Click here to switch to the map view.

The map label for this gene is yvaQ [H]

Identifier: 218234788

GI number: 218234788

Start: 394578

End: 395870

Strand: Direct

Name: yvaQ [H]

Synonym: BCB4264_A0418

Alternate gene names: 218234788

Gene position: 394578-395870 (Clockwise)

Preceding gene: 218235988

Following gene: 218234041

Centisome position: 7.28

GC content: 36.19

Gene sequence:

>1293_bases
ATGGAAAAAGAAAGAAAAACATTTTCTTTTGGATTACGTACACAACTTATGCTATTCACTACAGTTTTAGCTTTCATTAC
ATATTCAACAAGTATATTTTTTATTTACGTGATATACGATTATTTTCAAAGTTATGTAAGTCAAACTGTATATAATATTA
TCGTTATGTTATTAGGGGTAGTATGGTCTGGAATTTTAGCATATGGAGCAGCCGTATTTTTAATTAAACCGCTTCGCAAG
TTAGAGGAAGCGGCAAGAAAAGCAGCTGAGGGTGATATTCGTGAAGATGTTCCATTACCGAAGACAGATGATGAAATTAA
ATCTTTAAGTGTTGCATTTAATATGATGTTAGGAAACTTAAGGGGCATGGTAAAAAATATTGATACAACATTTTCGTATA
CAAATAATCAAGTACAGCAGATTAGAAAACAAACAGGCGAAGCAACGAGACAAGCGCAAGGTGTATCGGAGACACTTGCA
GAGATTTCTTCAGGCGCTGAGCAATCAGCGGCATCAATTCAAGCAATTGTTTCTGCTGTTGATACAACGACTTCTATTGC
AAGTGAAGTAGAAGAAAAAGCGAAGCAGTCTGATACATTGTCTTCAGAAATGGTTGAAGCTTTAGGGCATAGTACTCGTG
TCTTTACGTCTTTAATTCAAGGTATTCAAACATTGGCAAAAGAAAATGAAGATTCAATGCAAAATGTACAGAAGTTAGAA
GAACGAATGAAACAAGTAGAACATATTGTGTCTGTTGTGAGTGCGATTGCTAGCCAAACGAATTTATTAGCACTAAATGC
TTCTATTGAGGCAGCTCGCGCAGGAGAGCATGGAAGAGGCTTTGCGGTTGTTGCGGAAGAAGTACGTAAACTTGCTGATG
AAAGTGATCATTCTGCAAGAAACATATCGCAGTTATTACGGAATATGCAAGATGAAGTACAACAAGTTGCAATGAAAATG
ACAGAACAAGTGAAAATAGCTAAAGAAGAGGCGAAACGTGGGGAAGCTACGGAATTAATTTTAAAAGAAATGTCATCAAG
TGTTATGGAAGTAGCCGATGCAACTCAGCAAATTAGTAGTTATATGAATGAACAAGTGAGCCACATTCATCAAACAGGAG
CACAAACAAAAGCTGTAGCAGCAATTGCTGAAGAAACGTCAGCTGGTTCGCAAGAAGTAGCACGTGTGACGCTACAACAA
TCTAAAAATATGATAGTAATCGATCAATTATTAAAGGATTTAGAGAAGCAAGCAACTGATTTGAAACAAACAATTGAACG
ATTTTCAATGTAA

Upstream 100 bases:

>100_bases
AATAATATTTTTTAAAATCTCTATATCCTTCTATAATGAAAATATGGATAATAATATATAGGTAGTATTTATATTGCTTA
TAAAAAGGGGGAAAGGGAAG

Downstream 100 bases:

>100_bases
AAGGAAGAACAGAATATTGTTCTTCTCTTTTTTATTTAGCTTGATTTAATATTTACAGTTAAACTATGAACGTTTCCGCA
ACATTCTGTTCTGTCCCTTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MEKERKTFSFGLRTQLMLFTTVLAFITYSTSIFFIYVIYDYFQSYVSQTVYNIIVMLLGVVWSGILAYGAAVFLIKPLRK
LEEAARKAAEGDIREDVPLPKTDDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTNNQVQQIRKQTGEATRQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDTLSSEMVEALGHSTRVFTSLIQGIQTLAKENEDSMQNVQKLE
ERMKQVEHIVSVVSAIASQTNLLALNASIEAARAGEHGRGFAVVAEEVRKLADESDHSARNISQLLRNMQDEVQQVAMKM
TEQVKIAKEEAKRGEATELILKEMSSSVMEVADATQQISSYMNEQVSHIHQTGAQTKAVAAIAEETSAGSQEVARVTLQQ
SKNMIVIDQLLKDLEKQATDLKQTIERFSM

Sequences:

>Translated_430_residues
MEKERKTFSFGLRTQLMLFTTVLAFITYSTSIFFIYVIYDYFQSYVSQTVYNIIVMLLGVVWSGILAYGAAVFLIKPLRK
LEEAARKAAEGDIREDVPLPKTDDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTNNQVQQIRKQTGEATRQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDTLSSEMVEALGHSTRVFTSLIQGIQTLAKENEDSMQNVQKLE
ERMKQVEHIVSVVSAIASQTNLLALNASIEAARAGEHGRGFAVVAEEVRKLADESDHSARNISQLLRNMQDEVQQVAMKM
TEQVKIAKEEAKRGEATELILKEMSSSVMEVADATQQISSYMNEQVSHIHQTGAQTKAVAAIAEETSAGSQEVARVTLQQ
SKNMIVIDQLLKDLEKQATDLKQTIERFSM
>Mature_430_residues
MEKERKTFSFGLRTQLMLFTTVLAFITYSTSIFFIYVIYDYFQSYVSQTVYNIIVMLLGVVWSGILAYGAAVFLIKPLRK
LEEAARKAAEGDIREDVPLPKTDDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTNNQVQQIRKQTGEATRQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDTLSSEMVEALGHSTRVFTSLIQGIQTLAKENEDSMQNVQKLE
ERMKQVEHIVSVVSAIASQTNLLALNASIEAARAGEHGRGFAVVAEEVRKLADESDHSARNISQLLRNMQDEVQQVAMKM
TEQVKIAKEEAKRGEATELILKEMSSSVMEVADATQQISSYMNEQVSHIHQTGAQTKAVAAIAEETSAGSQEVARVTLQQ
SKNMIVIDQLLKDLEKQATDLKQTIERFSM

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=342, Percent_Identity=28.9473684210526, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=27.3026315789474, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1787690, Length=312, Percent_Identity=26.9230769230769, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788194, Length=249, Percent_Identity=30.1204819277108, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789453, Length=339, Percent_Identity=26.2536873156342, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 47519; Mature: 47519

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]