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The map label for this gene is gerLC [H]

Identifier: 218234948

GI number: 218234948

Start: 739052

End: 740194

Strand: Direct

Name: gerLC [H]

Synonym: BCB4264_A0745

Alternate gene names: 218234948

Gene position: 739052-740194 (Clockwise)

Preceding gene: 218231637

Following gene: 218235915

Centisome position: 13.64

GC content: 34.21

Gene sequence:

>1143_bases
ATGGTTATGGCTTTAACTGGATTTATGAGTGGGTGTTCTGAGTTAGAAGAGATAGAAGAAAGAGGATTTGTAGTAGGAGC
GGCTTACGATATTGTGAAGGAGAAGAAAGCGAATCCAATTATGAAAGGGACCTATCAGATGGTACTCCCCAGTAAATTGT
CTCAACAGGGTGGACAAGGGGGTGGGGATAGCGAAAATTATATTAATGTTAGTGCAAAAGCAGATAGTGTATTTGAACAA
ATAAGAATAATCGCCAAAAAAATTAGTCGTACATTATTTTTCCCTCATATACAGGTGATTATTTTCTCTGAAGAATTACT
TTCACATCCATACATTTTACAAAATACGTTAGATGTATATATTCGCGATCATGAGATGAGAAGAAATATTCGTTTGTTCG
TTTCTAATAAAAATGCCGAAGCTATTTTAAAACAAAGTGCCAAGCCTGAAAATTTACCGGCGCAGTATATTGATATGTTA
GCTGAACACCCTCCGAAAAATGCCCAAATGATTGAGGCTGCAAGAATTGGTGAGGTGCAGGAAAAGATGATCTCTAACCG
AAGTTTTGTATTACCTATTCTGGAACTAACAAAACAAGGAGTACAAATGAACGGTGCAGCATTGTTTCGTGGAAAGGATA
ATAAGTGTGTAGGCAATTTGAGTGGGGAAGAAACAGTAGGGATGAATTATATAATAGGTAAAAAAATTGGAGGTTTTTTT
ACCATCCGTAAAAAGAATCAACTTATTACATATGAAATTCATAAGTTACGTCGAAAAATTAAAGTATCCACAACGAATGC
TACAAAACCGAAATTTAATATTCATTTATTTCTGGAAGGTACAATAGCTGAGTTGCACTTTAGTGATCATAAAAAGGTTT
TGAATGAAAAGAGTTTAGAGAAGGATATATCGGAAGAAATGGAGGAGCGTATTCAAAAATCGATTAAGCTTGTTCAAAAA
AAATATAAGGTAGATGTATTAGAGTTAGGGGAAGTGTATAAGCGACATAATTATAAAGAATGGACAAAAATAAGTAAGAA
TTGGGATCAAGGCGAAAATTACTTTAGTAATGCTGAAATTACTGTTCATGTTCATCCAACAATTGAACATTCAGGTTCAG
CTTTACCGAAAAGAGTGAAATAA

Upstream 100 bases:

>100_bases
ATAGATATGGGGTTTGTTTTGTTAGCTCCTTTGCTCGTTTTGATTGTATATAAAATAAAAAGAAGGAATGGTGGAAATGA
AACACCTTCTTAAAATTATA

Downstream 100 bases:

>100_bases
GGTGATGAAAGTTGTTTACTGGATTAGGAATTAGTTGCACGATATTAATGGCAGTTCTTCCAGGAACTATATATTTTATT
CATAAAAAACTCACAACGTA

Product: spore germination protein GerLC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MVMALTGFMSGCSELEEIEERGFVVGAAYDIVKEKKANPIMKGTYQMVLPSKLSQQGGQGGGDSENYINVSAKADSVFEQ
IRIIAKKISRTLFFPHIQVIIFSEELLSHPYILQNTLDVYIRDHEMRRNIRLFVSNKNAEAILKQSAKPENLPAQYIDML
AEHPPKNAQMIEAARIGEVQEKMISNRSFVLPILELTKQGVQMNGAALFRGKDNKCVGNLSGEETVGMNYIIGKKIGGFF
TIRKKNQLITYEIHKLRRKIKVSTTNATKPKFNIHLFLEGTIAELHFSDHKKVLNEKSLEKDISEEMEERIQKSIKLVQK
KYKVDVLELGEVYKRHNYKEWTKISKNWDQGENYFSNAEITVHVHPTIEHSGSALPKRVK

Sequences:

