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The map label for this gene is flhF [H]

Identifier: 218234981

GI number: 218234981

Start: 1651080

End: 1652390

Strand: Direct

Name: flhF [H]

Synonym: BCB4264_A1737

Alternate gene names: 218234981

Gene position: 1651080-1652390 (Clockwise)

Preceding gene: 218234605

Following gene: 218235496

Centisome position: 30.47

GC content: 34.17

Gene sequence:

>1311_bases
ATGGAAAGTACAGAAAAGAAAGAAGCGTTAATGCGAATAAAAGCAGCTTCGAAAAATGAATTGTATCGAAAGTTATTTGA
CCAATATGGTACAGATTATTATTACGTTGTCGATGAAAGTGTAAAACGAAATATACCGTTTTTTTGGAAAAAGGATTATG
AAATGTTAGTTGCTTTTCCAGAAGAAAAACAGGAAGAAGTGAATGAAGGTACAGCTCAATTTCATGAACAGTTAATGGAT
GTTGTGAATGATCCTTCAGAACAAATTGTGAAGGCGAATGGAATTCAATCAGTACTGCACAATTTAGAAAATGTAACGAC
TCCTATGTCATACGCGGCGATGCAAACAGGAAATAGTGAAGAATGGGCAAGAAAAAAAGAGAAACTATTAAAGCTGTTTG
AAAAAGGAATTGTCGTGGTGAAACAGACGAAAGAAACGGAAGTAACGAAAAAGAAAAAAGTTGTGAAACAAGTCGTTCCA
CTAAAGAAAGAAGAAGTGGTTACAAAGAAAGAAAACCAAGAATCTGTACCGTTTATTATTCAAAAAGTAATTCGGATGCT
AGAACAAAACGATGTGGAACAATATTTCATTTATGCATATGCTGAAAAGTTAAAAATAAAGTTTGAAAATGCAACGATGA
TTACGGAAGAAGAAGTTATCAGGTACATATTGGAAGATATGAAATCTCATTTCAATACGGAAAACGTCTTTGAAAAAGAA
GTACAAACAATTGCATTAATCGGTCCAACTGGCGTTGGTAAAACGACGACACTGGCGAAAATGGCATGGCAATTTCACGG
TAAGAACAAAACAGTTGGTTTTATAACGACAGATCATTCGCGCATAGGGACAGTGCAGCAATTGCAAGATAACGTAAAGA
CAATTGGATCGGAAGTAATTGCTGTGCGTGATGAAGCTGCAATGACAAGAGCGCTTACGTATTTTAAAGAAGAAGCACGC
GTCGATTATATTTTAATTGATACAGCTGGAAAAAATTATCGTACGTCAGAAACAGTAGAAGAAATGATTGAAACGATGGG
ACAAGTAGAACCAGATTATATTTGTTTAACGTTATCAGCTTCAATGAAAAGTAAAGATATGATTGAAATCATTACAAACT
TTAAAGATATTCATATAGATGGTATTGTGTTTACAAAATTTGATGAAACAGCAAGTAGTGGCGAATTGTTGAAAATTCCA
GCAGTATCATCAGCTCCTATTGTATTAATGACAGATGGCCAAGACATAAAGAAAAATATACATATCGCTACAGCTGAACA
TTTAGCAAAACAAATGTTACAAACATCGTAG

Upstream 100 bases:

>100_bases
AACGTTATCAAGTGGAAGCACAAGTACTTTGTATTAGCGAATTAGCACCAGAAATTGTTGTGGATCAAATTGCCTATATT
GAATAGTAGGGGGTGAAGTA

Downstream 100 bases:

>100_bases
AAAAGAGGTGAAGAATAAGGCGCTTGCCTTATTCAAACGAATATGAACGGTCTTTATATAGGTTCTATGGGCATGATGAA
TTACATGCAGCGCATTAATG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MESTEKKEALMRIKAASKNELYRKLFDQYGTDYYYVVDESVKRNIPFFWKKDYEMLVAFPEEKQEEVNEGTAQFHEQLMD
VVNDPSEQIVKANGIQSVLHNLENVTTPMSYAAMQTGNSEEWARKKEKLLKLFEKGIVVVKQTKETEVTKKKKVVKQVVP
LKKEEVVTKKENQESVPFIIQKVIRMLEQNDVEQYFIYAYAEKLKIKFENATMITEEEVIRYILEDMKSHFNTENVFEKE
VQTIALIGPTGVGKTTTLAKMAWQFHGKNKTVGFITTDHSRIGTVQQLQDNVKTIGSEVIAVRDEAAMTRALTYFKEEAR
VDYILIDTAGKNYRTSETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFTKFDETASSGELLKIP
AVSSAPIVLMTDGQDIKKNIHIATAEHLAKQMLQTS

Sequences:

>Translated_436_residues
MESTEKKEALMRIKAASKNELYRKLFDQYGTDYYYVVDESVKRNIPFFWKKDYEMLVAFPEEKQEEVNEGTAQFHEQLMD
VVNDPSEQIVKANGIQSVLHNLENVTTPMSYAAMQTGNSEEWARKKEKLLKLFEKGIVVVKQTKETEVTKKKKVVKQVVP
LKKEEVVTKKENQESVPFIIQKVIRMLEQNDVEQYFIYAYAEKLKIKFENATMITEEEVIRYILEDMKSHFNTENVFEKE
VQTIALIGPTGVGKTTTLAKMAWQFHGKNKTVGFITTDHSRIGTVQQLQDNVKTIGSEVIAVRDEAAMTRALTYFKEEAR
VDYILIDTAGKNYRTSETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFTKFDETASSGELLKIP
AVSSAPIVLMTDGQDIKKNIHIATAEHLAKQMLQTS
>Mature_436_residues
MESTEKKEALMRIKAASKNELYRKLFDQYGTDYYYVVDESVKRNIPFFWKKDYEMLVAFPEEKQEEVNEGTAQFHEQLMD
VVNDPSEQIVKANGIQSVLHNLENVTTPMSYAAMQTGNSEEWARKKEKLLKLFEKGIVVVKQTKETEVTKKKKVVKQVVP
LKKEEVVTKKENQESVPFIIQKVIRMLEQNDVEQYFIYAYAEKLKIKFENATMITEEEVIRYILEDMKSHFNTENVFEKE
VQTIALIGPTGVGKTTTLAKMAWQFHGKNKTVGFITTDHSRIGTVQQLQDNVKTIGSEVIAVRDEAAMTRALTYFKEEAR
VDYILIDTAGKNYRTSETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFTKFDETASSGELLKIP
AVSSAPIVLMTDGQDIKKNIHIATAEHLAKQMLQTS

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=183, Percent_Identity=27.3224043715847, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI226371618, Length=183, Percent_Identity=27.3224043715847, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789874, Length=194, Percent_Identity=28.3505154639175, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17539958, Length=178, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325345, Length=185, Percent_Identity=26.4864864864865, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17647949, Length=284, Percent_Identity=22.5352112676056, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 49941; Mature: 49941

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTEKKEALMRIKAASKNELYRKLFDQYGTDYYYVVDESVKRNIPFFWKKDYEMLVAFP
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCEEECCCCEEEEECC
EEKQEEVNEGTAQFHEQLMDVVNDPSEQIVKANGIQSVLHNLENVTTPMSYAAMQTGNSE
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCH
EWARKKEKLLKLFEKGIVVVKQTKETEVTKKKKVVKQVVPLKKEEVVTKKENQESVPFII
HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHH
QKVIRMLEQNDVEQYFIYAYAEKLKIKFENATMITEEEVIRYILEDMKSHFNTENVFEKE
HHHHHHHHHCCHHHHHHHHEEEHHEEEECCCEECCHHHHHHHHHHHHHHHCCCHHHHHHH
VQTIALIGPTGVGKTTTLAKMAWQFHGKNKTVGFITTDHSRIGTVQQLQDNVKTIGSEVI
HHEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHHE
AVRDEAAMTRALTYFKEEARVDYILIDTAGKNYRTSETVEEMIETMGQVEPDYICLTLSA
EECHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC
SMKSKDMIEIITNFKDIHIDGIVFTKFDETASSGELLKIPAVSSAPIVLMTDGQDIKKNI
CCCCCHHHHHHHCCCCEEECEEEEEECCCCCCCCCEEEECCCCCCCEEEEECCHHHHHCE
HIATAEHLAKQMLQTS
EEEHHHHHHHHHHHCC
>Mature Secondary Structure
MESTEKKEALMRIKAASKNELYRKLFDQYGTDYYYVVDESVKRNIPFFWKKDYEMLVAFP
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCEEECCCCEEEEECC
EEKQEEVNEGTAQFHEQLMDVVNDPSEQIVKANGIQSVLHNLENVTTPMSYAAMQTGNSE
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCH
EWARKKEKLLKLFEKGIVVVKQTKETEVTKKKKVVKQVVPLKKEEVVTKKENQESVPFII
HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHH
QKVIRMLEQNDVEQYFIYAYAEKLKIKFENATMITEEEVIRYILEDMKSHFNTENVFEKE
HHHHHHHHHCCHHHHHHHHEEEHHEEEECCCEECCHHHHHHHHHHHHHHHCCCHHHHHHH
VQTIALIGPTGVGKTTTLAKMAWQFHGKNKTVGFITTDHSRIGTVQQLQDNVKTIGSEVI
HHEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHHE
AVRDEAAMTRALTYFKEEARVDYILIDTAGKNYRTSETVEEMIETMGQVEPDYICLTLSA
EECHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC
SMKSKDMIEIITNFKDIHIDGIVFTKFDETASSGELLKIPAVSSAPIVLMTDGQDIKKNI
CCCCCHHHHHHHCCCCEEECEEEEEECCCCCCCCCEEEECCCCCCCEEEEECCHHHHHCE
HIATAEHLAKQMLQTS
EEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]