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The map label for this gene is dppC [H]

Identifier: 218235165

GI number: 218235165

Start: 183880

End: 184884

Strand: Direct

Name: dppC [H]

Synonym: BCB4264_A0211

Alternate gene names: 218235165

Gene position: 183880-184884 (Clockwise)

Preceding gene: 218235941

Following gene: 218232032

Centisome position: 3.39

GC content: 37.81

Gene sequence:

>1005_bases
ATGGGGGCTTATGAAATTAATGACCAGTTATTAACAAATGAAGAGAAAAAAGAATTAACGATAAATAAAAATCAGCAAAC
GATTAGCAGAAAGAAAGAAGTGTTTCGTAAGTTTATATCGAATCCAATCGCAGTTTTAGGAACAGTGACGTTATTGCTAA
TTATTGTTTTCTCGCTTATTGGCGAAAGTTTAACTTCATTTACTGCGAGTGAACAAGTAAAAGAGGCAACAAATTTACCG
CCGAGTAGTGAACATTGGTTTGGAACAGATGATTTAGGGAGAGATATTTGGGCACGTACTTGGGCTGGTGGGAAGATTTC
ACTAACAGTGGGATTAGTAGCAGCTGCCCTCGATATAGGGCTTGGTGTACTGATTGGTGGATTTAGTGGATACGTGAGAG
GGCGTAATCGCCTTGGAACGTTAATTGATGAGTGGATTATAAGAGGAATTGAAGTATTATACGGCATCCCATATTTATTA
ATTGTTATTTTACTATTAATTGTTATGAAACCAGGTCTTTTCACCATTATTATCGCCCTTGCATTAACGGGATGGATTGG
AATGGCTCGTCTCATTCGAGCACAAGTATTGTCTTTAAAACAACGAGAGTTTGTTATTGCAGCAGAGCGATTAGGTACAT
CACATATGAAAATTATATATGGGCATTTAATTCCGAATTTAACAGGCATTATTATCGTCAATTTATCATTTACAATTCCG
GCAGCTATTTTTTCAGAATCATTTTTAAGCTTTATAGGACTTGGGGTACAATCACCAGCGGCAAGTTGGGGGACGATGAC
GAATGACGCACTCGGGACATTATTGAGCGGAGAATGGTGGCAACTATTTTTCCCAGCAATCATGATTGCACTCATTATGT
TCGCATTTAATGCAATTGGTGATGGTTTGCAAGATGCAATTGATCCAAAAATCGTAAAACGGAATCGAAAGGAGAAAAAA
CATGGGACAGCTCTTATCTTTAGAAAACGTAACGTTAGCCGTTGA

Upstream 100 bases:

>100_bases
TATAGTGCATTATTAATTGCTTGTATTTTCATTACAGATATTATTCACCGTATTGTTGATCCACGTATTCGTTCTATTAC
GTAAGGAGGGGGATGTTTAG

Downstream 100 bases:

>100_bases
AAAAGAGAATAGTAAGCAAGCAATTGTGAAACATGTTTCCTTTTCTATTAACGAAGGTGAAATAGTTGCACTTGTAGGAG
AAAGTGGTTCAGGAAAAAGT

Product: oligopeptide ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGAYEINDQLLTNEEKKELTINKNQQTISRKKEVFRKFISNPIAVLGTVTLLLIIVFSLIGESLTSFTASEQVKEATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKK
HGTALIFRKRNVSR

Sequences:

>Translated_334_residues
MGAYEINDQLLTNEEKKELTINKNQQTISRKKEVFRKFISNPIAVLGTVTLLLIIVFSLIGESLTSFTASEQVKEATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKK
HGTALIFRKRNVSR
>Mature_333_residues
GAYEINDQLLTNEEKKELTINKNQQTISRKKEVFRKFISNPIAVLGTVTLLLIIVFSLIGESLTSFTASEQVKEATNLPP
SSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLLI
VILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIPA
AIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKKH
GTALIFRKRNVSR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=303, Percent_Identity=37.6237623762376, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1787054, Length=296, Percent_Identity=34.1216216216216, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=32.2259136212625, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=34.0080971659919, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789964, Length=286, Percent_Identity=32.5174825174825, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=31.6239316239316, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1787549, Length=295, Percent_Identity=27.1186440677966, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36836; Mature: 36705

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYEINDQLLTNEEKKELTINKNQQTISRKKEVFRKFISNPIAVLGTVTLLLIIVFSLI
CCCCCCCCHHHCCCCHHCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTSFTASEQVKEATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLLIVILLLIVMKPGLFTIIIAL
HHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKRNRKEKKHGTALIFRKRNVSR
CHHHHHCCHHHHHHCHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
GAYEINDQLLTNEEKKELTINKNQQTISRKKEVFRKFISNPIAVLGTVTLLLIIVFSLI
CCCCCCCHHHCCCCHHCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTSFTASEQVKEATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLLIVILLLIVMKPGLFTIIIAL
HHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKRNRKEKKHGTALIFRKRNVSR
CHHHHHCCHHHHHHCHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]