>Translated_380_residues
MVMALTGFMSGCSELEEIEERGFVVGAAYDIVKEKKANPIMKGTYQMVLPSKLSQQGGQGGGDSENYINVSAKADSVFEQ
IRIIAKKISRTLFFPHIQVIIFSEELLSHPYILQNTLDVYIRDHEMRRNIRLFVSNKNAEAILKQSAKPENLPAQYIDML
AEHPPKNAQMIEAARIGEVQEKMISNRSFVLPILELTKQGVQMNGAALFRGKDNKCVGNLSGEETVGMNYIIGKKIGGFF
TIRKKNQLITYEIHKLRRKIKVSTTNATKPKFNIHLFLEGTIAELHFSDHKKVLNEKSLEKDISEEMEERIQKSIKLVQK
KYKVDVLELGEVYKRHNYKEWTKISKNWDQGENYFSNAEITVHVHPTIEHSGSALPKRVK
>Mature_380_residues
MVMALTGFMSGCSELEEIEERGFVVGAAYDIVKEKKANPIMKGTYQMVLPSKLSQQGGQGGGDSENYINVSAKADSVFEQ
IRIIAKKISRTLFFPHIQVIIFSEELLSHPYILQNTLDVYIRDHEMRRNIRLFVSNKNAEAILKQSAKPENLPAQYIDML
AEHPPKNAQMIEAARIGEVQEKMISNRSFVLPILELTKQGVQMNGAALFRGKDNKCVGNLSGEETVGMNYIIGKKIGGFF
TIRKKNQLITYEIHKLRRKIKVSTTNATKPKFNIHLFLEGTIAELHFSDHKKVLNEKSLEKDISEEMEERIQKSIKLVQK
KYKVDVLELGEVYKRHNYKEWTKISKNWDQGENYFSNAEITVHVHPTIEHSGSALPKRVK

Specific function: Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimulate germination in the absence of gerD and gerK gene products (fructose and glucose re

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 43338; Mature: 43338

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMALTGFMSGCSELEEIEERGFVVGAAYDIVKEKKANPIMKGTYQMVLPSKLSQQGGQG
CEEEEHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHEECCHHHHHCCCCC
GGDSENYINVSAKADSVFEQIRIIAKKISRTLFFPHIQVIIFSEELLSHPYILQNTLDVY
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCEEECCCEEEE
IRDHEMRRNIRLFVSNKNAEAILKQSAKPENLPAQYIDMLAEHPPKNAQMIEAARIGEVQ
EECHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
EKMISNRSFVLPILELTKQGVQMNGAALFRGKDNKCVGNLSGEETVGMNYIIGKKIGGFF
HHHHCCCCEEEHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEEECCCCCEE
TIRKKNQLITYEIHKLRRKIKVSTTNATKPKFNIHLFLEGTIAELHFSDHKKVLNEKSLE
EEECCCCEEHHHHHHHHHHEEEEECCCCCCEEEEEEEEECEEEEEEHHHHHHHHHHHHHH
KDISEEMEERIQKSIKLVQKKYKVDVLELGEVYKRHNYKEWTKISKNWDQGENYFSNAEI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCEE
TVHVHPTIEHSGSALPKRVK
EEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MVMALTGFMSGCSELEEIEERGFVVGAAYDIVKEKKANPIMKGTYQMVLPSKLSQQGGQG
CEEEEHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHEECCHHHHHCCCCC
GGDSENYINVSAKADSVFEQIRIIAKKISRTLFFPHIQVIIFSEELLSHPYILQNTLDVY
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCEEECCCEEEE
IRDHEMRRNIRLFVSNKNAEAILKQSAKPENLPAQYIDMLAEHPPKNAQMIEAARIGEVQ
EECHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
EKMISNRSFVLPILELTKQGVQMNGAALFRGKDNKCVGNLSGEETVGMNYIIGKKIGGFF
HHHHCCCCEEEHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEEECCCCCEE
TIRKKNQLITYEIHKLRRKIKVSTTNATKPKFNIHLFLEGTIAELHFSDHKKVLNEKSLE
EEECCCCEEHHHHHHHHHHEEEEECCCCCCEEEEEEEEECEEEEEEHHHHHHHHHHHHHH
KDISEEMEERIQKSIKLVQKKYKVDVLELGEVYKRHNYKEWTKISKNWDQGENYFSNAEI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCEE
TVHVHPTIEHSGSALPKRVK
EEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377 [H]