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The map label for this gene is ywcH [H]

Identifier: 218234505

GI number: 218234505

Start: 1928968

End: 1929969

Strand: Reverse

Name: ywcH [H]

Synonym: BCB4264_A2018

Alternate gene names: 218234505

Gene position: 1929969-1928968 (Counterclockwise)

Preceding gene: 218233765

Following gene: 218231568

Centisome position: 35.61

GC content: 38.12

Gene sequence:

>1002_bases
ATGATCAAGTTAAGTGTATTAGACCAATCACCTATTTCAGATGGTAGCACAGCAGCCCAAGCTTTTTCACATACAGTTAC
GCTTGCACAAGAAGTTGAAAAACTCGGATTCACACGTTTTTGGGTATCCGAACATCATAATTCCGTAAGCTTAGCTGGTT
CAAGTCCAGAAATACTTATTTCTCATATTGCCGCAAAAACGGACCGTATTAGAGTCGGTTCAGGTGGTGTTATGTTACCG
CATTATAGCCCATATAAAGTTGCTGAGAATTTCCGTGTTCTAGAAGCATTGTATCCGAACCGCATCGATCTCGGTGTTGG
TAGAGCTCCTGGTGGTATGCCAATAGCAACTCGCGCACTTCAAGAAGGGAAAATGGTCTCACTTGATCAATATCCAGAAC
AAATTGCAGACGTTGCAATGTACTTACATGATCAAGTACCAGAAAACCATCACTATGCAAACTTAAAAGCCACTCCAGTT
ATCCCAACGTCTCCTGAAATGTGGATGCTCGGTTCTAGCGGAGAGAGCGCTAAAATTGCTGCAAACAACGGAGCTTCTTT
CGCATTTGCACAATTTATTAACGGCTTTGGAGGCCCTGAAGTTATGAGGGCTTACCAAGAACAATATCAGCCTTCATTTT
TAGGAGATAAGCCTAATTCAATCGTTGCCATCTTTGTTATATGCGGAGAAACAAATGAAGAAGCGGAAAAAATTGCTTCT
AGTTTAGATTTATCAATCTTATTATTAGAGCAAGGAAAACGAACTACTGGTACACCTTCTATTGAAACTGCTCAAAATTA
TTCATACAGCGCTTATGATTTATTCCGTATAAAAGAAAATCGTCAACGTATGATTGTTGGTGATCCGTCTTCTGTAAAAG
AAAAAATAATAAACTTAAGCAAAGCATACAATACTGACGAATTTATGATTGTCACGATTACTCATCAATTTGAACATAAA
TTAAAGTCTTATCGCTTATTAGCAAATGCTTTTAATTTATAA

Upstream 100 bases:

>100_bases
GGAAATAAGATTATCCGCTTTTCATTTTGAGCATTTCACTACGCATTTTTCATAAGTAAATATATAATAGGATGTACATT
AAGATTGAGAGGTATATTCT

Downstream 100 bases:

>100_bases
TTCTAAAAAGAGATGCATCACATGTGATGCATCTCTTTTTCTTACTACTTATTGTTTTCATTTCCTATATATTCAATAGC
TTCTTTTAATAGCTCTTCAA

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIKLSVLDQSPISDGSTAAQAFSHTVTLAQEVEKLGFTRFWVSEHHNSVSLAGSSPEILISHIAAKTDRIRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPEMWMLGSSGESAKIAANNGASFAFAQFINGFGGPEVMRAYQEQYQPSFLGDKPNSIVAIFVICGETNEEAEKIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYDLFRIKENRQRMIVGDPSSVKEKIINLSKAYNTDEFMIVTITHQFEHK
LKSYRLLANAFNL

Sequences:

>Translated_333_residues
MIKLSVLDQSPISDGSTAAQAFSHTVTLAQEVEKLGFTRFWVSEHHNSVSLAGSSPEILISHIAAKTDRIRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPEMWMLGSSGESAKIAANNGASFAFAQFINGFGGPEVMRAYQEQYQPSFLGDKPNSIVAIFVICGETNEEAEKIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYDLFRIKENRQRMIVGDPSSVKEKIINLSKAYNTDEFMIVTITHQFEHK
LKSYRLLANAFNL
>Mature_333_residues
MIKLSVLDQSPISDGSTAAQAFSHTVTLAQEVEKLGFTRFWVSEHHNSVSLAGSSPEILISHIAAKTDRIRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPEMWMLGSSGESAKIAANNGASFAFAQFINGFGGPEVMRAYQEQYQPSFLGDKPNSIVAIFVICGETNEEAEKIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYDLFRIKENRQRMIVGDPSSVKEKIINLSKAYNTDEFMIVTITHQFEHK
LKSYRLLANAFNL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=32.6153846153846, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36719; Mature: 36719

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSVLDQSPISDGSTAAQAFSHTVTLAQEVEKLGFTRFWVSEHHNSVSLAGSSPEILI
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHH
SHIAAKTDRIRVGSGGVMLPHYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRAL
HHHHCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
QEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPVIPTSPEMWMLGSSGESAKIA
HCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCCCCCEEEEECCCCCEEEE
ANNGASFAFAQFINGFGGPEVMRAYQEQYQPSFLGDKPNSIVAIFVICGETNEEAEKIAS
ECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYDLFRIKENRQRMIVGDPSSVKEKIINLS
HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
KAYNTDEFMIVTITHQFEHKLKSYRLLANAFNL
HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLSVLDQSPISDGSTAAQAFSHTVTLAQEVEKLGFTRFWVSEHHNSVSLAGSSPEILI
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHH
SHIAAKTDRIRVGSGGVMLPHYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRAL
HHHHCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
QEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPVIPTSPEMWMLGSSGESAKIA
HCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCCCCCEEEEECCCCCEEEE
ANNGASFAFAQFINGFGGPEVMRAYQEQYQPSFLGDKPNSIVAIFVICGETNEEAEKIAS
ECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYDLFRIKENRQRMIVGDPSSVKEKIINLS
HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
KAYNTDEFMIVTITHQFEHKLKSYRLLANAFNL
HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]