| Definition | Bacillus cereus B4264, complete genome. |
|---|---|
| Accession | NC_011725 |
| Length | 5,419,036 |
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The map label for this gene is lytB [H]
Identifier: 218234871
GI number: 218234871
Start: 904565
End: 906427
Strand: Direct
Name: lytB [H]
Synonym: BCB4264_A0933
Alternate gene names: 218234871
Gene position: 904565-906427 (Clockwise)
Preceding gene: 218235453
Following gene: 218233584
Centisome position: 16.69
GC content: 33.98
Gene sequence:
>1863_bases TTGAAGACTTTTTCAAAAGGTATAACAGCAGTGGCATTAACGGGATCATTACTTTTAACTCCTATTTCAAGTTATGCGGC AAATGATGATATTACAGGACATATGTTTGAGACGAATATGCGCTCACTTATTACTAAAGGAGTTTTAATGGGGTATGGAG ACAATGTATATGCGCCTGATAAATTAGTAACAAGAGCAGAGTTTGCTACATTCATAGCGAGGGCTTTAAATTTACCGAAA GCTGATTCGAATTTCGAGGATGTGCCGAAGACTTACGGTTTATATGATGGTGTAAGTAGAGCATATGGAGCGAAAATTAT TAATGGTCGTACGAACGAGACGTTCTCACCAAATGATGTGATTACACGTGAAGAAATGTCGATCATGGTAAAGCGAGCGT TAGACTATAAAAATATTAAAGTAGCTGTAAGTCCGCTTACCTTTACTGATAAAGATAGTATTAACTATAAAGAACATGTG CAAGTTATGGTGGCTACTCAAATTATTAAAGGGTATCCAGAAGATAATACATTTAGACCACATTTATCAGCTACAAGAGG GATGGCTTCAGCTATGTTGGATCGCATGCTTCAGACGATTGAAAAAAACGGAAATAGCAATCCTGTAGAAACTAAGAAAT ATGTCGTGACAAATGTAAGAGAAAACGGAACAGAGCAAGAAGTAGAGCGCTATAATACGTATAAAGAAGCGGTTACCGCT GCTCAAAATAAAGGTATGAATGCGGTAAAATACGAGAACGAATTTTTATGGATTAAAGATGGTTTTGCAAGTGCGAAAAG AATAACTGGGCAAAACATCATTAATATTTATGATGAGAATTTAGCAACAGTATATACGTATATTCAGTATGGAACAGAAT TGAAAGTGTTAGAAGTTGGCGAAGATCGTGTGAAAGTTCAACTTTCTGGTTTGACAGGTTATGTGAAGAAGAATGAAATC ACTTTAATTCCTACCAATGAAATGAAACAGTCGTCTTATTATGTGAAATCAGATGGATATTTATACCATAAATATTATAC ATATAATACAAGTTCACCTGGATATACAGAATTTAGATATGGTGTGGCACCTTCTTTCATGAAGCAAGGACAGCAAATGT ATAGTGTAGATGGAAAGACATTTGGAGACGAAACTTTCTATCAATATTTCAATTATTTATCATTACGTTCGAAAACAGAT TATACAGCTGAACAACTAGATAGTTATGTGAAATCGATTAAGCCAGACTCTCCATTAATTGGTTTAGGAAAGAAATTTAA AGAAGTAGAAAGCAAGTATAATGTAAATGCATTATTCTTATATTCATTAGCAATTCATGAAAGTTATTATGGAACAAGCG CTCTTGCAAAAGACAAAAATAATTTATTTGGTTTAAAAGCAACAGACGATAGTCCATATGGTAACGGAGAAGCATTCAAT TCAAAAGAAGATTGTATTGAACATGCAGCAAAATTATACATGAATGAAGGATATTTAAATCCAGGACATTGGCGTTATAC AGCAACATATACAGGTGATAAAGCTGCTGGTTTAAATGCGAAATATGCATCTGATGCGAACTGGGGTAAAAAAGTAGCGG GGCATATGAATCGTTTTGATTCTTATTTAGGTAAAAAAGAATACAACAAGTACAAACTTGCACGTGTGATGAATAACGTG GAAGTGAAAAAGAATCCTAGTATATCAAATGAGCGACTGTATCGTTTAAATACAAATGTAGTTGTCACAGTTACTGGTGA AGAAATAATAAATGGAAAAGCGTGGGTTAAAGTTATTTCAGATAATCCTACTGTAACAGAAGCGTATATTGCAAAAGAAA GCTTAGAATACGTAAAACATTAA
Upstream 100 bases:
>100_bases AACGTTTTATTTTAATTCCTATTTATTATGCTAAAATGATTGTGATTATTATATAATCAAATTTGTGATAATAAATTCGT AGATTACGAGGAGGATAACC
Downstream 100 bases:
>100_bases TTAAATAAAAAAGAAGGTGCTACTAATATTTCGTAGCACCTTCTTTTTATTCAATTTCAAAATCAACAATGATATAGGCG AGTATAACAACGAAGAAAAT
Product: S-layer protein
Products: NA
Alternate protein names: Murein hydrolase [H]
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MKTFSKGITAVALTGSLLLTPISSYAANDDITGHMFETNMRSLITKGVLMGYGDNVYAPDKLVTRAEFATFIARALNLPK ADSNFEDVPKTYGLYDGVSRAYGAKIINGRTNETFSPNDVITREEMSIMVKRALDYKNIKVAVSPLTFTDKDSINYKEHV QVMVATQIIKGYPEDNTFRPHLSATRGMASAMLDRMLQTIEKNGNSNPVETKKYVVTNVRENGTEQEVERYNTYKEAVTA AQNKGMNAVKYENEFLWIKDGFASAKRITGQNIINIYDENLATVYTYIQYGTELKVLEVGEDRVKVQLSGLTGYVKKNEI TLIPTNEMKQSSYYVKSDGYLYHKYYTYNTSSPGYTEFRYGVAPSFMKQGQQMYSVDGKTFGDETFYQYFNYLSLRSKTD YTAEQLDSYVKSIKPDSPLIGLGKKFKEVESKYNVNALFLYSLAIHESYYGTSALAKDKNNLFGLKATDDSPYGNGEAFN SKEDCIEHAAKLYMNEGYLNPGHWRYTATYTGDKAAGLNAKYASDANWGKKVAGHMNRFDSYLGKKEYNKYKLARVMNNV EVKKNPSISNERLYRLNTNVVVTVTGEEIINGKAWVKVISDNPTVTEAYIAKESLEYVKH
Sequences:
>Translated_620_residues MKTFSKGITAVALTGSLLLTPISSYAANDDITGHMFETNMRSLITKGVLMGYGDNVYAPDKLVTRAEFATFIARALNLPK ADSNFEDVPKTYGLYDGVSRAYGAKIINGRTNETFSPNDVITREEMSIMVKRALDYKNIKVAVSPLTFTDKDSINYKEHV QVMVATQIIKGYPEDNTFRPHLSATRGMASAMLDRMLQTIEKNGNSNPVETKKYVVTNVRENGTEQEVERYNTYKEAVTA AQNKGMNAVKYENEFLWIKDGFASAKRITGQNIINIYDENLATVYTYIQYGTELKVLEVGEDRVKVQLSGLTGYVKKNEI TLIPTNEMKQSSYYVKSDGYLYHKYYTYNTSSPGYTEFRYGVAPSFMKQGQQMYSVDGKTFGDETFYQYFNYLSLRSKTD YTAEQLDSYVKSIKPDSPLIGLGKKFKEVESKYNVNALFLYSLAIHESYYGTSALAKDKNNLFGLKATDDSPYGNGEAFN SKEDCIEHAAKLYMNEGYLNPGHWRYTATYTGDKAAGLNAKYASDANWGKKVAGHMNRFDSYLGKKEYNKYKLARVMNNV EVKKNPSISNERLYRLNTNVVVTVTGEEIINGKAWVKVISDNPTVTEAYIAKESLEYVKH >Mature_620_residues MKTFSKGITAVALTGSLLLTPISSYAANDDITGHMFETNMRSLITKGVLMGYGDNVYAPDKLVTRAEFATFIARALNLPK ADSNFEDVPKTYGLYDGVSRAYGAKIINGRTNETFSPNDVITREEMSIMVKRALDYKNIKVAVSPLTFTDKDSINYKEHV QVMVATQIIKGYPEDNTFRPHLSATRGMASAMLDRMLQTIEKNGNSNPVETKKYVVTNVRENGTEQEVERYNTYKEAVTA AQNKGMNAVKYENEFLWIKDGFASAKRITGQNIINIYDENLATVYTYIQYGTELKVLEVGEDRVKVQLSGLTGYVKKNEI TLIPTNEMKQSSYYVKSDGYLYHKYYTYNTSSPGYTEFRYGVAPSFMKQGQQMYSVDGKTFGDETFYQYFNYLSLRSKTD YTAEQLDSYVKSIKPDSPLIGLGKKFKEVESKYNVNALFLYSLAIHESYYGTSALAKDKNNLFGLKATDDSPYGNGEAFN SKEDCIEHAAKLYMNEGYLNPGHWRYTATYTGDKAAGLNAKYASDANWGKKVAGHMNRFDSYLGKKEYNKYKLARVMNNV EVKKNPSISNERLYRLNTNVVVTVTGEEIINGKAWVKVISDNPTVTEAYIAKESLEYVKH
Specific function: Plays an important role in cell wall degradation and cell separation [H]
COG id: COG4193
COG function: function code G; Beta- N-acetylglucosaminidase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 13 cell wall-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018337 - InterPro: IPR013338 - InterPro: IPR002901 [H]
Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]
EC number: =3.2.1.96 [H]
Molecular weight: Translated: 70004; Mature: 70004
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFSKGITAVALTGSLLLTPISSYAANDDITGHMFETNMRSLITKGVLMGYGDNVYAPD CCCHHHCCEEEEEECCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCH KLVTRAEFATFIARALNLPKADSNFEDVPKTYGLYDGVSRAYGAKIINGRTNETFSPNDV HHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCHHHHHHHHHCCEEECCCCCCCCCCCCC ITREEMSIMVKRALDYKNIKVAVSPLTFTDKDSINYKEHVQVMVATQIIKGYPEDNTFRP CCHHHHHHHHHHHCCCCCEEEEEECEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC HLSATRGMASAMLDRMLQTIEKNGNSNPVETKKYVVTNVRENGTEQEVERYNTYKEAVTA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH AQNKGMNAVKYENEFLWIKDGFASAKRITGQNIINIYDENLATVYTYIQYGTELKVLEVG HHHCCCCEEEECCCEEEEECCCCHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEEEEEC EDRVKVQLSGLTGYVKKNEITLIPTNEMKQSSYYVKSDGYLYHKYYTYNTSSPGYTEFRY CCEEEEEEECCEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEEEEECCCCCCCCEEEC GVAPSFMKQGQQMYSVDGKTFGDETFYQYFNYLSLRSKTDYTAEQLDSYVKSIKPDSPLI CCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE GLGKKFKEVESKYNVNALFLYSLAIHESYYGTSALAKDKNNLFGLKATDDSPYGNGEAFN CCCHHHHHHHHHCCCCEEEEEEEHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCCC SKEDCIEHAAKLYMNEGYLNPGHWRYTATYTGDKAAGLNAKYASDANWGKKVAGHMNRFD CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SYLGKKEYNKYKLARVMNNVEVKKNPSISNERLYRLNTNVVVTVTGEEIINGKAWVKVIS HHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHCCCEEEEEEC DNPTVTEAYIAKESLEYVKH CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKTFSKGITAVALTGSLLLTPISSYAANDDITGHMFETNMRSLITKGVLMGYGDNVYAPD CCCHHHCCEEEEEECCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCH KLVTRAEFATFIARALNLPKADSNFEDVPKTYGLYDGVSRAYGAKIINGRTNETFSPNDV HHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCHHHHHHHHHCCEEECCCCCCCCCCCCC ITREEMSIMVKRALDYKNIKVAVSPLTFTDKDSINYKEHVQVMVATQIIKGYPEDNTFRP CCHHHHHHHHHHHCCCCCEEEEEECEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC HLSATRGMASAMLDRMLQTIEKNGNSNPVETKKYVVTNVRENGTEQEVERYNTYKEAVTA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH AQNKGMNAVKYENEFLWIKDGFASAKRITGQNIINIYDENLATVYTYIQYGTELKVLEVG HHHCCCCEEEECCCEEEEECCCCHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEEEEEC EDRVKVQLSGLTGYVKKNEITLIPTNEMKQSSYYVKSDGYLYHKYYTYNTSSPGYTEFRY CCEEEEEEECCEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEEEEECCCCCCCCEEEC GVAPSFMKQGQQMYSVDGKTFGDETFYQYFNYLSLRSKTDYTAEQLDSYVKSIKPDSPLI CCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE GLGKKFKEVESKYNVNALFLYSLAIHESYYGTSALAKDKNNLFGLKATDDSPYGNGEAFN CCCHHHHHHHHHCCCCEEEEEEEHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCCC SKEDCIEHAAKLYMNEGYLNPGHWRYTATYTGDKAAGLNAKYASDANWGKKVAGHMNRFD CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SYLGKKEYNKYKLARVMNNVEVKKNPSISNERLYRLNTNVVVTVTGEEIINGKAWVKVIS HHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHCCCEEEEEEC DNPTVTEAYIAKESLEYVKH CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]