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The map label for this gene is ycdQ [C]

Identifier: 218234686

GI number: 218234686

Start: 491792

End: 493336

Strand: Direct

Name: ycdQ [C]

Synonym: BCB4264_A0508

Alternate gene names: 218234686

Gene position: 491792-493336 (Clockwise)

Preceding gene: 218234222

Following gene: 218233449

Centisome position: 9.08

GC content: 36.31

Gene sequence:

>1545_bases
ATGAGAGTGTCAGTTGTTATTCCAGTGCATAATGAAGCAAGTACTTTATCAAAAGTTTTAGTAGAGGTAAGAAAGCTCGA
ACCATATGAAGTTATCATAGTAGATAATGGATCGACAGATGGGACGAAGGAAATAGCATTACAGCATAATTGCCGTGTGA
TTTATTATAGATATTCTCTTGGTAATGATGTGGGACGGGCAATTGGTGCTAGAGAAGCAAAAGGCGAGATTGTTTTGTTT
TTAGATGGTGATATCGTCATGAAAAGTGAAGAATTATACAATTTTATTAAAGGAATACGACAAGGACATGAGATTGTTTT
AAATAATTTAACATGGTCCGTTTACTTGAAGATGAGACCGCATTATACGACGGTTGGAAAATATATGTTAAATCGTTATT
TGAACAAGAAAGAGTTTGTTGTAGGATCTTTAATTGCAATACCACATGCGATAAGTCGTAAAGTGATTGAAAAACTGGGG
TGGTGGAATTTAGCAGATCCAGCATTATTTCAAGCGATGGCGATGTCTAGAGGAGTAGATATTTCTGATATGGCTTCAGT
TGATGTCATCTACACAAATAAAGTTCGTCCTGTGCATACTGGTACATCACCTGGCTCTCCTTATCCGAAAGCGACTAGTC
GTATTATGGGTGATCATTTACGAGCTTTACAATACGTAATCGAAACATATGGTAAACGCGGTGGTTTTTCAGAGGACAAT
AGAGATAGAGAGTTTGTAGGAAAGTATAAACCAGTTTTATTACAAAAGAATAAAGCGAAATATAGTGCCATTATCCCAGT
ATCAGAAGAGAAAATGACCATAAGGTCTGTTATAAAAGAAGTGAAAGAAGCAGGTGTAGATGAAATTATAGTTGTCGCGA
ATGGAGCAGATGTTGAGACTGTTAAACAGGCAAAGCTAGAGAATGTTATTGTTGTTGAATTTACGAAGGCGCTTGGACAT
AATGTAGCACGAGCAATAGGTGCCATGCATGCTACGGCAGATATTTGTTTATTCGTTGATAGTGATCTTGTTATTCCAGC
AAAAAAACTCACTCTATTTTTACATGCTGTTGAAGATGGAAATGACGTGGTGTTAAATGATTTACAATGCTTATTAGATA
TGTTTCATCCAGCAGATCCAATTAGTATGGGAAAATACTTTGTGAATTTGATAGCGAAACGACCAGATTTATGGAATAAC
TCACTAACTGCTGTACCACATGCCATTCATAAGAAGGTAATAGAGAAAATAGGATATGATTCCCTTATCATTCCGCCATT
AGCACAAGTGAAAGCTATTTTAGAAGGATTCTCTATTACAACAGTAGAGTTAGTAGATGTTATAAAAACAAATCGAGTAC
GTCCAGAGCAACACGAATTTGTAAATGGGCGTATTTCAGCGTTTGATCGTATTTTCGGTGATCAACTTGAAGCGGTTGCG
TATTTATTACAATGTACGGACGAACGTGGTGGTTTTACAGATGGAGATAGAGATAGAGATGTAATTCAACAATTGAGAAG
GGAAGAAGAGAATACAAATGAATAG

Upstream 100 bases:

>100_bases
ATTGTTCGTACTTCTCCTTCTTATGGACCACCAGAAGATGTAGTTGTGCGTATTCCTATTATTGCTTATGTTCGCTTGGA
AGGGTAAGAGTGATACAAGT

Downstream 100 bases:

>100_bases
TAGTAAAGTAGCTATTATTGGGCTAGGGTATGTTGGCCTTCCTTTAGCGGTACATTTTGCAGAAAGAGGGCATACAGTAC
TTGGATTAGATAAAGATATT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase/Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Sugar Transferase; Glycosyl Transferase Group 2 Family; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MRVSVVIPVHNEASTLSKVLVEVRKLEPYEVIIVDNGSTDGTKEIALQHNCRVIYYRYSLGNDVGRAIGAREAKGEIVLF
LDGDIVMKSEELYNFIKGIRQGHEIVLNNLTWSVYLKMRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISRKVIEKLG
WWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPGSPYPKATSRIMGDHLRALQYVIETYGKRGGFSEDN
RDREFVGKYKPVLLQKNKAKYSAIIPVSEEKMTIRSVIKEVKEAGVDEIIVVANGADVETVKQAKLENVIVVEFTKALGH
NVARAIGAMHATADICLFVDSDLVIPAKKLTLFLHAVEDGNDVVLNDLQCLLDMFHPADPISMGKYFVNLIAKRPDLWNN
SLTAVPHAIHKKVIEKIGYDSLIIPPLAQVKAILEGFSITTVELVDVIKTNRVRPEQHEFVNGRISAFDRIFGDQLEAVA
YLLQCTDERGGFTDGDRDRDVIQQLRREEENTNE

