Click here to switch to the map view.

The map label for this gene is yqjV [H]

Identifier: 218235098

GI number: 218235098

Start: 3646910

End: 3648148

Strand: Reverse

Name: yqjV [H]

Synonym: BCB4264_A3730

Alternate gene names: 218235098

Gene position: 3648148-3646910 (Counterclockwise)

Preceding gene: 218231795

Following gene: 218235451

Centisome position: 67.32

GC content: 35.59

Gene sequence:

>1239_bases
ATGAAGGGGAAGCTACAGCATATTCATCCGCTTGGAATGAGTATTATTTTAGGGACATTGTTTGCTAGGTTTGCAACTTC
AATGAGTATCCCTTTTTTAGCGATTTATTTAACGACTGTTAAAGGTGTATCAGCTGGAATGACTGGTGCTATTATCGGAA
CGAGTGCACTTGTTGGTGTTTTTGCTAGTTTTATCGGAGGGAATTTATCAGATCGATTTGGCCGGAAAACAATTATGCTC
TGGTCCATGATCGTTTGGATTTTTGTGTTTATAGGTTTTTCACTTGCGGATCATGTTTTAAGTTTCTTTTTATTAAACGC
TTTAAATGGATTATGTAGGTCGTTTTTTGAGCCAACATCAAGAGCATTATTATCAGATTTAACAAAGCCTGAGTATCGGT
TACTCGTCTATAACTTACGATACGGTGCAATAAATGTTGGAGTTGCTATTGGACCAATTGTTGGATTACAGATTGGAAGT
GCAAAATCAACAATTCCTTTTTTAGTAGCAGCTGGGGTATATATTCTATATACAGCTATATTAGCGTTCCAATTTAAGAA
GTATCCAATGGAAAAAAAGAAAGTGAGTACAGAAAAACCTGTTACAATGTTAAATGCAATGCGTATATTGCGAAAAGATA
TAGTATTTTTAGTTGCTTTAGTCGGTATTATTTTGAGTAATTGCGGTTTTTCACATTTAACGACGACAGTATCTCAATAT
TTTGCAAATGCACATATATTTGAGGATGGGGTGAAGCTATTCTCATATATGCTCGCTTTAAATGCAATTGTTGTAGTGAT
TATCCAATACCCTGTTATTCAAATGTGCAAAAAGTATACACCGTTAACATCCATTATGGTTGGGACTTTATTTGTGAGCG
GGGGATTATTTGGCTTTGGAATAGTAGAATCTATGCTAGGTGCTGCCGTTTGTACAATTATTTTTACAATTGGAGAAGTC
TTAATGTTTTCGATGACGGATGTATTTATTGATGATATTGCTGTTGCGCATCTAAAAGGAACATACTTCGGTGCGATGGG
CTTTTCGGGAATTGGAGCAGTAATAGGTCCGTGGTTTGGAGGAGTACTTCTCGATTACTACGGGTACCAAAATGGGTTTG
CAGTATTTTCAGCACTAGCTATATTTTCAACTGTGGCATTTCCTGTGCTTTTAGTTACAAAAGGTTTATCGAAAAAAAGA
TATGATAGAAATTCTAATATAGAAATGCATGCGAAATAA

Upstream 100 bases:

>100_bases
AGAACAACTCGGGTATCAACAGCTCAAGTATAGAAAAAGGAAAAGAAAGCAGATCCTTTGCTTTCTTTTTTTTGTGAAAA
TAGAGAGAGTAGGTTTAACG

Downstream 100 bases:

>100_bases
CATAAGCCCCAGTAACCAACTGGGGCTTAGTGTGTATTATATTAACTCTTAATTTGAAAAAAGAACTTTCATTTCATGCT
TATCAGCAACTTCATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKGKLQHIHPLGMSIILGTLFARFATSMSIPFLAIYLTTVKGVSAGMTGAIIGTSALVGVFASFIGGNLSDRFGRKTIML
WSMIVWIFVFIGFSLADHVLSFFLLNALNGLCRSFFEPTSRALLSDLTKPEYRLLVYNLRYGAINVGVAIGPIVGLQIGS
AKSTIPFLVAAGVYILYTAILAFQFKKYPMEKKKVSTEKPVTMLNAMRILRKDIVFLVALVGIILSNCGFSHLTTTVSQY
FANAHIFEDGVKLFSYMLALNAIVVVIIQYPVIQMCKKYTPLTSIMVGTLFVSGGLFGFGIVESMLGAAVCTIIFTIGEV
LMFSMTDVFIDDIAVAHLKGTYFGAMGFSGIGAVIGPWFGGVLLDYYGYQNGFAVFSALAIFSTVAFPVLLVTKGLSKKR
YDRNSNIEMHAK

Sequences:

>Translated_412_residues
MKGKLQHIHPLGMSIILGTLFARFATSMSIPFLAIYLTTVKGVSAGMTGAIIGTSALVGVFASFIGGNLSDRFGRKTIML
WSMIVWIFVFIGFSLADHVLSFFLLNALNGLCRSFFEPTSRALLSDLTKPEYRLLVYNLRYGAINVGVAIGPIVGLQIGS
AKSTIPFLVAAGVYILYTAILAFQFKKYPMEKKKVSTEKPVTMLNAMRILRKDIVFLVALVGIILSNCGFSHLTTTVSQY
FANAHIFEDGVKLFSYMLALNAIVVVIIQYPVIQMCKKYTPLTSIMVGTLFVSGGLFGFGIVESMLGAAVCTIIFTIGEV
LMFSMTDVFIDDIAVAHLKGTYFGAMGFSGIGAVIGPWFGGVLLDYYGYQNGFAVFSALAIFSTVAFPVLLVTKGLSKKR
YDRNSNIEMHAK
>Mature_412_residues
MKGKLQHIHPLGMSIILGTLFARFATSMSIPFLAIYLTTVKGVSAGMTGAIIGTSALVGVFASFIGGNLSDRFGRKTIML
WSMIVWIFVFIGFSLADHVLSFFLLNALNGLCRSFFEPTSRALLSDLTKPEYRLLVYNLRYGAINVGVAIGPIVGLQIGS
AKSTIPFLVAAGVYILYTAILAFQFKKYPMEKKKVSTEKPVTMLNAMRILRKDIVFLVALVGIILSNCGFSHLTTTVSQY
FANAHIFEDGVKLFSYMLALNAIVVVIIQYPVIQMCKKYTPLTSIMVGTLFVSGGLFGFGIVESMLGAAVCTIIFTIGEV
LMFSMTDVFIDDIAVAHLKGTYFGAMGFSGIGAVIGPWFGGVLLDYYGYQNGFAVFSALAIFSTVAFPVLLVTKGLSKKR
YDRNSNIEMHAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI1787815, Length=379, Percent_Identity=25.065963060686, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87081828, Length=325, Percent_Identity=22.1538461538462, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44858; Mature: 44858

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKLQHIHPLGMSIILGTLFARFATSMSIPFLAIYLTTVKGVSAGMTGAIIGTSALVGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FASFIGGNLSDRFGRKTIMLWSMIVWIFVFIGFSLADHVLSFFLLNALNGLCRSFFEPTS
HHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RALLSDLTKPEYRLLVYNLRYGAINVGVAIGPIVGLQIGSAKSTIPFLVAAGVYILYTAI
HHHHHHCCCCCEEEEEEEEEECCEEECHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
LAFQFKKYPMEKKKVSTEKPVTMLNAMRILRKDIVFLVALVGIILSNCGFSHLTTTVSQY
HHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FANAHIFEDGVKLFSYMLALNAIVVVIIQYPVIQMCKKYTPLTSIMVGTLFVSGGLFGFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
IVESMLGAAVCTIIFTIGEVLMFSMTDVFIDDIAVAHLKGTYFGAMGFSGIGAVIGPWFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
GVLLDYYGYQNGFAVFSALAIFSTVAFPVLLVTKGLSKKRYDRNSNIEMHAK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECC
>Mature Secondary Structure
MKGKLQHIHPLGMSIILGTLFARFATSMSIPFLAIYLTTVKGVSAGMTGAIIGTSALVGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FASFIGGNLSDRFGRKTIMLWSMIVWIFVFIGFSLADHVLSFFLLNALNGLCRSFFEPTS
HHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RALLSDLTKPEYRLLVYNLRYGAINVGVAIGPIVGLQIGSAKSTIPFLVAAGVYILYTAI
HHHHHHCCCCCEEEEEEEEEECCEEECHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
LAFQFKKYPMEKKKVSTEKPVTMLNAMRILRKDIVFLVALVGIILSNCGFSHLTTTVSQY
HHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FANAHIFEDGVKLFSYMLALNAIVVVIIQYPVIQMCKKYTPLTSIMVGTLFVSGGLFGFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
IVESMLGAAVCTIIFTIGEVLMFSMTDVFIDDIAVAHLKGTYFGAMGFSGIGAVIGPWFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
GVLLDYYGYQNGFAVFSALAIFSTVAFPVLLVTKGLSKKRYDRNSNIEMHAK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]