| Definition | Bacillus cereus B4264, complete genome. |
|---|---|
| Accession | NC_011725 |
| Length | 5,419,036 |
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The map label for this gene is ygfF [C]
Identifier: 218234438
GI number: 218234438
Start: 3077650
End: 3078414
Strand: Reverse
Name: ygfF [C]
Synonym: BCB4264_A3195
Alternate gene names: 218234438
Gene position: 3078414-3077650 (Counterclockwise)
Preceding gene: 218230942
Following gene: 218233295
Centisome position: 56.81
GC content: 38.82
Gene sequence:
>765_bases ATGAAGAATCTTGATGGGAAAGTAGCGTTAGTAACAGGAGCGAGTCGAGGAATTGGTCGTGCGATTGCAATGAGATTGGC AAACGACGGTGCATTAGTTGCGATTCACTACGGTCGAAATAAGGCAGCTGCAGATGAAACGATTAGTGAGATTGAATCTA ATGGAGGAAAAGCATTCTTAATTGAAGCTGAACTCAATTCAATTGATGGTGTCAAGAAGCTAGTAGAACAGTTAAAGCAT GAATTACAAATAAAAGTTGGTACATCAGAGATTGATATTTTAGTAAACAATGCAGGGATAGGTACACAAGGAACGATTGA AAATACGACAGAAGAAGTTTTTGATGAAATTATGTCTGTAAATATGAAAGCACCATTCTTTTTAATCCAGCAAACATTAC CGTTACTACGAGTAGAAGGGCGCGTTATTAACATTTCATCAGCGGAAGTAAGACTTGGTTTTACAGGGTCCATTGCATAC GGTTTAAGTAAAGGTGCACTAAATACGATGACACTTCCTCTAGCTAAACATCTTGGAGAACGAGGTATAACAGTGAATAC AATTATGCCTGGATATACGAAGACAGATATCAATGCGAAATTGCTAGATGATCCGGAAATACGAAATTTTGCTACGAATT CATCTGTGTTCGGGCGAATAGGGCAAGTTGAAGATATTGCAGATACAGTAGCATTCCTTGCTTCTTCTGATAGCCGCTGG GTAACAGGGCAGATTATAGATGTTTCTGGAGGGTTTTGTTTATAG
Upstream 100 bases:
>100_bases GACTAAATTACCTATAAATCTATATTTAAAATGATTGGTGTTTACATGAAAATATAAGTATAGGTTTTTATCAAACGGAA ATTTAGGAAGGATGGAAAAA
Downstream 100 bases:
>100_bases GGGCACTACTTCATAACCAGTAATCTATAGAAAGGTAGGGATGATAAAGAAGTCTATTAAAACGTGATTTTTTCGCTAGG CAATTTGAATAAGGGGGCAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETISEIESNGGKAFLIEAELNSIDGVKKLVEQLKH ELQIKVGTSEIDILVNNAGIGTQGTIENTTEEVFDEIMSVNMKAPFFLIQQTLPLLRVEGRVINISSAEVRLGFTGSIAY GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADTVAFLASSDSRW VTGQIIDVSGGFCL
Sequences:
>Translated_254_residues MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETISEIESNGGKAFLIEAELNSIDGVKKLVEQLKH ELQIKVGTSEIDILVNNAGIGTQGTIENTTEEVFDEIMSVNMKAPFFLIQQTLPLLRVEGRVINISSAEVRLGFTGSIAY GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADTVAFLASSDSRW VTGQIIDVSGGFCL >Mature_254_residues MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETISEIESNGGKAFLIEAELNSIDGVKKLVEQLKH ELQIKVGTSEIDILVNNAGIGTQGTIENTTEEVFDEIMSVNMKAPFFLIQQTLPLLRVEGRVINISSAEVRLGFTGSIAY GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADTVAFLASSDSRW VTGQIIDVSGGFCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=34.6613545816733, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=34.2629482071713, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=34.8484848484849, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI209862901, Length=227, Percent_Identity=29.9559471365639, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI19923983, Length=227, Percent_Identity=29.9559471365639, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=28.6274509803922, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=30.3149606299213, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI40254992, Length=250, Percent_Identity=28, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI66933014, Length=264, Percent_Identity=30.3030303030303, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=31.9796954314721, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI19923817, Length=269, Percent_Identity=26.0223048327138, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI20149619, Length=203, Percent_Identity=30.0492610837438, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI59889578, Length=219, Percent_Identity=30.5936073059361, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=32.4468085106383, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI40807363, Length=204, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4758504, Length=264, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI40254986, Length=212, Percent_Identity=30.6603773584906, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=34.9206349206349, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI1787335, Length=257, Percent_Identity=35.408560311284, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1789208, Length=256, Percent_Identity=32.8125, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=32.6771653543307, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=32.0158102766798, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=29.0196078431373, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=32.1428571428571, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=34, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=29.2490118577075, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1786812, Length=263, Percent_Identity=31.1787072243346, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI87082100, Length=266, Percent_Identity=29.6992481203008, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787526, Length=256, Percent_Identity=30.859375, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=26.5151515151515, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=38.5214007782101, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=32.8063241106719, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=31.6205533596838, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=34.3173431734317, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI25147288, Length=260, Percent_Identity=31.1538461538462, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=32.2344322344322, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=30.8300395256917, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=30.5220883534137, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562906, Length=277, Percent_Identity=34.2960288808664, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=29.5275590551181, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=33.695652173913, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17555612, Length=262, Percent_Identity=32.4427480916031, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=32.4817518248175, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=28.996282527881, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI193204405, Length=277, Percent_Identity=32.8519855595668, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=30.4347826086957, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17559104, Length=271, Percent_Identity=30.6273062730627, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538480, Length=278, Percent_Identity=30.9352517985612, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=30.2583025830258, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=30.7116104868914, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17564282, Length=199, Percent_Identity=31.6582914572864, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI86565303, Length=239, Percent_Identity=28.8702928870293, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71982365, Length=196, Percent_Identity=34.6938775510204, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17538486, Length=277, Percent_Identity=29.6028880866426, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560332, Length=274, Percent_Identity=31.3868613138686, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562904, Length=280, Percent_Identity=28.9285714285714, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71997099, Length=239, Percent_Identity=30.9623430962343, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=30.3482587064677, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=31.4606741573034, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=28.5185185185185, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=30.9644670050761, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI72001658, Length=209, Percent_Identity=29.6650717703349, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17565030, Length=276, Percent_Identity=29.3478260869565, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=28.90625, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193203115, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17508651, Length=261, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558628, Length=196, Percent_Identity=30.1020408163265, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=27.4111675126904, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=26.2745098039216, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=30.2681992337165, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17538182, Length=225, Percent_Identity=32.4444444444444, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71997402, Length=251, Percent_Identity=24.7011952191235, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17567345, Length=202, Percent_Identity=24.7524752475248, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=29.7435897435897, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=206, Percent_Identity=31.0679611650485, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322226, Length=201, Percent_Identity=29.8507462686567, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=36.6141732283465, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=35.9073359073359, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=36.6141732283465, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=35.1351351351351, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=34.5098039215686, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=34.5098039215686, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24643142, Length=256, Percent_Identity=31.25, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI24644337, Length=167, Percent_Identity=34.7305389221557, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24640492, Length=210, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=254, Percent_Identity=26.7716535433071, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI18859837, Length=197, Percent_Identity=31.9796954314721, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17737361, Length=260, Percent_Identity=28.4615384615385, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI161076371, Length=213, Percent_Identity=30.5164319248826, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI45554248, Length=215, Percent_Identity=32.093023255814, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640117, Length=215, Percent_Identity=32.093023255814, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358495, Length=204, Percent_Identity=27.9411764705882, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24649181, Length=203, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI28573296, Length=234, Percent_Identity=29.0598290598291, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI281364892, Length=215, Percent_Identity=26.9767441860465, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27150; Mature: 27150
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETISEIESNGGKAFL CCCCCCCEEEEECCCCCCCHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEE IEAELNSIDGVKKLVEQLKHELQIKVGTSEIDILVNNAGIGTQGTIENTTEEVFDEIMSV EEECCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHC NMKAPFFLIQQTLPLLRVEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE CCCCCCHHHHHCCCEEEECCEEEEEECCEEEEEECCEEECCCCCCCCHHEEHHHHHHCCC RGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADTVAFLASSDSRW CCCEEEEECCCCEECCCCEEECCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCE VTGQIIDVSGGFCL EEEEEEEECCCCCC >Mature Secondary Structure MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETISEIESNGGKAFL CCCCCCCEEEEECCCCCCCHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEE IEAELNSIDGVKKLVEQLKHELQIKVGTSEIDILVNNAGIGTQGTIENTTEEVFDEIMSV EEECCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHC NMKAPFFLIQQTLPLLRVEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE CCCCCCHHHHHCCCEEEECCEEEEEECCEEEEEECCEEECCCCCCCCHHEEHHHHHHCCC RGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADTVAFLASSDSRW CCCEEEEECCCCEECCCCEEECCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCE VTGQIIDVSGGFCL EEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8868443 [H]