Sequences:

>Translated_514_residues
MRVSVVIPVHNEASTLSKVLVEVRKLEPYEVIIVDNGSTDGTKEIALQHNCRVIYYRYSLGNDVGRAIGAREAKGEIVLF
LDGDIVMKSEELYNFIKGIRQGHEIVLNNLTWSVYLKMRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISRKVIEKLG
WWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPGSPYPKATSRIMGDHLRALQYVIETYGKRGGFSEDN
RDREFVGKYKPVLLQKNKAKYSAIIPVSEEKMTIRSVIKEVKEAGVDEIIVVANGADVETVKQAKLENVIVVEFTKALGH
NVARAIGAMHATADICLFVDSDLVIPAKKLTLFLHAVEDGNDVVLNDLQCLLDMFHPADPISMGKYFVNLIAKRPDLWNN
SLTAVPHAIHKKVIEKIGYDSLIIPPLAQVKAILEGFSITTVELVDVIKTNRVRPEQHEFVNGRISAFDRIFGDQLEAVA
YLLQCTDERGGFTDGDRDRDVIQQLRREEENTNE
>Mature_514_residues
MRVSVVIPVHNEASTLSKVLVEVRKLEPYEVIIVDNGSTDGTKEIALQHNCRVIYYRYSLGNDVGRAIGAREAKGEIVLF
LDGDIVMKSEELYNFIKGIRQGHEIVLNNLTWSVYLKMRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISRKVIEKLG
WWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPGSPYPKATSRIMGDHLRALQYVIETYGKRGGFSEDN
RDREFVGKYKPVLLQKNKAKYSAIIPVSEEKMTIRSVIKEVKEAGVDEIIVVANGADVETVKQAKLENVIVVEFTKALGH
NVARAIGAMHATADICLFVDSDLVIPAKKLTLFLHAVEDGNDVVLNDLQCLLDMFHPADPISMGKYFVNLIAKRPDLWNN
SLTAVPHAIHKKVIEKIGYDSLIIPPLAQVKAILEGFSITTVELVDVIKTNRVRPEQHEFVNGRISAFDRIFGDQLEAVA
YLLQCTDERGGFTDGDRDRDVIQQLRREEENTNE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57629; Mature: 57629

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSVVIPVHNEASTLSKVLVEVRKLEPYEVIIVDNGSTDGTKEIALQHNCRVIYYRYSL
CEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHEEEECCCEEEEEEECC
GNDVGRAIGAREAKGEIVLFLDGDIVMKSEELYNFIKGIRQGHEIVLNNLTWSVYLKMRP
CCHHHHHHCCCCCCCCEEEEECCCEEECHHHHHHHHHHHHCCCCEEEECCEEEEEEEECC
HYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISRKVIEKLGWWNLADPALFQAMAMSRGVD
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
ISDMASVDVIYTNKVRPVHTGTSPGSPYPKATSRIMGDHLRALQYVIETYGKRGGFSEDN
HHHHCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RDREFVGKYKPVLLQKNKAKYSAIIPVSEEKMTIRSVIKEVKEAGVDEIIVVANGADVET
CCHHHHHCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
VKQAKLENVIVVEFTKALGHNVARAIGAMHATADICLFVDSDLVIPAKKLTLFLHAVEDG
HHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHEEEEEEEECCC
NDVVLNDLQCLLDMFHPADPISMGKYFVNLIAKRPDLWNNSLTAVPHAIHKKVIEKIGYD
CCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
SLIIPPLAQVKAILEGFSITTVELVDVIKTNRVRPEQHEFVNGRISAFDRIFGDQLEAVA
CEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
YLLQCTDERGGFTDGDRDRDVIQQLRREEENTNE
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVSVVIPVHNEASTLSKVLVEVRKLEPYEVIIVDNGSTDGTKEIALQHNCRVIYYRYSL
CEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHEEEECCCEEEEEEECC
GNDVGRAIGAREAKGEIVLFLDGDIVMKSEELYNFIKGIRQGHEIVLNNLTWSVYLKMRP
CCHHHHHHCCCCCCCCEEEEECCCEEECHHHHHHHHHHHHCCCCEEEECCEEEEEEEECC
HYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISRKVIEKLGWWNLADPALFQAMAMSRGVD
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
ISDMASVDVIYTNKVRPVHTGTSPGSPYPKATSRIMGDHLRALQYVIETYGKRGGFSEDN
HHHHCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RDREFVGKYKPVLLQKNKAKYSAIIPVSEEKMTIRSVIKEVKEAGVDEIIVVANGADVET
CCHHHHHCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
VKQAKLENVIVVEFTKALGHNVARAIGAMHATADICLFVDSDLVIPAKKLTLFLHAVEDG
HHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHEEEEEEEECCC
NDVVLNDLQCLLDMFHPADPISMGKYFVNLIAKRPDLWNNSLTAVPHAIHKKVIEKIGYD
CCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
SLIIPPLAQVKAILEGFSITTVELVDVIKTNRVRPEQHEFVNGRISAFDRIFGDQLEAVA
CEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
YLLQCTDERGGFTDGDRDRDVIQQLRREEENTNE
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA