Click here to switch to the map view.

The map label for this gene is nrdI [H]

Identifier: 218234446

GI number: 218234446

Start: 1356563

End: 1356922

Strand: Direct

Name: nrdI [H]

Synonym: BCB4264_A1404

Alternate gene names: 218234446

Gene position: 1356563-1356922 (Clockwise)

Preceding gene: 218233732

Following gene: 218232459

Centisome position: 25.03

GC content: 36.39

Gene sequence:

>360_bases
ATGTTAGTTGCATATGATTCTATGACAGGAAACGTGAAGCGTTTCATTCACAAATTAAATATGCCGGCCGTTCAAATTGA
TGAAGATCTAGTAATAGATGAAGACTTTATTCTTATTACGTATACAACAGGTTTTGGCAATGTACCAGAACGTGTTTTAG
ACTTTTTAGAGCGCAATAATGAAAAATTAAAAGGCGTATCTGCAAGCGGCAATCGTAACTGGGGAGACATGTTCGGTGCA
AGTGCTGACAAGATTTCTACTAAATATGAAGTGCCTATTGTATCAAAATTTGAGTTATCTGGAACAAATAACGATGTAGA
ATATTTTAAGGAAAGGGTGCGGGAGATTGCGACACATTGA

Upstream 100 bases:

>100_bases
TTATACATATATCTTGTGTCTTATTTTGAAACGTAATACAATATATAGAGAAATCAAGAACAACATATAGAGAATATAGA
TTTGAGAGGGAGGGTCGGAA

Downstream 100 bases:

>100_bases
ACTGAATAATGAAATCACGCAAATGCAGGACGGTTTTTATCAGCTTCATAAAGATAAAGAGGCATTAGAAGTCTTTATGG
AAGAAGCTAGAGAGAATACC

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLVAYDSMTGNVKRFIHKLNMPAVQIDEDLVIDEDFILITYTTGFGNVPERVLDFLERNNEKLKGVSASGNRNWGDMFGA
SADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIATH

Sequences:

>Translated_119_residues
MLVAYDSMTGNVKRFIHKLNMPAVQIDEDLVIDEDFILITYTTGFGNVPERVLDFLERNNEKLKGVSASGNRNWGDMFGA
SADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIATH
>Mature_119_residues
MLVAYDSMTGNVKRFIHKLNMPAVQIDEDLVIDEDFILITYTTGFGNVPERVLDFLERNNEKLKGVSASGNRNWGDMFGA
SADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIATH

Specific function: Probably involved in ribonucleotide reductase function [H]

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family [H]

Homologues:

Organism=Escherichia coli, GI1789029, Length=125, Percent_Identity=41.6, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020852
- InterPro:   IPR004465 [H]

Pfam domain/function: PF07972 Flavodoxin_NdrI [H]

EC number: NA

Molecular weight: Translated: 13523; Mature: 13523

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAYDSMTGNVKRFIHKLNMPAVQIDEDLVIDEDFILITYTTGFGNVPERVLDFLERNN
CEEEECCCCCHHHHHHHHHCCCEEEECCCEEECCCEEEEEEECCCCCCHHHHHHHHHCCC
EKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIATH
CCEECCCCCCCCCCHHHCCCCCCCCCCEECCCEEEEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVAYDSMTGNVKRFIHKLNMPAVQIDEDLVIDEDFILITYTTGFGNVPERVLDFLERNN
CEEEECCCCCHHHHHHHHHCCCEEEECCCEEECCCEEEEEEECCCCCCHHHHHHHHHCCC
EKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIATH
CCEECCCCCCCCCCHHHCCCCCCCCCCEECCCEEEEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA