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The map label for this gene is yrhO [H]

Identifier: 218234988

GI number: 218234988

Start: 1654052

End: 1654888

Strand: Direct

Name: yrhO [H]

Synonym: BCB4264_A1740

Alternate gene names: 218234988

Gene position: 1654052-1654888 (Clockwise)

Preceding gene: 218231311

Following gene: 218232547

Centisome position: 30.52

GC content: 36.8

Gene sequence:

>837_bases
ATGGATGAAATTATAAAGGAGTTACAAAAGTTAGGATTTTCCCTGTATGAATGTAAAGCGTATATTGGACTACTAAAACA
TTCGCCAGTAACGGGCTATGAAGTGAGTAAACAAACAGGAGTACCTCGTTCTATGATTTACGAGGTACTCGGTAAGTTAA
TGGATAAAGGAGCGGTGCATATTGTACCCTCTGAACCAGTTAAATATGTACCAGTACCAGCTACCGAATTAATGAATCGA
ATGCGAAAAGACTTTGAAAAGTCCTTTGAATTTTTAGATGAGAAATTAAATTGTTTAGAACAAGAGCGACAAATAGATGT
AATTTCGCATATTCGTTCAAATGATCGTGTTTTAAAAGAGATATGCAATATAATTAATAGGGCAAAGGAAGAGTTATGGA
TTTCTGTATGGGAAGATCAAGTGCATGAAATTGAGCCATACATTCATCAAAAGGAAGAGGAAGGCGTACATATATTTTCA
ATCTTATTTGGAGCTCCAGAAACAAAAATAGGAGCGACGTTTCACCATAATTATATGACGCCCCACGTTGTTGAAAAGAG
AATGGGTGGTCATTTAACTGTTATTGCTCGTGATGGAGAGGAGGTATTAATTGCGAACTTTTCAAATGATAGCACTTCAT
GGGCCGTTACAACGTATGACCCAGCGCTAGTTCTCGTTGCTACAGAGTATGTGCGGCACGATATTATGGTTGAAGAAATC
ACAAAGGAATTTGGAGCTGATAAGTTAGATACGTTATGGCGTGAAAATATAGATTTAGTTCATGTCGTAACAGGAAAACG
AACTTTAGAAGGAATAGAGGATGATAGAGATGAGTAA

Upstream 100 bases:

>100_bases
CGAGTGAAATAGGAACACTTGTTATTGATAAAGTAAAAAGTAAAGGGAAGCAAAATCGTCGTTTTGAAGTAAGGGCGATT
TAGATTGTGAGGGGTTACCG

Downstream 100 bases:

>100_bases
AGCTGAGGCACATGTAGCTTTGCAGAGCGACGATACATTTCAGCAAGGAGTAAAAGATTGTTTACCAACTGTATTTGGTT
ATTTGAGCATCGGTATAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDEIIKELQKLGFSLYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVHIVPSEPVKYVPVPATELMNR
MRKDFEKSFEFLDEKLNCLEQERQIDVISHIRSNDRVLKEICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFS
ILFGAPETKIGATFHHNYMTPHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
TKEFGADKLDTLWRENIDLVHVVTGKRTLEGIEDDRDE

Sequences:

>Translated_278_residues
MDEIIKELQKLGFSLYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVHIVPSEPVKYVPVPATELMNR
MRKDFEKSFEFLDEKLNCLEQERQIDVISHIRSNDRVLKEICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFS
ILFGAPETKIGATFHHNYMTPHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
TKEFGADKLDTLWRENIDLVHVVTGKRTLEGIEDDRDE
>Mature_278_residues
MDEIIKELQKLGFSLYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVHIVPSEPVKYVPVPATELMNR
MRKDFEKSFEFLDEKLNCLEQERQIDVISHIRSNDRVLKEICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFS
ILFGAPETKIGATFHHNYMTPHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
TKEFGADKLDTLWRENIDLVHVVTGKRTLEGIEDDRDE

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 32038; Mature: 32038

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIIKELQKLGFSLYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVH
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCEE
IVPSEPVKYVPVPATELMNRMRKDFEKSFEFLDEKLNCLEQERQIDVISHIRSNDRVLKE
EECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFSILFGAPETKIGATFHHNYMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCC
PHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
HHHHHHHCCCEEEEEEECCCEEEEEEECCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHH
TKEFGADKLDTLWRENIDLVHVVTGKRTLEGIEDDRDE
HHHHCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCCCC
>Mature Secondary Structure
MDEIIKELQKLGFSLYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVH
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCEE
IVPSEPVKYVPVPATELMNRMRKDFEKSFEFLDEKLNCLEQERQIDVISHIRSNDRVLKE
EECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFSILFGAPETKIGATFHHNYMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCC
PHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
HHHHHHHCCCEEEEEEECCCEEEEEEECCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHH
TKEFGADKLDTLWRENIDLVHVVTGKRTLEGIEDDRDE
HHHHCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]