAAAAAATGATGAATTTTGATGAATATGAAATAGTGATAAATAGTGAATTTACTTTGCATGGAACGATTACAAG
GCCGAAAGTTGATGGGAAGT

Product: DNA-binding protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; HTH Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family; HTH Motif Containing Protein; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKEINIHKIIADKRKEKGITQEELAMYIGITKASVSKWETGQSYPDITFLPLLASYFNVSIDELICYTPQMEPEGIRNLY
HRLAEAFSEEPFDEVMIECRGIIKKYYSCFSLLLQMGLLFINHHMLTEDTDKRIEMLEEAMHLFSRVQEESNDVSLVKEA
ISFQATCYLILNKANEVLQLLGETIRPNVPEEDLIAQAYQILGNNEKANEIMQISMYQHLIQLVATIPNYVVVNASSAEK
VEVILNRAFMLIDIYEIETLHPNMTLKVYYAAAQVYCMQGNFERALEMLRKYVAVCAASFTVNSLHLHGDSYFDAIDGWF
AEFPLGAKTVRNEEIIKRSMLQSIAENPVFAPMKDVREYKNIIASLKFKLDIKE

Sequences:

>Translated_374_residues
MKEINIHKIIADKRKEKGITQEELAMYIGITKASVSKWETGQSYPDITFLPLLASYFNVSIDELICYTPQMEPEGIRNLY
HRLAEAFSEEPFDEVMIECRGIIKKYYSCFSLLLQMGLLFINHHMLTEDTDKRIEMLEEAMHLFSRVQEESNDVSLVKEA
ISFQATCYLILNKANEVLQLLGETIRPNVPEEDLIAQAYQILGNNEKANEIMQISMYQHLIQLVATIPNYVVVNASSAEK
VEVILNRAFMLIDIYEIETLHPNMTLKVYYAAAQVYCMQGNFERALEMLRKYVAVCAASFTVNSLHLHGDSYFDAIDGWF
AEFPLGAKTVRNEEIIKRSMLQSIAENPVFAPMKDVREYKNIIASLKFKLDIKE
>Mature_374_residues
MKEINIHKIIADKRKEKGITQEELAMYIGITKASVSKWETGQSYPDITFLPLLASYFNVSIDELICYTPQMEPEGIRNLY
HRLAEAFSEEPFDEVMIECRGIIKKYYSCFSLLLQMGLLFINHHMLTEDTDKRIEMLEEAMHLFSRVQEESNDVSLVKEA
ISFQATCYLILNKANEVLQLLGETIRPNVPEEDLIAQAYQILGNNEKANEIMQISMYQHLIQLVATIPNYVVVNASSAEK
VEVILNRAFMLIDIYEIETLHPNMTLKVYYAAAQVYCMQGNFERALEMLRKYVAVCAASFTVNSLHLHGDSYFDAIDGWF
AEFPLGAKTVRNEEIIKRSMLQSIAENPVFAPMKDVREYKNIIASLKFKLDIKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43003; Mature: 43003

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEINIHKIIADKRKEKGITQEELAMYIGITKASVSKWETGQSYPDITFLPLLASYFNVS
CCCCCHHHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
IDELICYTPQMEPEGIRNLYHRLAEAFSEEPFDEVMIECRGIIKKYYSCFSLLLQMGLLF
HHHHEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INHHMLTEDTDKRIEMLEEAMHLFSRVQEESNDVSLVKEAISFQATCYLILNKANEVLQL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHH
LGETIRPNVPEEDLIAQAYQILGNNEKANEIMQISMYQHLIQLVATIPNYVVVNASSAEK
HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
VEVILNRAFMLIDIYEIETLHPNMTLKVYYAAAQVYCMQGNFERALEMLRKYVAVCAASF
HHHHHHHHHHEEEEEEEEEECCCCEEEEEEEEEEHEEECCCHHHHHHHHHHHHHHHHHHH
TVNSLHLHGDSYFDAIDGWFAEFPLGAKTVRNEEIIKRSMLQSIAENPVFAPMKDVREYK
EEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
NIIASLKFKLDIKE
HHHHHHHHEEEECC
>Mature Secondary Structure
MKEINIHKIIADKRKEKGITQEELAMYIGITKASVSKWETGQSYPDITFLPLLASYFNVS
CCCCCHHHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
IDELICYTPQMEPEGIRNLYHRLAEAFSEEPFDEVMIECRGIIKKYYSCFSLLLQMGLLF
HHHHEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INHHMLTEDTDKRIEMLEEAMHLFSRVQEESNDVSLVKEAISFQATCYLILNKANEVLQL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHH
LGETIRPNVPEEDLIAQAYQILGNNEKANEIMQISMYQHLIQLVATIPNYVVVNASSAEK
HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
VEVILNRAFMLIDIYEIETLHPNMTLKVYYAAAQVYCMQGNFERALEMLRKYVAVCAASF
HHHHHHHHHHEEEEEEEEEECCCCEEEEEEEEEEHEEECCCHHHHHHHHHHHHHHHHHHH
TVNSLHLHGDSYFDAIDGWFAEFPLGAKTVRNEEIIKRSMLQSIAENPVFAPMKDVREYK
EEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
NIIASLKFKLDIKE
HHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA