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The map label for this gene is ykkA [H]

Identifier: 218235126

GI number: 218235126

Start: 2811206

End: 2811730

Strand: Reverse

Name: ykkA [H]

Synonym: BCB4264_A2942

Alternate gene names: 218235126

Gene position: 2811730-2811206 (Counterclockwise)

Preceding gene: 218235692

Following gene: 218232663

Centisome position: 51.89

GC content: 34.29

Gene sequence:

>525_bases
ATGAAAGATCTCCATTTAGAAAGAAAAATGGACCCTCAAGTAGCGATTTTGTATGCGATGGTTGCTGATACGTTTAATAG
ATTGCAAAGGTTAGTCGAAGGTACTGAAGAGAACGAACTATCCTATAAAGGGTCTGAAAATAATGAAAATAGTATTGGGC
AGTTACTTCAGCATTTAGCAGTTGTTGATTTACATTGGGTGTATCGTTTCAAGGGAGAAGATGTTCCGCCAGCATTTGAA
AATAAATATGGTCCTATGTTAAATGAAGTAGGAGAATTACCAAGTTTAAGAAAAAACACATTGCAAGAGTTAATGCAAGA
TTATGAAGCAGTGCAAAAATTGTTTTATGAAGAATGTATGAAACTAACAGAAACTGATTTAACGCGGGAAGTTTTGTATG
AAAAAGGGGAAACCGCGACAATAAGATGGGGAATATGGCATATAGCAGATCATAATCGGTATCATCAAGCCCATATAAGT
CGATTGAAGAAATTATACAGAGAATATAAACTACATATTCTTTAA

Upstream 100 bases:

>100_bases
ATTTAAAACATACGGAATTGAAAAAAGGGCTATAAAAATGAATGGTGTGTATAGTGATGATGAGCATATGGTGTTGTTCT
TTTAAGAGAGGAAGTTTTGT

Downstream 100 bases:

>100_bases
TTTTTTAATGAACGAACGCCCCTAAATAATAATTAAAGGAGGCGTTTGTTTTTATTCGTTCGCTTTTCTTCCCAAGCTAT
CATTAAATTTTTATGATAAT

Product: YkkA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKDLHLERKMDPQVAILYAMVADTFNRLQRLVEGTEENELSYKGSENNENSIGQLLQHLAVVDLHWVYRFKGEDVPPAFE
NKYGPMLNEVGELPSLRKNTLQELMQDYEAVQKLFYEECMKLTETDLTREVLYEKGETATIRWGIWHIADHNRYHQAHIS
RLKKLYREYKLHIL

Sequences:

>Translated_174_residues
MKDLHLERKMDPQVAILYAMVADTFNRLQRLVEGTEENELSYKGSENNENSIGQLLQHLAVVDLHWVYRFKGEDVPPAFE
NKYGPMLNEVGELPSLRKNTLQELMQDYEAVQKLFYEECMKLTETDLTREVLYEKGETATIRWGIWHIADHNRYHQAHIS
RLKKLYREYKLHIL
>Mature_174_residues
MKDLHLERKMDPQVAILYAMVADTFNRLQRLVEGTEENELSYKGSENNENSIGQLLQHLAVVDLHWVYRFKGEDVPPAFE
NKYGPMLNEVGELPSLRKNTLQELMQDYEAVQKLFYEECMKLTETDLTREVLYEKGETATIRWGIWHIADHNRYHQAHIS
RLKKLYREYKLHIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007061 [H]

Pfam domain/function: PF04978 DUF664 [H]

EC number: NA

Molecular weight: Translated: 20652; Mature: 20652

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLHLERKMDPQVAILYAMVADTFNRLQRLVEGTEENELSYKGSENNENSIGQLLQHLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VVDLHWVYRFKGEDVPPAFENKYGPMLNEVGELPSLRKNTLQELMQDYEAVQKLFYEECM
HHHHHHHHEECCCCCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLTETDLTREVLYEKGETATIRWGIWHIADHNRYHQAHISRLKKLYREYKLHIL
HHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDLHLERKMDPQVAILYAMVADTFNRLQRLVEGTEENELSYKGSENNENSIGQLLQHLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VVDLHWVYRFKGEDVPPAFENKYGPMLNEVGELPSLRKNTLQELMQDYEAVQKLFYEECM
HHHHHHHHEECCCCCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLTETDLTREVLYEKGETATIRWGIWHIADHNRYHQAHISRLKKLYREYKLHIL
HHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]